Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <-------GAMYB                <---------MYB46(3)                --------->MYB55(2)                --------->MYB52(2)                --------->MYB111(1)                --------->MYB111(2)               <--------P             <------MYB46(1)                                                      ----------->GT1             <------MYB83                               --------->ANAC55(2)    <---------ATHB12            --------->MYB59                 --------->REM1(1)             --------->GLK1(2)        <---------AHL20(2)                 <-------TEIL <---------ANAC55(2)  --------->WOX13(1)       <---------YAB1                  <---------------AtSPL8      --------->CCA1(2)      --------->AHL20(2)             <-------TEIL  --------->YAB1 <---------ARR14(2)           <-----   gctcacatttttatttggtagttgaatacaaattgtacatacaggtacatcaagaatcacataatgtagatttgagaatcaatgaagaaaaaaaccctca  19677800                                                                      --------->TOE1(1)                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->O2                                                            <---------ANAC55(2)                                  ----------->GT1           --------->TGA1a                                 ----------->GT1            <---------TGA1a                              <---------ANAC58              <---------O2                              <---------ANAC58          <------ZmHOX2a(1)     --------->ZAT6                       <------ZmHOX2a(1)         --------->ICU4      --------->At4g35610    --------->ATHB12 <---------TOE2(3)      <---------ANAC55(2)    --------->YAB1  <---------TOE2(3)  <---------TOE1(3)      --------->ANAC55(2) --------->WOX13(1)             <----- ----ALFIN1  --------->YAB1   <---------ANAC46   <---------ATHB12 <---------YAB1   <---------TOE2(3)   catcaaggattggaattagaattaaggaagttgagtgggaaataacatgtaatcaataggacacgtctatcatcggactatcactaatgttttttttttt  19677900                                             <---------ARR11(3)                                            --------->CCA1(1)                                        <---------AHL20(2)                                ---------->ID1           <---------DAG2       <-----------GT1--------->TOE2(3)        <-----------GT1        <-----------GT1 --------->YAB1        <---------AHL20(2)  <---------YAB1  --------->RVE1(1)   <---------AHL20(2)      <---------AHL20(2)--------->AHL20(1)                     --------->RAP2.6(3)   --------->AHL20(2)    <---------YAB1 --------->AHL20(2)                         --------->MYB52(1) --------->TOE2(3) ---------->ID1  ------>ZmHOX2a(1)                          --------->AHL20(2) <----------DOF2 <-----------RAV1(1)   <---------AHL20(2)                  --------->HSFB2a(2) ------GT1 <----------DOF2 <---------AHL20(1)--------->ARR11(3)            <---------HSFB2a(2)    <--   cttctttaatttactttatttgtggctattatttttcctattttaaatatcttaatgcttaatatttgttcacatttctaaaaaataacggctggatttt  19678000                                                     >>>>>>>>>>AtMYB44                                                     --------->MYB59                                                     ----------->GT1                                                     --------->MYB111(1)                                                     --------->MYB52(2)                                                   <---------MYB52(1)                                                  ------------>MYB.PH3(2)                                    --------->MYB52(2)  <-----------GT1                          --------->AHL20(2)  <---------MYB59                        <----------DOF2    --------->ZAT18                   <-----------------AG                 ------->TEIL     <---------MYB52(1) --------->MYB46(2)     --------->GLK1(2) -------YAB1   <-------TEIL    <-------TEIL<---------ZAT18          --------->ZAT6   <---------ANAC55(2)   gtgatagaatgaatagatgcatttagctttaaattcgttacttagtgacctaagttagttacaaaatataacacaaataatctgaataggtaagagtaat  19678100                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                                                        --------->ARR14(2)              <---------CCA1(1)                                        <---------AtLEC2<---------ARR14(2)              <---------RVE1(1)          --------->ZAT18       --------->GLK1(2)       --------->GLK1(2)              <---------ARR11(3)          <---------ZAT18    ------------>CBF  --------->YAB1           <---------AHL20(1)    <----------DOF2         <-----------GT1   <------ZmHOX2a(2)    ------------>CBF    --------->ARR11(3)   ctggttctttagtctactactctactctataaacaatcttttgcatcgatcatattcaaatctggattttgcaatataatatacagctagatatttgagg  19678200                           <------MYB46(1)                        <-------GAMYB                              <---------bZIP60(1)                   <---------ANAC58                                --------->bZIP60(1)                   <---------ANAC58                                <---------TGA2(1)                   <---------ANAC55(2)                          ----------->HVH21                   --------->ANAC55(2)                         <-----------HVH21  --------->YAB1                  ------->TEIL                                --------->O2     --------->TOE1(3)              <-------MYC3 <------MYB83                 <------MYB46(1)        --------->TOE2(3)        *TSS  ------->MYC3 <---------MYB46(3)           <------MYB83           --------->YAB1     ---     ----------->GT1   --------->MYB52(2) >>>>>>>>>TBF1--------->MYB59       ------->TEIL--------->MYB59   gaagaaaatgaaaaaacgtgtacgtgagttggttcttgaatgaagaagaacaagaagttggtccatgtgacataatatgaaccataacaattaggcagac  19678300                                                               <-----------GT1                                                            <---------ATHB12 --------->ATHB12                                             <---------ANAC55(2)          --------->YAB1                                             --------->ANAC55(2)         --------->ICU4                                        <---------ZAT6 >>>>>>>>>>>>>>>>>LFY <---------YAB1          -       <-----------GT1          <---------SPL7     <----------DOF2     ------->TEIL        --------->AHL20(2) -------->GT1         ----------->RAV1(1)    <---------ANAC55(1)    --------->AtLEC2 ---------->ID1 <   gcgttaatttcacttcatatcaaacaacattggtcgtcccaagtgttaagtgtctttcaccaatgtttccatgcatttatgatttatgtcccattaattc  19678400                                                                                   <-------TEIL                                                                              <-------MYC2                                                                              <-------MYC3                                                                              ------->MYC2                                                                              ------->MYC3                                             ------->TEIL --------->ATHB12    <-------PIF5                                             --------->ARR14(2)              --------->ANAC46                                             <---------ARR11(1)              --------->TGA1a                            <---------GLK1(2)<---------ARR14(2)              <---------O2                   <---------AHL20(2)       <---------CCA1(2)                --------->O2                  --------->AHL20(2)      --------->ANAC55(2)                --------->ANAC55(2)              <---------TOE2(3)           <---------ANAC55(2)                <---------TGA1a             <---------AHL20(2)           --------->ANAC55(1)  <------MYB46(1)------->PIF5             --------->YAB1 <---------ARR14(2)--------->At4g35610     <----------DOF2             --------->AHL20(2) <----------DOF2        --------->YAB1 =================bZIP_DOF -------------->AGL15       --------->ARR14(2)<---------At4g35610     <---------DAG2                < ---------------AGL15   <---------LBD16   <---------ANAC55(1)  <------MYB83  --------->bZIP60(2)-----   ttctatatagtgtattaatatttaatctcggatactttagtaatacgtatctgccaaaaatcatttggtatacttttccacgtgattcatagagaagaac  19678500                                                --------->YAB1        --------->YAB1                   --------->At4g35610      --------->AHL20(2)               <---------CCA1(2)     --------->YAB1                  <---------ANAC58    --------->AHL20(2)               <---------ANAC58  ------>MYB46(1)                    <---------ANAC46                             <---------YAB1  ------>MYB83                  --------->REM1(1) <---------YAB1    --------->ATHB12     <-----------HVH21 ---------MYB59               ------>ZmHOX2a(1)--------->ICU4    <----------DOF2<---------AHL20(2) ---->MYB46(3)  <-----------HVH21    <---------ANAC55(2)       ------->TEIL     --------->AHL20(2)   gaccaaataaaaataagatgtcaagtatgttcctacatcgcgtagctaaatgatgaaaccgcatgaactttgatttgaatatttatttttgggtcatata  19678600                                                                            --------->ARR11(3)                                  <---------AHL20(1)                       <---------CCA1(2)                     --------->ANAC46                                   --------->ARR11(3)                     --------->ANAC58                                   <---------AHL20(1)      -----                     --------->ANAC55(2)       --------->AHL20(2)  ------->GAMYB                -----                     <---------ANAC55(2)       <---------AHL20(2)------>MYB46(1)              -------                     --------->ANAC58 <---------AHL20(2)         ------>MYB83               <--------             --------->AHL20(2)   <---------AHL20(2)            ----------->RAV1(1)       --------->YAB1            <---------AHL20(2)    --------->AHL20(1)            --------->MYB52(1)       <---------ATHB12            --------->AHL20(2)    --------->AHL20(2)          --------->MYB46(3)         --------->ICU4    <---------YAB1   --------->ANAC55(1)    ------->TEIL --------->YAB1 <---------ARR11(3)<---------ICU4   ctaattctgatcaaataaataacacgcaacttggaataaatttatgtatataaatgtaatcagaaccaacagaatatatatctagttcgaaatcatgaag  19678700  Previous    Next  AGI:  At1g52840.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G13865.1) Range:  from: 19678208    to: 19679779    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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