Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>ZmHOX2a(1)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                               --------->TOE1(3) --------->AHL20(1)                                            <-----------GT1      --------->AHL20(2)                                         --------->YAB1          <---------AHL20(2) ------->HVH21                       --------->AHL20(2)       --------->AHL20(2) ----ANAC58                         <---------YAB1       <---------AHL20(2)           ---------->DOF2 ----ANAC55(2)           <------------MYB.PH3(2)         --------->AHL20(2)   ------------>CBF ----ANAC58 <-----------TBP       <---------ICU4     <---------ARR11(3)  --------->TOE2(3) --->ANAC55(2)     <---------ZAT6 <--------HAHB4     --------->ARR11(3)  --------->TOE1(3) ----->GT1<---------AHL20(2)     <---------YAB1--------->YAB1<---------AHL20(2)     ----------->TBP ----O2   --------->AHL20(2)     --------->ICU4--------->TOE2(3) <---------AHL20(1)--------->AHL20(2)   tgacatttacatttatatatagtgttaacaaactcattattatttataaccataagattttaaataatataatatccttaaacaatataaaagtctcatt  19689000                                                 --------->ICU4                                                 <---------AHL20(2)                               ---                                                 <---------YAB1                                   <--                                              <---------ARR11(3)                          --------->AHL20(2)                                              --------->ARR11(3)                          <---------AHL20(2)                                             <------ZmHOX2a(1)                       <---------ARR11(3)                                           <---------TOE1(3)                         --------->ARR11(3)                                           <---------TOE2(3)                        <------ZmHOX2a(1)                                --------->ARR14(2)                                <---------TOE1(3)                                <---------ARR11(3)                                <---------TOE2(3)                                --------->ARR11(3)           <----------DOF2  <----------DOF2 -------                                <---------ARR14(2)  <---------YAB1     --------->AHL20(1) <---------AHL20(1)                        <---------YAB1 <----------DOF2    <-----------GT1   --------->ATHB12 <-------                     <-------TEIL    --------->ATHB12--------->AHL20(2)--------->ARR11(3) --------->AHL20(1)   tacctccaattttgaattttgggttcatgatacagatattgatttaaggatattattatttatctttatcacatatattgatttaaggatattatattat  19689100                                                          --------->ATHB12                                                          --------->ATHB51                                                       <---------ICU4                                                      --------->ICU4                                                      <---------YAB1                                                    --------->YAB1                                                    <---------ICU4                                                   <---------YAB1                                                   --------->ICU4                                                 -------->HAHB4                                                 <--------HAHB4                                                 -------->ATHB1                                                 <---------ICU4                                                 --------->ATHB51                                                 --------->YAB1                                                 <---------AHL20(2)                                                <---------ATHB51                                                <---------YAB1                                                --------->ICU4                   --------->AHL20(1)         <---------ICU4                   <---------ARR11(3)         --------->YAB1  <---------ARR11(3)                         <---------ATHB51  --------->ARR11(3)  <-----------GT1        --------->AHL20(2)                    <---------ANAC58 ------>AHL20(2)   <---------AHL20(1)        <---------AHL20(2)      --------->ARR11(3) -------AHL20(2)   --------->ARR11(3)        --------->ICU4         <---------GLK1(2)               - -->AHL20(2)      <---------AHL20(2)       --------->YAB1<---------YAB1            <---------ANAC58 < --AHL20(2)   --------->ICU4        ----------->RAV1(1)--------->YAB1--------->GLK1(2)  <---------ZAT18   ttaaaatcttatggtcataaatattttcagcatttgcacaacaaaaaataattattattattattgagaagaatcttgtaagagtacttgtggacacagt  