Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->LBD16                                                                 ------>NtERF2                                                               ------>ZmHOX2a(2)                                                              --------->CCA1(2)                                                             --------->ARR11(1)                                                             --------->ARR14(2)                                                             --------->ARR11(3)                                                             <---------ARR14(2)                                                             <---------ARR11(3)                                                     --------->MYB52(1)                                                     <---------DOF5.7(2)                                                    ----------->HVH21                                                   --------->DOF5.7(2)             <---------ARR14(2)                    <---------MYB52(2)             --------->ARR14(2)                   --------->At4g35610             <---------GLK1(2)                    <---------At4g35610        --------->MYB52(1)                      <-----------------AGL1 <---------LBD16  ----------->GT1              --------->RAP2.6(3) ---------->RAV1(2)    <-----------GT1     --------->ANAC55(2)--------->ARR14(1) ------>P<---------LBD16      <---------ZAT18----------->HVH21<------ZmHOX2a(2)           --------->YAB1 ------->HVH21  <---------LBD16          <-----------GT1  <--------P                     <---------YAB1 -----MYB59--------->LBD16--------->ATHB12 <---------AtLEC2  --------->AGP1              --------->ICU4 -----------AGL15 --------->LBD16        <---------AHL20(2)----------->ARR10          <---------MYB52(1) -----MYB46(2)--------->GLK1(2)      <---------AHL20(2)  --------->At5g28300         <-------GAMYB ----------->AGL1<---------ANAC46    --------->AHL20(2) ------->GAMYB           ----------->HVH21   taacctggaaaaccggattccggttaaaccattgcacatttatttacatgaccgctaacggtagatccgccgttttagactggtgactgttatgattatc  19711300                                                                      <---------ANAC58                               <-----------GT1                        <---------ANAC58                              <---------YAB1                          --------->ANAC55(2)                            <---------ICU4                    ------>ZmHOX2a(1)                            --------->YAB1          --------->DOF5.7(2)                           <---------YAB1          --------->TOE1(3) <---------TOE2(3)                        <---------YAB1             --------->TOE2(3)<-----------GT1                  --------->AHL20(2)       <-----------GT1   <---------MYB59        --------->ANAC46                 <---------MYB52(1)    <----------DOF2<---------DOF5.7(2)   <----------DOF2   taatatcgcattcaattccattaattctcattataactcttcttttaatctttcgttaacattcctaattttacgtttcttttcccacaaaaccagtttt  19711400                                                      --------->AHL20(2)                                                     <---------YAB1                                                   <--------HAHB4                                                   --------->ATHB51                                                   --------->YAB1                                                   <---------ICU4                                                   -------->HAHB4                                                   -------->ATHB1                                                   <---------AHL20(2)                                                  --------->ICU4                                                  <---------ATHB51               <---------YAB1                     <---------YAB1                        --------->LBD16             <---------AHL20(2)                 --------->YAB1                      -------->P             --------->AHL20(2)                --------->AHL20(2)                  <-----------GT1       <---------TOE2(3)                       <---------AHL20(2)             --------->AHL20(2)      <-----------GT1                        <----------DOF2                  <---------AHL20(2)      --------->MYB52(1)                  <---------ARR11(3)             ------>ZmHOX2a(2)     ------   --------->TOE2(3)      ----------->GT1 --------->ARR11(3)----------->GT1 <----------DOF2   -------   taaaaacttaacgatttatatttgtttagggaaaattagtataagagctttaattattaaacaagttatatatgatccctttaattaacccgtagataaa  19711500                       --------->bZIP60(2)                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46               <-------PIF5               ------->PIF5              --------->ZAT2              <---------ZAT2              ----------->RAV1(2)              --------->At4g35610                                               <---------AHL20(2)             ------>NtERF2                                                     --------->AHL20(2)            <---------ALFIN1                                                   <---------AHL20(2)           --------->MYB46(3)               <---------MYB46(3)             --------->AHL20(2)      --     <-----------GT1 <---------ALFIN1       --------->MYB52(2)             <---------AHL20(2)  ------ --->DAG2  <---------MYB55(2)          <---------TOE2(3)               <---------AHL20(2)    -------- --->DOF2--------->ANAC46   <---------YAB1<---------MYB52(1)           --------->AHL20(2)----------->GT1   gcaaatgaaaccccccacctgcaccacgttattagtctattgacgttagttcatatacttaagtgaaacttatttttttaattaaatcgtgttgtaaaag  19711600          <-------GAMYB                                                                           <--         <---------ANAC46                                                                         ---    <---------ARR14(2)                                           <-----------HVH21               <---    --------->ARR14(2)                                         --------->MYB59                 <-----    ------->TEIL<----------DOF2  ---------->DOF2          <---------AHL20(2)                   ------ ------->MYB52(1)           <---------YAB1              --------->TOE2(3)                      <----- --->DAG2<---------ANAC58<---------YAB1                 <----------DOF2                      -------- -->DOF2 <---------ANAC58<---------AHL20(2) <---------ICU4--------->AHL20(2)           <---------ANAC46   gcaacgaatttgcgttgtctttttttttttattagtaaagaaatagtcatttcattttctttaattcggtcacaagtctcttgacattttcgtctatata  19711700       <---------YAB1     <---------ZAT6    <---------YAB1                                                        --------->YAB1            < -------AHL20(1)                                       ---------->DOF2 --------->KAN4(2)            - ------>AHL20(1)                                    --------->ANAC58   --------->YAB1             --- ------AHL20(2)                                <------ZmHOX2a(2)       <---------ICU4             <-- ------TBP               *TSS                 <---------ARR11(3)      --------->KAN4(1)          ---- --->AHL20(2)         <------ZmHOX2a(2)       --------->ARR11(3)      <---------KAN4(1)          <--- ----AHL20(2)--------->ANAC58             ---------->DOF2        --------->YAB1                 <---- --->TBP     --------->ANAC58       ---------->DOF2 --------->ANAC58 <---------KAN4(2)---------->DOF2   tatattagtattatcaagaaaacgatccatcttcgagggaaagagaaagatcacaagaaaagctctctcagaataatcgcaatggcttcaaagctcgtga  19711800                             <-------GAMYB                            <-----------RAV1(1)                            <---------MYB46(3) --------->ATHB12    <---------YAB1 <---------ICU4     ------>ZmHOX2a(2)                               <---------SPL7 ---------YAB1     <------ZmHOX2a(2)                               <---------ANAC58 -------->ICU4    <---------ARR11(3)                               ----------->GT1 ------>YAB1      --------->ARR11(3)                               <---------ANAC46 -------ICU4      <---------AGP1                                   <---------ANAC58 ----->ICU4      <---------CCA1(2)                    ---------->DOF2    <---------ICU4 ------YAB1    --------->HSFB2a(2)             ------>NtERF2   <---------HSFC1(2) -----ARR11(3) <---------HSFB2a(2)           <---------RAP2.6(2)--------->ALFIN1--------->ZAT14   tcatcattgtgttcattctagatctcattgctgttggattagccattgctgccgaacaaagaagaagtgtcgtaagaatcacttctctctctctctctct  19711900                                                                      <---------AHL20(2)                              ---------->ID1                        <---------------AGL15                <----------DOF2                                     --------------->AGL15               <------------------------ANAC81                      <----------DOF2            <-----         <-----------GT1  <---------ANAC58                         <-----------------AGL3 --------->CCA1(2)       <----------DOF2    <---------ANAC58                         <---------ICU4        --------->ARR11(3)   ---------->ID1      <---------GLK1(1)                          --------->ICU4        <------ZmHOX2a(1)   aatttgtttctttactctcttttagatttcttgttctcttgaagtcaaattttggtgatgagattgtaatctttatttggaacatatgtaggatatagtg  19712000                                                                                  --------->ARR11(3)                                                                     --------->AGP1                                               <---------ANAC58      <---------ARR11(3)                                     <---------DEAR3(2)              <---------AGP1                                    <---------DEAR3(1)               <---------ARR14(2)                                    <---------DEAR4(1)               --------->ARR14(2)                                    <---------DREB2C(2)      <----------DOF2      --------->GLK1(2)                                    <---------At1g77200--------->ZAT14           <---------GLK1(2)                                    --------->ETT(1)   <---------ZAT18 ------>ZmHOX2a(2)                  <---------------AtSPL8       <---------ANAC46      --------->ARR11(3)          ----                  --------------->AtSPL8       <---------ANAC58     <---------CCA1(2)           <----    <----------DOF2               <-----------HVH21    <---------ZAT14--------->CCA1(2)    <---------ANAC58 ----ZAT6  <---------ATHB12      <-----------RAV1(1)   --------->ZAT18<------ZmHOX2a(2)    <---------ANAC58   ttttgactttcaaatcagttttggtacaaaaatatgtgtcggtgcgatttcttgtagtggactctttctcagatctgattcaagaatcttgtttcttgat  19712100                                       <----------DOF2                              <----------DOF2                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           <-----------ARR10                           --------->ARR14(3)                                     <------ZmHOX2a(2)                           <---------ARR14(2)                                     <---------GLK1(1)                           --------->ARR14(2)                                    <---------AGP1                           <---------ARR11(3)                    <---------ANAC58<---------ARR11(3)      --------->At4g35610  <---------ARR14(3)   <----------DOF2  <---------ANAC58--------->ARR11(3)      <---------At4g35610  --------->ARR11(3)<---------ARR11(3) <---------At4g35610     <---------GLK1(2) -->ZmHOX2a(2)             <---------AGP1    --------->ARR11(3) --------->At4g35610------>ZmHOX2a(2) -----WOX13(1)   <---------YAB1  --------->REM1(2)      --------->CCA1(2)       <---------CCA1(2)   cgatatggagcttcacattgtgatttgaagatctttgtagactttaagacctttgtagataagcgtagcttactacattgttagatctcagattagtggt  19712200  Previous    Next  AGI:  At1g52910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15480.1); similar to unknown [Populus trichocarpa] (GB:ABK94458.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 19711725    to: 19712991    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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