Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR11(3)                               <---------ARR14(2)                   <---------ICU4                   --------->ATHB51           ---------->DOF2                   -------->HAHB4            --------->AHL20(2)                    --------->AHL20(1)                   <--------ATHB1            <---------AHL20(2)                    <---------AHL20(2)                   --------->YAB1       <---------AHL20(2)                         --------->AHL20(2)                   <--------HAHB4--------->YAB1                                    <---------AHL20(1)         <-----------RAV1(1)   --------->ARR14(2)                                 <---------AHL20(2)  <-----------GT1 --------->AHL20(2)    --------->AHL20(2)                        --------->AHL20(2) ----->AHL20(2)   <---------ATHB12  <---------ICU4        <------ZmHOX2a(1)    <---------ICU4 ------- ---->AHL20(1)    <---------ATHB51 <---------YAB1        ----------->GT1      <---------YAB1  ------- -----AHL20(1)    --------->ICU4<------ZmHOX2a(2)       <---------TOE1(3)  ----------->GT1    <------ ->AHL20(2)       <---------YAB1=================================HOX2a_HOX2a  --------->ICU4  <------ ->YAB1<----------DOF2         --------->ARR11(3)       <---------TOE2(3)<---------At4g35610  ------- --AHL20(2)---------->ID1     <------ZmHOX2a(1)<---------TOE2(3)         <-------GAMYB   ----------->GT1   tatataactctttgttgctaataattaagagaggatcatcatttaaattaaagaaattaaggaaaaaaacaagtgagttgataattaaatttggaaaatc  19686800                                                                 <---------ATHB12                                                                 --------->AHL20(2)                                                           ------>ZmHOX2a(2)                                                           ====================HOX2a_HOX2a                                                          --------->GLK1(1)                                                          <---------GLK1(1)                                                          =====================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                               --------->At4g35610      --------->YAB1                         --------->MYB46(3)<---------------AGL15    <---------------------WRI1             --------->MYB52(1)  --------------->AGL15  <---------WRKY12                      --------->ANAC46 <---------ARR14(2) -->ARR11(3)                            --------->ANAC58 <---------ARR14(3) -->GLK1(2)                             --------->ANAC58 <---------AGP1 <------ZmHOX2a(1) ---ARR14(2)                     --------->ARR14(2)      --------->ARR14(2)         <-----------ARR10 ---ARR11(3)                    <---------GLK1(2)        --------->ARR14(3)        <---------GLK1(2) -->ARR14(2)               ----------->RAV1(1) <---------At4g35610<---------AHL20(2)--------->GLK1(2)   tggttcaacgataagacttaagaacagagccacagaaactgcaaacaacagctctccaagatctccaataaataggaatgaaacagaatctagtcgaagt  19686900                                                      <---------MYB52(1)                                                     <---------MYB52(1)                                                    <---------DEAR3(2)                                                  <------NtERF2                                                  --------->ATERF1(1)                                                 <---------ATERF1(1)                                                 ------>NtERF2                                                ------->GAMYB                                                <---------ATERF1(2)               --------->ANAC58                 --------->RAP2.3(3)               --------->ANAC58                 --------->DEAR3(1)        <---------DEAR3(1)                      --------->ATERF1(2)       <------NtERF2                            --------->RAP2.3(2)       <---------------------WRI1              --------->MYB46(3)      <---------RAP2.3(1)                      --------->ATERF1(1)     <---------DEAR4(1)                        --------->ERF1     <---------At1g77200                       --------->DEAR3(2)     <---------DREB2C(2)                       <---------MYB55(2)     <---------RAP2.3(3)                       --------->RAP2.3(1)                       --------->ANAC58     --------->ETT(1)                         <---------ATERF1(1)                      ------->GAMYB     <---------DEAR3(1)                       --------->ZAT2                          --------->MYB46(3)    --------->RAP2.6(3)                       <---------At4g35610        <---------ANAC58--------->ANAC58    --------->DDF1                            <---------ZAT2             <---------ANAC58--------->ANAC46   <-----------HVH21        <---------ALFIN1  --------->At4g35610    <----------DOF2 -------->P     <  <-----------RAV1(1)     <---------ALFIN1   --------->ANAC46     <-----------GT1   --------->WOX13(1)   cttcatgtcggcgatgctcgcacaatggccacaccgtgagcaagttccagccgccggtttgctccgtttcactttccttgtctgatcaaccaagaaacag  19687000                 --------->HSFB2a(2)                 <---------HSFB2a(2)              <---------------AGL15              --------------->AGL15        <---------ARR11(3)        --------->ARR11(3)        <---------ARR11(1)                      --------->YAB1        <-----------ARR10                      <---------ATHB12                          --------->MYB52(2)        --------->ARR14(2)                    ------>MYB46(1)                      <-----------RAV1(2)        <---------ARR14(2)                    ------>MYB83                   --------->CCA1(2)       <---------CCA1(2)                     --------->WOX13(1)       <----------DOF2    <---------MYB46(3)       <---------ARR14(1)                 ------------------------>ANAC81   <---------ARR14(2) ---------MYB52(2)                      <---------ETT(2) ---------->DOF2    --------->ARR14(2)<------   aaacaaaccatatcttcttcaagaagaaaactctgatatatgtagaccaatcagagaagaaaagaaaactctcttttggatacgaccaggtttgttatca  19687100                                                                       --------->HSFC1(1)                     <------------------------ANAC81                   <---------HSFB2a(2)          --------->KAN4(2)                                            --------->HSFB2a(2)         <---------KAN4(1)                                        *TSS<---------LBD16         --------->HSFC1(2)                               --------->ARR11(3)         --------->KAN4(1)              <----------DOF2   --------->ARR14(2)         <---------HSFB2a(1)            --------->TOE2(3) <---------GLK1(2)         <---------HSFC1(2)         <----------DOF2       <---------ARR11(3)           ----------->TBP         --------->HSFB2a(1)     <-----------GT1          <---------ARR14(2)     ---------->ID1 ---YAB1<---------KAN4(2)   <----------DOF2 <---------TOE2(3)<---------AHL20(2)<-----------RAV1(1)   gagaaggaagaatgttctctgtgtcttcttctttttttctttctttaatgtggttttgcagattttatgagttctggaattttgtggctataaataacaa  19687200                                           --------->ALFIN1                                         --------->ALFIN1                    --------->ICU4                                       <---------TGA1a                     --------->AHL20(2)                                       <---------O2                       <---------AHL20(2)                    ---------->DOF2    --------->O2                   --------->AHL20(2)           <------ZmHOX2a(1)    --------->WOX13(1)            <---------AHL20(2)        <-------TEIL       <---------TOE2(1)      <---------ATHB12               <---------AHL20(2)        --------->GLK1(2)       <---------TOE1(1)  --------->AHL20(2)      ----------->GT1   ----------->GT1    --------->CCA1(2)    --------->TOE1(2)<---------TOE2(3) --------->TGA1a       --------->AHL20(2)       --------->ARR11(1) --------->MYB52(1) =============================bZIP_DOF  --------->YAB1 --------->AHL20(2)   aaaaaacggacgaggaatgaattaaagtttaaatcattcactcgtgtggggagagttttaaaaataaatgaagtaaataattttgagagattcgagtctt  19687300                                                                     <---------ICU4                                                          <---------YAB1                                                         <---------ARR11(3)                                                         --------->AHL20(1)                                                         <---------AHL20(1)                       --------->YAB1                    --------->ARR11(3)                     --------->AHL20(2)                <---------ARR11(3)                  <---------AHL20(2)                   --------->ARR11(3)                  --------->AHL20(2)                   <---------AHL20(1)                  --------->AHL20(1)                   --------->AHL20(1) <---------ANAC58             --------->AHL20(2)                     --------->AHL20(2)    <---------ANAC58         ----------->GT1                       ----------->GT1----------->GT1                      --   ggacatatatacagaaaaaataaaataatacttttgacatgaactaaaatgctaaaaaatatttttgtaaattagtacttgcattcttatatagtttgcg  19687400                           ----------->GT1                           <---------ANAC46                         <---------ZAT14          --------->AHL20(2)          <---------AHL20(2)      <-----------GT1        --------->TOE2(3)--------->ZAT14          <---------WOX13(1)      <---------TOE2(3) <---------ANAC46        --------->ATHB12                       <-----------HVH21 --------->ZAT6       <---------ANAC46          <---------MYB46(3)                 --------->ZAT6 ------->YAB1      <-----------RAV1(1)     <---------At5g28300                  ------>ZmHOX2a(1)  <-   ataatactaacattaattgttgtgttgtgtagtatattactcatttacagtgattgcaaaacaaaattcagttttctacttccttacactgttacacact  19687500                     <--------ATHB1                     -------->HAHB4                     <---------ICU4                     --------->ATHB51                    --------->ICU4                                   <------MYB46(1)                    <---------ATHB51                                 <------MYB83                    --------->AHL20(2)                              <---------TOE2(2)                    <---------AHL20(2)                              --------->MYB59                    <---------YAB1            <---------YAB1     <---------ANAC46            --------                   <---------AHL20(1)        --------->AHL20(2)  <---------ANAC55(2)         --------                  --------->YAB1           --------->AHL20(1)   <-------TEIL                 <-------              --------->TOE2(3)           --------->YAB1      <---------SPL7             --------->LBD16             ----------->GT1              --------->AHL20(2)<---------------AtSPL8      <---------ANAC46             <---------ANAC46       ----------->GT1 <----------ID1  <---------TOE1(2)   --------->ANAC55(2)             <---------ANAC55(2)    <---------ANAC55(2) --------->DAG2              --------->ZAT2  < --------YAB1--------->ANAC55(2)    --------->ANAC55(2)---------->DOF2  <-------TEIL<---------ZAT2<--   tatacttacattgtaacgtaaaataattgtagtttgttatgtaataatattatagggaaaaggaggtacgtaggtacaaagtctctagctccgtattaat  19687600                                                                <-------MYC4                                                                <-------MYC2                                                                ------->MYC3                                                                ------->MYC2                                                                <-------PIF5                                                                ------->MYC4                                                                <-------MYC3                                                               <---------ANAC46                              ===========================================bZIP_DOF                              <----------DOF2                  <---------ANAC55(2)                        ---------->DOF2                        --------->O2                        =================================================bZIP_DOF                   --------->RAP2.6(3)                         <---------TGA1a                   <---------At4g35610                         <---------O2                   --------->At4g35610                         --------->TGA1a          ------->TEIL<------NtERF2                           ------------>OsbHLH66 ->ICU4<---------YAB1--------->RAP2.6(2)                --------->At4g35610                        <- ->AHL20(2)      ---------->CDC5                --------->ALFIN1------->PIF5                      <-- --AHL20(2)     ------>ZmHOX2a(1)           =============================bZIP_DOF      <---------ANAC46 -----------GT1--------->TOE1(3)            ---------->DOF2 <---------ARR14(2)         <---------ANAC58 ---------HVH21--------->TOE2(3)       --------->ICU4   <---------At4g35610            <---------ANAC58   tgtcacattatgaatttccttagcggcaaaggctttgtgtcatgaagaaagtgtgagtagcagacacgtggacaaaacagttggatgttgagtatgtcat  19687700  Previous    Next  AGI:  At1g52855.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15534.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39221.1) Range:  from: 19686614    to: 19687166    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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