Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------------->AGL15                                                                       --------->TOE2(3)                                                                      ----------->RAV1(2)                                                                     --------->MYB52(1)                                                                     -------->P                                                                  <---------At4g35610                                                                 --------->ANAC58                                                                 --------->ANAC58                                                               ------>ZmHOX2a(1)      --------->HSFC1(2)                                  --------->At4g35610      <---------HSFC1(2)                                  <---------At4g35610                      -- --------->ANAC46                                         <---------GLK1(1)                      <--- -MYB46(1)      --------->TOE2(3)                         --------->GLK1(1)            --------->DAG2 -MYB83 <-----------GT1                            <----------DOF2--------->At4g35610 ---------->DOF2 -->MYB59     <---------ARR11(3) <-----------RAV1(1)    <------ZmHOX2a(1)          --------->YAB1----   tatcagcaagtttccacatcttaatctactgaaatttgttgcaaaaattctaactttaggagctcctaagctacctgaaacagaatcaaaaagttatcaa  19620800                        <---------WRKY18(1)                       --------->WRKY12                      --------->ANAC46            ------>ZmHOX2a(2)                                --------->ANAC58          <---------ARR11(3)                          --------->YAB1          --------->ARR11(3)                          --------->ATHB12   ------>ZmHOX2a(1) --------->TOE2(3)                <---------ICU4   ===============HOX2a_HOX2a                        <---------YAB1   ================HOX2a_HOX2a                    --------->AHL20(2) ------->ANAC46      --------->TOE1(3)            <---------AHL20(2) ------ALFIN1  <----------DOF2                <---------AHL20(2) ----->ZAT6<------ZmHOX2a(2)               <<<<<<<<<EIN3     --------->ANAC58                    <---   cactcctccatagatcccttttaccttgacctatacatgtttcaatgtataatttatcattgcaagtcatagtcttgaaacaagtagagaaacaatagca  19620900                        --------->ARR11(3)                  --------->ANAC46         --------->ANAC58         --------->ANAC58  <---------------AtSPL8<---------ARR11(3)  --------->DAG2  --------->ANAC58                 --------->YAB1 ---------->DOF2  --------->ANAC58             --------->ZAT6    --------->YAB1 ------YAB1 <----------DOF2             <-------TEIL  --------->YAB1<-----------GT1   ---------------   ttataaagtacaagctttaaacgcattatcttgaaacgaagatgcatcaacactaatcacattgcaaaaataactcttcttgttcaaacccatttgagta  19621000                                   ----------->RAV1(1)                                  <----------ID1       ----------->RAV1(1)               <------ZmHOX2a(1)                            --------->ANAC46   --------->YAB1                  --------->GLK1(1)                       <---------ARR14(2) <---------ATHB12                   <------ZmHOX2a(1) >AGL15                --------->ARR14(2)<---------ARR11(3)   --------->CCA1(2)<---------GLK1(1)<----   tcaacgaagaacagattaaaacaaggattcacgagaacaacaaaatcattcatgaggcaacaagatagagaaacttacaggaattcatggaggaagactg  19621100        <---------AHL20(1)        --------->AHL20(2)        --------->AHL20(1)                                       <---------------------WRI1        <---------ARR11(3)                                      <---------DOF5.7(2)        --------->ARR11(3)                                  <---------ANAC46       --------->CCA1(2)                                --------->At4g35610      <---------ARR11(3)   <---------ANAC55(2)        --------->DAG2    --------->TOE1(2)      --------->ARR11(3)   --------->ANAC55(2)  ----------->GT1--------->ZAT18   <------ZmHOX2a(1)    --------->GLK1(2)      ----------->GT1 <---------ZAT14 <------ZmHOX2a(1) -----ZAT14       --------->ICU4       >>>>>>>>>TBF1 ---------->DOF2 --------->CCA1(2)        -------   gagtaggagatatattagtaatgaagaatatgtgatgcgaagaagaagatgggaaaaaagctgagtgaacgatacgaacgaggaagacgattttgttgat  19621200                                                                                                <----                                                                                               <-----            ----------->HVH21                                                    <---------At4g35610     ----------->HVH21                                <---------ZAT18        --------->ALFIN1  <-----    <---------WOX13(1)                             <---------MYB46(3)   --------->YAB1     <---------GLK1(1)   <-------GAMYB <---------------------WRI1  <-----------HVH21     ------------>CBF       <---------ARR14(2) -->ATHB12  ----------->TGA1            *TSS--------->WOX13(1)<---------------------WRI1  --------->ARR14(2)   ttggcgattgacgagtgacgacgatgaaatcgaatttgatgagagtcagtcagtggttcacttgttcgatacaatcagagtggagcaaactggatttgct  19621300                                    <--------HAHB4                                    --------->ATHB51                                    <---------ICU4         --------->PCF2    ---------->DOF2         <---------ZAT18  --------->ANAC46      ----------->RAV1(1)   <----------DOF2     --------->ZAT18         --------->MYB46(3)                         <---------At4g35610 ------DOF2            <---------ZAT18 <-----------GT1                                  <-----------GT1 ----ANAC58      <---------ANAC58  <---------YAB1     <----------DOF2                 <---------AHL20(2) ----ANAC58      <---------ANAC58  --------->ICU4    <---------GLK1(2)            <---------AHL20(2)   ttgggttttagggcccattacttggtccacaaagcccattattaccacaacaacagcttttcaaagtataaatcgactcattgtttattttaagctctct  19621400                    <---------AHL20(2)                  --------->AHL20(2)                  <---------AHL20(2)                --------->AHL20(2)                <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(2)            --------->AHL20(2)                                                <---------AHL20(2)           <---------AHL20(1)                                             <---------AHL20(2)           --------->AHL20(1)                                             --------->AHL20(2)          --------->AHL20(2)  <---------AHL20(2)                       <---------AHL20(2)      <---------AHL20(2) <-------TEIL                                 --------->AHL20(2)      --------->AHL20(2)<-----------GT1           <---------YAB1 --------->AHL20(2)    <----------DOF2 --------->AHL20(2)       <---------AHL20(2)  <---------AHL20(2)   ----------->GT1   ctatctctttaaatatatatatatatatacatttttttttggtgaatttttttttatagatgtgtatttatattaaatatttattcaatagaaaatatac  19621500                    <-----------GT1                 --------->YAB1                                                          <---------ANAC58                <---------YAB1                                              <---------ICU4           --------->ARR11(3)                              --------->ICU4   --------->YAB1          <---------CCA1(2)                           ----------->GT1      <---------ATHB12         <---------AHL20(2)                          --------->DAG2      --------->YAB1  <---------ANAC58       <---------YAB1                               ---------->DOF2     --------->AHL20(2)      --------->AHL20(2)<---------YAB1       ----------->GT1        ------>ZmHOX2a(2)    <---------ANAC46   acttagaatattatatctataataacatgattctatttcaatcgagtatgtaaaaaaagtaaaaatttgatcgattaatcatgtagtaatctcgtgtttt  19621600                  ---------->DOF2             --------->ATHB12            <---------AHL20(2)           <---------WOX13(1)         <---------ICU4         --------->ATHB12         <--------ATHB1         --------->ATHB51         -------->HAHB4        --------->ICU4        --------->AHL20(2)                                             <---------HSFB2a(2)        <---------ATHB12                                               --------->HSFB2a(2)         --        <---------ATHB51                 --------->YAB1        <---------ARR14(2)                <---        <---------AHL20(2)        --------->YAB1               --------->ARR14(2)          <---------At4g35610    --------->MYB46(3)           <---------YAB1              --------->LBD16               --------->At4g35610  ----------->RAV1(1)----------->GT1  --------->WOX13(1)   <---------LBD16   <-----------GT1  <------   tttccaacaaataattgattaaaagtttaaaacatatcataaatcaaaaccgaatgagtaatccggattgagtctagaattacaagttaagttatctgtc  19621700  Previous    Next  AGI:  At1g52670.1    Description:  biotin/lipoyl attachment domain-containing protein. similar to biotin carboxyl carrier protein of acetyl-CoA carboxylase-related [Arabidopsis thaliana] (TAIR:AT3G15690.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN68457.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Biotin/lipoyl attachment (InterPro:IPR000089) Range:  from: 19618610    to: 19621240    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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