Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ARR11(3)                                                                      --------->ARR14(2)                                             --------->WOX13(1)       <---------ARR11(3)                                 --------->GLK1(1)                   --------->CCA1(1)              <    --------->ANAC58             --------->CCA1(2)                   --------->RVE1(1)              <    --------->ANAC58            <---------ARR11(3)            --------->ANAC46                     == ------>ZmHOX2a(1)              --------->ARR11(3)            --------->AtLEC2         <-----------GT1 ---->ZmHOX2a(2)              <---------TOE2(3)               --------->ANAC58   ==================== ---DOF2            <---------YAB1    -------->P              --------->ANAC58   <------ZmHOX2a(1) <-   atcctccagcaattgggtttttctcattatctaagatatcaacccatctatcaacttcttctccatgcaaaatatcttccacaggaatataacctcttcc  19589800             --------->MYB52(1)          <------NtERF2                                           --------->At5g28300         ------>NtERF2                                           ----------->GT1        --------->ANAC58                                      ----------->RAV1(1)        --------->ANAC58                                ===============================bZIP_DOF    <-----------HVH21                     <-----------GT1 ----------->HVH21   --------->ANAC46              ----------->GT1        --------->O2 ---------WRKY38(1)             --------->ZAT6          <---------O2  --------->ICU4 ---------WRKY12            ------>ZmHOX2a(1)           --------->bZIP60(2) ==================================HOX2a_HOX2a          --------->TGA1a     ---------->DOF2<--------- =====HOX2a_HOX2a          --------->TOE2(3)            ===============================bZIP_DOF   <-- -----ZmHOX2a(2)           --------->TOE1(3)            <---------TGA1a  <---------YAB1--------->MYB46(3)   gatcaacgtcgcgccaatcggattagcatccttaacagtgaaaataacatgtttagccatgtgaccacagtaaatatgaaaagactcaaaccactttggg  19589900                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                 --------->DAG2                                                                ---------->DOF2                                                             <---------ANAC58                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)                      ====================================HOX2a_HOX2a         --------------------->WRI1               --------->ARR11(3)   ----------->ARR10    ---------->ID1    ------>ZmHOX2a(1)  <----------DOF2     <---------ANAC46                <------- -DOF2   <----------DOF2                <---------ANAC58     <---------ANAC58           <---------ALFIN1 --------DOF2     <-----------GT1       <---------ANAC58     <---------ZAT6     <----------DOF2   ttttttggctcctttgttattttcctcgttcttccaactcttgctttctcaagatcgattgtagcgtaaagctgagtttctcctttgccaacaccgattg  19590000                             --------->AHL20(2)                          ----------->GT1                         --------->ICU4                    --------->HSFB2a(2)                    <---------HSFB2a(2)                   <---------LBD16                                           ------->TEIL                 <---------ARR14(2)                                         <---------CCA1(2)                 --------->ARR11(3)                                 <-----------RAV1(1)                 --------->ARR14(2)         ---------->DOF2      <----------DOF2 --MYB52(1)      --------->GLK1(2)       --------->TOE2(3)      <---------DAG2               <-------   tttcttctacatttgctagtatctggaaagattaaaaacagaacattaaagacagattgaaggaaaccttttgttgttgtatctctaaacaacttataaa  19590100                                        ------>ZmHOX2a(2)                                        ===============HOX2a_HOX2a                                      --------->AGP1                                      <---------ARR11(3)                                  <---------HSFB2a(1)                                      <-----------ARR10                            <---------ANAC58                                  ----------->RAV1(2)                              <---------ANAC58                           ------>ZmHOX2a(1)                                       <---------ANAC46                           ====================HOX2a_HOX2a                       <---------ANAC46                        <------ZmHOX2a(2)                                   <---------GLK1(2)                        ===============================HOX2a_HOX2a        <---------TOE1(2)                       --------->ARR14(2) ------->TEIL     <---------At4g35610 <-----------HVH21 ----     <----------ID1    <---------ARR14(2) -------->P <---------AtLEC2     <---------TOE2(2)      ---- --YAB1   ---------->DOF2 --------->TOE1(2)     ------>ZmHOX2a(1)      <---------ANAC46   --------->HSFB2a(1)   tgagagagagacaaaagacaataccgatcctaagaaacctgatctacctccttcagcatggagatgatcaacttcgtagattgtcgcgtgcaatcttcca  19590200                                                                                   --------->TOE2(3)                                                                                  --------->ANAC55(2)                                                                                  ----------->GT1                                                                                  --------->ANAC58                                                                                  --------->ANAC55(1)                                                                                  --------->ANAC58                                                                                  <---------ANAC55(2)                                                                                 <-------TEIL                                       --------->YAB1                      <---------MYB59<----------                             ----------->RAV1(2)   ----------->GT1         --------------->AGL15  <------------MYB.PH3(2)   ------>NtERF2       --------->YAB1             <---------------AGL15  --------->MYB46(3)        --------->LBD16 <---------------AGL15         <-----------------AGL1  <---------MYB52(2)       --------->ANAC46 ===============================================MADS_MADS ----->ANAC46             <---------LBD16  ------------>CBF               ----------------->AGL1 <--- ----->AtLEC2       <-----------GT1   <---------YAB1             --------->TOE2(3)--------->ANAC46   tgtaacaaacactcttccattttttcttcccgcctgtaacatcataacaatattagtaaaactcatacattagattaccaaaatacgtaaattcacattt  19590300                <---------ARR11(3)           ------------>CBF    ------>ZmHOX2a(2)   --------->GLK1(2)                                                       ---------->DOF2   <------ZmHOX2a(2)                                            --------->GLK1(2)                   <  --------->ARR14(2)                                            --------->ARR14(2)               <---  <---------ARR11(3)                                            <---------ARR11(1)           <-------  <---------GLK1(2)                                <---------AtLEC2    --------->ANAC58     ---------  --------->ARR11(3)  <---------ANAC46      <---------AHL20(2)  <---------ARR14(2)     --------->TOE2(3)  --------->AGP1<---------AHL20(1)     --------->AHL20(2)       ------->TEIL           --------->TOE1(3)  <---------ARR14(2) ---------->ID1  ----------->GT1       --------->CCA1(2)         <---------At5g28300 -GT1 ------>ZmHOX2a(1)         ----------->GT1   --------->ZAT14      --------->ANAC58------->GAMYB< --------GT1    --------->AHL20(1) ---------->DOF2<---------ZAT14      --------->ANAC46--------->ANAC46   tacagatcctgtaaacaatatttttcgtttaaaaatgtaaagtaaatttatgtgcagggagagacgaatctacaagctaaagtcattaaccgtaatcagt  19590400                                       ------>ZmHOX2a(2)                                      --------->GLK1(1)                                     --------->ARR11(3)    <------ZmHOX2a(1)                <---------ARR11(3) --------->LBD16                --------->MYB52(1) ---------TOE2(1)            --------->ANAC46                                        --------->YAB1 --------HVH21               --------->ANAC58                                      --------->ANAC58 --ICU4                      --------->ANAC58--------->YAB1                        --------->ANAC58 >ICU4                       --------->ANAC55(2)                               --------->ANAC58 ---------TOE1(1)            <---------ANAC55(2)                               --------->ANAC58   gtccgaggaaacagaagaaactctaaatctcaagtaactgatctccatcaaaacaaaatcgaatcacagaaacagtttgagaggcaagcaaaacactgag  19590500              --------->YAB1                                                       <---------ANAC58             <---------ATHB12                                                      <---------ANAC58           --------->WOX13(1)      --------->DOF5.7(2)                        ------>MYB83         ------------>CBF         --------->TOE2(3)                           ------>MYB46(1)         --------->ZAT14          --------->TOE1(3)                          <---------ALFIN1   <---------ANAC55(2)            <----------DOF2                           --------->MYB46(3)   --------->ANAC55(2)    ----------->GT1       --------->ICU4             --------->ANAC46 --------->AHL20(2)     ------->TEIL     ---------->DOF2  --------->YAB1   --------->ANAC58         < <-----------GT1   --------->MYB52(1)  --------->MYB46(3)<-------TEIL      --------->ANAC58    ------   aaattacatactgcaatcatataacgaatgtttaaactttaaccaaagtatttatgagtttcataaacattttatacacccacttgcttcacaacaagaa  19590600                                                         --------->ZAT14                                                         --------->At4g35610                                                       ------>ZmHOX2a(2)                                                       ====================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                      --------->CCA1(2)                                                      =====================HOX2a_HOX2a                                                     --------->ARR11(3)                                                     --------->ARR14(3)                                                     <---------ARR14(3)                                                     --------->ARR14(2)                              --------->CCA1(2)      <---------AGP1                             <---------ARR11(3)      <---------ARR14(2)                      ------>ZmHOX2a(2)              --------->AGP1                          --------                     --------->GLK1(1)               <---------ARR11(3)                   -------->P                <---------ANAC55(2)                 --------->RVE1(1)              --------->ANAC58                --------->ANAC55(2)              ---------->DOF2                   --------->ANAC46             <---------ARR14(2)              <----------ID1                        --------->ANAC58 --------->ANAC46   --------->ARR11(3)      ----------->GT1       ------------------------>ANAC81 ---------HSFB2a(2) <---------ARR11(3)    ---------->DOF2<---------ZAT14   ----------->GT1--------->MYB52(1) --->YAB1    --------->ARR14(2)  <---------TOE2(3) ----------->ARR10<------ZmHOX2a(1)  --------->HSFC1(2)   taccagaaaccagacgatatgtgatctccaagataaacgttttaaaaaggaaaaagatctgcagagaagaggaagaagagagaaaacgaaactacctgca  19590700  Previous    Next  AGI:  At1g52570.1    Description:  PLDALPHA2 (PHOSPHLIPASE D ALPHA 2); phospholipase D. Identical to Phospholipase D alpha 2 (PLDALPHA2) [Arabidopsis Thaliana] (GB:Q9SSQ9); similar to PLDALPHA3 (PHOSPHLIPASE D ALPHA 3), phospholipase D [Arabidopsis thaliana] (TAIR:AT5G25370.1); similar to PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1), phospholipase D [Arabidopsis thaliana] (TAIR:AT3G15730.1); similar to PLDBETA1 (PHOSPHOLIPASE D BETA 1), phospholipase D [Arabidopsis thaliana] (TAIR:AT2G42010.1); similar to Phospholipase D alpha 1 precursor (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (GB:O82549); similar to phospholipase D [Ricinus communis] (GB:A Range:  from: 19587609    to: 19590220    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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