Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->YAB1                                                                --------->AHL20(2)           --------                                                   ---------->DOF2                           --------                                          --------->YAB1       <---------ATHB12            <---------                                         <---------ATHB12    --------->WOX13(1)      --------->ANAC58                           --------->ARR11(3)    --------->ANAC46               ---------->DOF2<-----        --------->AHL20(2) --------->GLK1(2)     --------->ANAC58--------->AHL20(2)  --------->ANAC46     ------->GAMYB         <---------ARR11(3)    --------->ANAC58<---------AHL20(2)  --------->ANAC58    ----------->GT1       --------->RVE1(1) <---------YAB1>>>>>>>>>MYB2       <---------MYB52(2)   aatacaacgaaaaaatacagaaaactaaaaatcttcaaaacaaatgataatacgaaagaaaaccaattaaaatgaaaacaactaaagaagcaactttgac  19709400                                            --------->ANAC58  --------->DAG2                            --------->ANAC58 ---------->DOF2                    <---------ARR14(2) --->HVH21                          --------->KAN4(2) ->WRKY12--------->YAB1           ------->TEIL                                               <------- -DOF2--------->CCA1(2)        <---------YAB1               ------>ZmHOX2a(1)           <---------ANAC46 ----LBD16             <---------ZAT6 <---------At5g28300  --------->TOE2(3)          <---------ANAC46   ggaaaaagctataagaaaactaatagtgttaccatgaatataccgcaaggcaattggccttcctcaatactttggatatatatgtgtattgtggatatat  19709500                                                            -------->P                                                            ------>MYB46(1)                                                         --------->DEAR3(2)              <---------At5g28300               --------->DEAR3(2)             <-----------GT1                  --------->ARR14(2)          <----------DOF2                     <---------ARR14(2)     ------>ZmHOX2a(2)                       <------ZmHOX2a(1)                      <---------MYB52(1)    <------ZmHOX2a(2)                 --------->RAP2.6(3)--------->MYB46(3)        <-------GAMYB   --------->ARR14(2)  <---------ANAC58<---------ANAC55(2)  ------>MYB83----------->GT1   <---------ARR14(2)  <---------ANAC58--------->ANAC46--------->MYB52(1) <---------MYB52(1) ----------AGL3        <---------ANAC46<---------RAP2.6(2)--------->DEAR3(1)<---------ICU4   atgtggatccaacttttacagtttttcgtaggcctgggattacggcaggaaccgagcaaaccgacccgattaaaccgataatttcggttatcggcgaaaa  19709600                                                               <---------ARR14(2)                                                               <---------MYB52(1)                                                               --------->ARR14(2)                    --------->SPL7                           <---------DEAR3(2)                   <---------MYB52(1)                        <------MYB83               <---------At5g28300                           <------MYB46(1)               -------->P                                    <---------MYB46(3)              <-----------GT1                               <---------DEAR3(1)              --------->MYB52(1)                           <--------P            <---------MYB52(2)                            <-----------HVH21            <---------MYB46(2)                          <---------MYB46(3)            <---------MYB111(1)                         <---------DEAR3(2)                <---------AHL20(2)            <---------MYB59                            --------->ETT(1)                   --------->AHL20(2)        --------->At5g28300                          <-----------HVH21                   --------->YAB1       xxxxxxxxxxxxxxxx>smallRNA(s)                 xxxxxxxxxxxxxxxx>smallRNA(s)  ----------->GT1       ----------->GT1                            <---------ANAC46               ------>ZmHOX2a(2)    --------->ARR14(1)        --------->AHL20(2)  <---------ANAC58              <------ZmHOX2a(2)   <---------ARR11(3)         <---------AHL20(2)  <---------ANAC58             <---------ARR14(2)   --------->ARR14(2)        <---------AHL20(2)--------->GLK1(1)             <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------ARR14(2)        --------->AHL20(2)<---------GLK1(1)            --------->DEAR3(2)     --   --------->ARR11(3)<---------DEAR3(1)       <---------ARR14(2)   ------------>CBF     <---------YAB1 ----------->ARR10<---------SPL7              --------->ARR14(2)--------->SPL7 --------->ARR14(2)----   ccgaagatactgtaactaaccgttcggcgaatttaattttggtgttcggatttcgggtcgggtcggttcggcaatcggaccgatcggtttattaaaatat  19709700            --------->TOE1(3)            --------->TOE2(3)           --------->At4g35610                         <---------ZAT14  --------->YAB1               --------->TOE2(3)       --------->ZAT14 <---------ATHB12      ------------>CBF              *TSS <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------ANAC58                  ===============HOX2a_HOX2a ------->WOX13(1) --------->TOE2(3)       <---------AHL20(2)                        ------>ZmHOX2a(1) -------->CBF    --------->ZAT6--------->TOE1(3)  <---------ANAC58    --------->ANAC46      <------ZmHOX2a(2)   gcaatcatatataagcttaaccctagtcaataaccctaatttgttttattttgcttcttcactgcctcttacaaaccaagtgagtccttctccgatctaa  19709800                                                       <---------YAB1                    -------->ATHB1                                                     <---------ICU4                      <---------ICU4                       <---------ICU4               --------->ICU4                       --------->YAB1                       --------->YAB1            --------->AHL20(2)        ------>ZmHOX2a(1) --------                    --------->YAB1        --------->REM1(1)         <----------DOF2     <---------ATHB12              <---------ATHB12          ------>ZmHOX2a(1)          <---------ICU4     --------->WOX13(1)   aaaacattcttctccaatctattcatcatcacatctcttctccttcatcaattcattatcatctattcatctttatcctctaaaaactcaatcattcatg  