19689200                        <---------HSFB2a(1)                                       <---------AHL20(2)                        --------->HSFC1(2)                                       <---------YAB1                        --------->HSFB2a(1)                                   --------->AHL20(1)                        <---------HSFC1(2)                                    <---------AHL20(2)                       --------->ARR14(2)                                     <---------AHL20(1)                       <---------ARR11(3)                                     --------->AHL20(2)                       <---------ARR14(2)               <------ZmHOX2a(2)  <---------GLK1(2)                       --------->ARR11(3)              <-----------HVH21 --------->LBD16                       --------->GLK1(2)      --------->ARR11(3)        <---------HSFB2a(2)    <-----          ------>ZmHOX2a(1)        <-------GAMYB    <---------HSFB2a(2) --------->HSFB2a(2)   <------ -------->ZAT14       <---------GLK1(2)       <---------ARR11(3)    <----------DOF2   --------->YAB1 ---------ZAT18   --------->LBD16 ----------->GT1   --------->HSFB2a(2) --------->HSFC1(1) ----------   agtactctcatcctctaatccgaagaatcttctattcggttaaaacaagaacttctcgatcacaccgaaactttccagaatttattaatcgtagccgttc  19689300                                                                                                -----                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------      <-----------HVH21                                                    --------->TOE1(3)  -------     --------->bZIP60(2)                                                   ------->GAMYB      <------     --------->O2                                                        <---------At5g28300 <-------TEIL     --------->ANAC46                                                   <-----------GT1  --------->ANAC58     <---------O2                                                --------->At5g28300     --------->ANAC46 --TEIL           --------->YAB1             <---------MYB52(1) ----------->GT1          --------->ANAC58 ---MYB52(1)--------->YAB1    --------->MYB52(1)             <---------ALFIN1  --------->At4g35610 ----->AtSPL3--------->ARR11(3)      --------->YAB1         --------->MYB46(3) <---------At4g35610   atcttcgacgtcaaacatattgataagtcaaaaaacgaatcacaaccgttagatttagttcaaacaccgtaatataaccgtagcggaacataagctacgt  19689400                 --------->ANAC58                 --------->ANAC46 ---->ALFIN1     --------->ANAC58                              <---------ARR14(2)                  -- ---ANAC58--------->ANAC46                            --------->ZAT2                            ----- ---O2   <---------LBD16            <-------TEIL      <---------ZAT2                            <---- -->O2 <---------REM1(2)       --------->MYB52(1)    <---------ALFIN1                           ----- ---ANAC46--------->ANAC58     <---------DOF5.7(2)  <---------ALFIN1                           ------ -->ANAC55(2)  *TSS    --------->YAB1              --------->LBD16                         <--------- ---ANAC58--------->ANAC58   --------->ARR11(3)   --------->ANAC46                         <---------   ggtggaatcttcacggctcacacaaatataagataacgtccgtttcaaattcccccaactcggagaaaccgaagcgagtctgactctctgagtcgtcacc  19689500                                                             <---------ANAC58                                                             <---------ANAC58                                                            --------->ZAT2                                                            --------->HSFB2a(1)                                                            --------->At4g35610                                                            --------->HSFC1(2)                                      <---------ALFIN1      <---------At4g35610    <---------WRKY12      --------->ZAT2                    <---------HSFC1(2)    <---------WRKY38(1)   --------->At4g35610              ------->TEIL  <-----------HVH21       <---------At4g35610           --------->ANAC58 ------->DEAR3(1)         <---------ZAT2<---------ALFIN1--------->ANAC46 ---->AtMYB61           <---------RAP2.6(2)----------------------->TaNAC69(2) -----ALFIN1     ------>NtERF2       --------->ZAT14    --------->ANAC58 ---->DEAR3(1)   --------->LBD16   --------->ANAC46     <---------ANAC55(2) --->MYB46(3)   --------->ANAC46   --------->ANAC58     <---------O2 --HVH21       <---------LBD16     --------->ANAC58     --------->O2          --------->ANAC46 --TGA1    <-----------HVH21     <---------ALFIN1     <---------ALFIN1------>ZmHOX2a(1)      --------   accgagtcaactctgtctccgccatggctgctgcttcactccacacttcaatctcaccacgtagcttccttcctctctccaaaccatctctaaaacctca  19689600                                              --------->ZAT18         <---------MYB59               -                                            <---------ZAT18 --------->ANAC58                       --                                    <---------ANAC46    --------->LBD16                            <-                                    <---------ANAC58   <---------ANAC58                            --                                    <---------ANAC58   <---------ANAC58                        <-----                                <---------GLK1(1)      --------->ANAC55(2)                     ------                               --------->ARR14(2)      <---------ANAC55(1)                    ------>ZmHOX2a(2)                               <---------ARR14(2)      <---------ANAC55(2)                    =======                              ===============================HOX2a_HOX2a                    ---------                              <------ZmHOX2a(1)       ------>ZmHOX2a(2)          <-------TEIL<------ZmHOX2a(2)                       --------->MYB52(1)<---------ANAC46   --------->ANAC58    <-----------HVH21 ---                     <---------MYB52(2)  <---------ANAC58----------->TGA1     --------->LBD16======== ->AtMYB61     <---------------------WRI1<---------ANAC58----------->HVH21  <---------LBD16 <--------   ccgttcccaaattctactgagaaacaaacagaggaattgcgtttcgtgcgcattgatccgtgacgaaatcgacctgattccggttcagagccgagatcgg  19689700                         --------->ICU4                    --------->MYB55(2)                    <---------MYB46(3)                   --------->ALFIN1                 <---------ANAC46                <---------DEAR3(1)                --------->MYB52(2)            <------MYB83 <---------ZAT6            <------MYB46(1)            --------->HSFC1(2)               <-------GAMYB ------>MYB83   <---------MYB46(3)          <---------MYB46(3) ------>MYB46(1)--------->MYB55(2)          <---------DEAR3(2)          <------MYB83 -------->ORA47(1) <---------AtMYB61        --------->MYB55(2)          <------MYB46(1)            <- ------->DEAR3(1)<------MYB46(1)           <---------DEAR3(1)         ============================MYC_MYB --------MYB59 <-------TEIL               <------NtERF2             <---------REM1(1)   <---------O2 ------->MYB46(3)<------MYB83            <---------DEAR4(2)       <-------GAMYB  <---------ZAT14 <--- ----SPL7<------ZmHOX2a(1)               <---------RAP2.3(1)      ================================MYC_MYB ----->HVH21<---------HSFB2a(1)         <---------RAP2.3(3)      --------->MYB111(2)    --------->O2 ===============HOX2a_HOX2a             <---------DEAR3(1)       --------->MYB55(2)     --------->TGA1a >ARR14(2)  <---------HSFC1(2) --------->ZAT14                   <---------MYB46(3)     ============= ------>DEAR3(2)--------->MYB46(2)      <---------RAP2.3(2)------->TEIL<---------TOE1(2)<---------TGA1a ===============HOX2a_HOX2a    <---------ZAT14 <---------MYB46(3)--------->MYB52(2)  ----------->HVH21 -ARR14(2)  --------->HSFB2a(1)--------->ZAT18<--------P--------->ICU4<--------P <---------At4g35610   accgaccatgaggaaggttcggtggtagtgatgagcactgagacggcggttgatggtaatgaatcggttgttgtaggttttagtgctgcgacgagtgaag  19689800        <---------MYB52(1)               --------->At4g35610       --------->TOE2(3)                 <---------At4g35610   <----------DOF2                       <---------ZAT2 --------->At4g35610                 <---------HSFB2a(2) <---------ZAT2                      --------->HSFB2a(2) <---------At4g35610            <<<<<<<<<TBF1 --------->ZAT2              <<<<<<<<<TBF1 --------WRKY12  <---------GLK1(1)  <---------LBD16  --------->At4g35610 --------HVH21   --------->GLK1(1) <---------LBD16 <------ZmHOX2a(1)                          ------>ZmHOX2a(2) =============bZIP_DOF    <<<<<<<<<TBF1  --------->ZAT2   ---------->DOF2                 <---------YAB1   gtcagctttcgttagaagggtttccttcttcttcttcttcgggagctgatttaggagatgaaaagagaagagagaacgaagaaatggagaagatgatcga  19689900  Previous    Next  AGI:  At1g52870.1    Description:  peroxisomal membrane protein-related. similar to peroxisomal membrane protein-related [Arabidopsis thaliana] (TAIR:AT4G03410.2); similar to peroxisomal membrane protein-related [Arabidopsis thaliana] (TAIR:AT4G03410.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96261.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) Range:  from: 19689415    to: 19691531    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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