Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ANAC58                                                         --------->HSFB2a(2)           --------->ANAC46                    --------->GLK1(2)                   <---------ANAC58           --------->AtLEC2                   <---------GLK1(2)                    <---------ANAC46 ----->LBD16                                  --------->ARR14(2)       <---------YAB1 -----ANAC46                         --------->At4g35610   --------->At5g28300     <---------ANAC58 -----ANAC55(2)         --------->TOE2(2)   ----------->ARR10         --------->AHL20(2) --------->MYB46(3) ---->ANAC55(2)       -------->P     <---------At4g35610  ----------->GT1     <-----------RAV1(1) ----LBD16 --------->ANAC58     --------->ANAC58       --------->ARR14(2)    <------------AtMYB77---- -->MYB52(1)    --------->ICU4  --------->ANAC58       <---------ARR14(2)  <-----------GT1     ------   gggaaattagtccatgccattactaacctatgccaagacagccgaagagattctcaagaaccgtgactagattaatataactgttgctcgaaccaaggtc  19676900                                                                ------>ZmHOX2a(1)                  --                                                               --------->TOE2(3)                 <---                                                           <---------ANAC58                      ----                                               <---------CCA1(2)<---------YAB1                   ----                                      --------->O2        --------->HSFB2a(1)                    ----                          --------->AtLEC2 <---------ANAC46<---------ANAC58                      <---                      ------>MYB83    <---------ANAC55(2) --------->HSFC1(2)                     <---                    --------->AtMYB61 --------->ANAC46    <---------HSFC1(2)                     ====                 --------->ANAC58     --------->ANAC55(2) <---------HSFB2a(1)                  <-----     ------>ZmHOX2a(1)------>MYB46(1) <---------O2<---------ANAC58                 ------>ZmHOX2a(1) ----->WOX13(1)  --------->ANAC58 <-----------HVH21<----------DOF2          ========================= --->WRKY18(1)   --------->ANAC46<----------DOF2  <---------ANAC58          <----------DOF2  --------   aatcttcctcatgtatggcacaccatccatgctcactttcacgtagcctatagctttcgatgcttcctcattgttcttctttctcctgtaagaacacaca  19677000        <---------ALFIN1 <------NtERF2 ------->ALFIN1 ------O2 ----->TGA1a ----->O2                    ------->GAMYB                                                     ------ ----->ZAT2                  --------->ATERF1(2)                                               <----- ------TGA1a                 <---------ATERF1(2)                                  <---------MYB52(2) ------ZAT2                 --------->MYB46(3)                                  <---------ARR11(3) ====================================MYC_MYB                                    --------->GLK1(2) ------RAV1(2)             --------->MYB52(1)                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ======bZIP_DOF          --------->MYB46(3)     <---------At4g35610  <---------YAB1 --------->MYB52(1) ->ANAC46       <---------WRKY18(1)    <-------TEIL      --------->DEAR3(2)     <-----------ARR10   <   ggtggccatcccaccgcttgactcttcacaaccggcagtgattcatcttcaactgatgaaacgacgctgttttcattctcagtatctaacgctgatgagg  19677100                                                                      ===============================            --------->ZAT14                                           <---------HSFB2a(2)            --------->ZAT18                                           --------->LBD16            <---------ZAT14                                           ------>ZmHOX2a(1)            <---------ZAT18                                           --------->HSFB2a(2)        --------->LBD16                                              <---------LBD16    --------->ARR14(2)                                              ----------->RAV1(2)    <---------ARR14(2)                                          --------->ARR11(3)   <---------GLK1(1)                                           <---------ICU4   <---------CCA1(2)                    --------->LBD16     <--------HAHB4 --------->YAB1                       ------>ZmHOX2a(2)     --------->YAB1 --->bZIP60(1)          <<<<<<<<<TBF1<------ZmHOX2a(2)     --------->ICU4                        ---- ----bZIP60(1)--------->ZAT18       --------->ARR14(2)     <---------YAB1                      ------ ---------YAB1<---------ZAT18       <---------ARR14(2)   <----------DOF2          <---------ATHB12   tcatcatatccgagagcaccctcttcttcttcttactcgatccgcatactgatatttcgctataattatctcctggaagacccaatcgaagctctgtgat  19677200             ------>MYB83<---------AHL20(2)         <---------ARR11(3)              ---------->ID1         --------->ARR11(3)             <-----------GT1   <---------ZAT6        --------->AHL20(2) ===HOX2a_HOX2a         --------->AHL20(2)         --------->AHL20(2)          <---------DAG2 -->ZmHOX2a(2)  <----------DOF2     <----------DOF2<---------AHL20(2)          <----------DOF2------- --->ARR11(3)------>MYB46(1)<-----------GT1<----------DOF2               <---------YAB1       -------   ctcgagtgctagaccttcctttgccatttatttcttctcttttttctttttgtttaaatttggctatatgaagttttgatactttttttttctctcaagc  19677300                                                                             <---------AHL20(1)                                                                             --------->ARR11(3)                                                                          --------->YAB1                                                                          --------->AHL20(2)                                                                         <---------ATHB51                                                                         <---------ATHB12                                      <-----------TBP                ------------>CBF                                 <-------PIF5                       <------ZmHOX2a(2)                         --------->At4g35610                        --------->CCA1(2)                         <---------ZAT2                            <---------ARR14(2)                         --------->ZAT2                            <---------ARR11(3)                         <---------At4g35610                       --------->ARR14(2)              --------->YAB1     ------->PIF5                      --------->AGP1 -->ANAC58   <---------YAB1 ------>NtERF2   <-----------RAV1(1)    --------->ARR11(3)  <-------MYC3 -->ANAC58  *TSS    <------------CBF <----------DOF2         ----------->RAV1(1)       ------->MYC3   acttctcttgttggaatgatagtattgagctgcctcgtgcttttatatgttgtcaagttgctccaacaagatccaataatatactgacacatggaagaga  19677400                                                                                     <---------O2                                                                                     --------->O2                                                                                <---------DEAR3(2)                                                                                <------MYB46(1)                                                                                <------MYB83                                                                               <---------MYB46(3)                                                                              <---------ORA47(1)           --------->AHL20(2)                                               <---------MYB46(3)           <---------ICU4                                                   <------MYB83           <---------AHL20(2)                                           --------->ALFIN1           --------->ATHB51                                             <-----------RAV1(1)          <---------YAB1                                            <------ZmHOX2a(1)--------->TGA1a          --------->ICU4                                      --------->At4g35610    <---------TGA1a        <--------HAHB4                                        <---------At4g35610<-----------HVH21        <---------ICU4             <----------ID1           <---------WRKY12<------MYB46(1)       <---------YAB1            <------ZmHOX2a(1)          <---------WRKY38(1)<---------DEAR3(1)       --------->ICU4     <---------ANAC46                <-----------HVH21<---------AtMYB61      <--     --------->YAB1     <----------DOF2           ---------->DOF2 <---------TOE2(3)  <---------ANAC55(2)    <-------TEIL   <---------MYB52(1)             =============================================bZIP_DOF   ctaacattcataattatttctgttagctttgtggaggaagacaaggttagaccaaagacaggtcaactgaggatgtgttggtcggtcacatgagagacat  19677500        ------>ZmHOX2a(1)       <---------ANAC58       <---------ANAC58   <------MYB83                                                                    <---------ANAC46   <---------ANAC58                                                           <------MYB83 --------->ARR11(3)   <---------ANAC58                                                           <------MYB46(1)   <------MYB46(1)                --------->ARR14(2)      --------->MYB52(1) --------->MYB59     ----  <---------MYB46(3)              <---------ARR14(2) <---------ARR11(3)    <<<<<<<<<MYB98  <---------ARR11(3)  --------->MYB59                <------ZmHOX2a(1)   <-----------ARR10     <---------MYB52(1)   <---- ---------RAV1(1)         --------->AHL20(2)   <----------ID1    ----------------------->TaNAC69(2)   atgttgggtccttgttcttcatttttgtttatataggatttgttttaagagaacaaatcttaccggtgttaatatttgttaggtttcttataagatttat  19677600                                                 --------->YAB1<---------ARR14(2)                                                <---------ATHB51                                       --------->AHL20(2)      --------->ARR11(3)                                    --------->YAB1             --------->ARR14(2)                                  ------>ZmHOX2a(1) XXXXXXXXXXXXXXXXXXXX>MIR419                         <-------MYC3  <---------AHL20(2)   <---------TOE1(3)                 <---------ICU4  --------->TOE2(3) --------->ANAC55(2)     <---------ZAT6        <----------DOF2  ------->MYC3  --------->YAB1       <---------TOE2(3)<---------YAB1 ----->ATHB12------>ZmHOX2a(1)   --------->TOE1(3) <---------ANAC55(2)    <---------YAB1 -----YAB1  --------->TOE2(3)  <---------YAB1   --------->ICU4<------ZmHOX2a(1)   cattggccatctttcctaaacattacatgtgttatccttaataatatacaattatgtattctaaggatactgtattagtattatttcttagcctattctt  19677700                 <-------GAMYB                --------->MYB55(2)                --------->MYB111(2)                --------->MYB111(1)                --------->MYB52(2)                <---------MYB46(3)               <--------P             <------MYB46(1)                                                      ----------->GT1             <------MYB83                               <---------ANAC55(2)    <---------ATHB12            --------->MYB59                 --------->REM1(1)             --------->GLK1(2)        <---------AHL20(2)                 <-------TEIL --------->ANAC55(2)  --------->WOX13(1)       <---------YAB1                  <---------------AtSPL8      --------->CCA1(2)      --------->AHL20(2)             <-------TEIL  --------->YAB1 <---------ARR14(2)           <-----   gctcacatttttatttggtagttgaatacaaattgtacatacaggtacatcaagaatcacataatgtagatttgagaatcaatgaagaaaaaaaccctca  19677800  Previous    Next  AGI:  At1g52830.1    Description:  IAA6 (indoleacetic acid-induced protein 6); transcription factor. Identical to Auxin-responsive protein IAA6 (IAA6) [Arabidopsis Thaliana] (GB:Q38824;GB:Q8LEM1;GB:Q9C539); similar to IAA19 (indoleacetic acid-induced protein 19), transcription factor [Arabidopsis thaliana] (TAIR:AT3G15540.1); similar to Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3) (GB:P32293); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 19676164    to: 19677312    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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