19709900                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------ANAC55(1)                     ---                                                          --------->ANAC55(2)       <----------DOF2                                                         --------->MYB52(2)     <---------CCA1(2)<---                         --------->TOE2(2)              <-----------GT1       <---------ANAC46  <----                         --------->TOE1(2)     <---------ICU4                 <---------TGA1a   <----                        --------->ANAC58       --------->ATHB12               =================bZIP_DOF                        --------->ANAC58      <---------YAB1                  <---------ANAC58  -----                        --------->ANAC46--------->ARR14(2)<---------ANAC55(2) --------->O2      -----                 ------->TEIL           <---------ARR14(2)<---------ANAC46    --------->TGA1a   -----          <---------HSFB2a(2) --------->ARR11(3)     <---------ZAT6           <---------ANAC58  <---- ->YAB1   ------>ZmHOX2a(1) ----------->ARR10 --------->ICU4                  <---------O2     <-----   tctaaatctgtcctcgacgaacttaaacgtaagatttgttcagatttgattattggtgttacttgtttttttttgtagtctcgtgtctttgttctctaga  19710000        <---------ANAC46    <---------ANAC58    <---------ANAC58 --->ZmHOX2a(2) ---ZmHOX2a(2)                                                               --------->TOE2(3) -----ARR11(3)       <---------AHL20(2)                            ------>MYB46(1) -----AGP1           --------->AHL20(2)                            ------>MYB83 ---->ARR11(3)       <---------ICU4                             --------->DEAR3(2) ---->ARR14(2)       <--------ATHB1                   --------->DAG2       -------->P ---->AGP1           --------->ATHB51  <---------ANAC58       <---------ARR14(2) -----ARR14(2)      <---------ATHB12   <---------ANAC58  <----------ID1    ------->TEIL            -- ----CCA1(2)        <---------ATHB51<----------DOF2  ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   tcttaggcttgtgtttatttcaataatttagttgttttctttcttgtttcagtgagaaagcgagaaaccgactcatcaaccttgtttaatgcaatctcgc  19710100                                                                                    --------->ZAT14                                                                                    <---------REM1(2)                                                                                  --------->ANAC46                                                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                             <------NtERF2                                                                             ----------->HVH21                                                                            <---------RAP2.6(3)                                                                            <-----------HVH21                                                                           --------->DEAR3(1)                                                                           --------->RAP2.3(3)                                                                           --------->ANAC46                                                                           --------->RAP2.6(2)                                                                           --------->RAP2.3(2)                                         <-----------HVH21                --------->RAP2.3(1)                                        --------->RAP2.6(2)              <---------ATERF1(1)                                      ------>NtERF2                      <---------At4g35610                               --------->WRKY12                          ------>NtERF2                              --------->ALFIN1                           --------->ZAT2                             --------->LBD16 <---------At4g35610         --------->At4g35610                            --------->DEAR3(1)--------->DEAR3(1)        --------->DEAR3(1)   <-------                            <---------ANAC46 --------->At4g35610       --------->ATERF1(1)   <-------                         ------>ZmHOX2a(2)<------NtERF2             --------->ATERF1(1)--------->ANAC46          --------->YAB1<------ZmHOX2a(2)<---------RAP2.6(3)       <-----------HVH21<---------ZAT14 -------->DOF2        <xxxxxxxxxxxxxxxxsmallRNA(i)               <------NtERF2  --------->ZAT6   ttaaagctggaataagaaagtttgagatcgccgtggacgaggccgtcatcgcccgagcctcatagtcggagtcgcagccgtcacactacacacagctttt  19710200                                            <------MYB83                                            <------MYB46(1)                                           xxxxxxxxxxxxxxxx>smallRNA(s)                                          --------->ALFIN1                                          <--------P                                          <<<<<<<<<MYB98                                         <---------ANAC58                                         <-------GAMYB                                         <---------ANAC58                                         <---------ANAC46                                        <---------MYB46(3)                                      <---------ANAC46           <------MYB83                                     xxxxxxxxxxxxxxxx>smallRNA(s)<------MYB46(1)    --------->TOE1(3)           <---------AHL20(2)          <-----------RAV1(1)        <----------DOF2    --------->TOE2(3)           --------->AHL20(2)   --------->ATHB12      <---------ANAC55(1)    <xx --DAG2        <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------ANAC46      ---- ---DOF2    <---------ICU4  xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ANAC46    <---------------   tcaaaaccctaaaatttttacaagtctgggcttattaattgtgggttgggcttattgattgtatgttgggttttgttaagtgtattgggcttttattttg  19710300  Previous    Next  AGI:  At1g52905.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27565.1) Range:  from: 19709753    to: 19710374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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