Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                =====      <----------DOF2                                                                           <----  <---------CCA1(2)                                                                             =====  ---------->ID1                                                                                ===== ---------ANAC58                                                                             <------NtERF2 ---------ANAC58                        <---------YAB1                                    <---------LBD16 -----DAG2                         <<<<<<<<<TBF1                                   <---------YAB1 <-- >DOF5.7(2)                <-----------GT1 <---------YAB1    <----------DOF2  --------->YAB1--------- -MYB52(1)  <---------GLK1(2) <----------DOF2     ------>ZmHOX2a(1)------>ZmHOX2a(1) --------->TOE2(3)   tttcgtctctttcacattctctgcaaatttcactttcttcttcttattcttcctctgtttcttcttttcctctgcatcaaaaattattcttagccggagg  19584000                            ----------->RAV1(2)                                              --------                       <---------------AtSPL8                                            --------->LBD16                      --------->DAG2                                                    >>>>>>>>>>E2Fa                ------>ZmHOX2a(2)                                                       <---------ANAC58              --------->ARR14(2)                                              --------->LBD16<-------              <---------ARR11(3)                                             --------->HSFB2a(2)  ------>ZmHOX2a(2)  --------->DAG2                    <---------MYB46(3)    <---------HSFB2a(2)    - ------->ATHB12<------ZmHOX2a(2)                    <---------ARR14(2)       --------->HSFC1(1)     - =====================HOX2a_HOX2a           --------->MYB52(1)------>ZmHOX2a(2)         <---------ANAC46 --ZmHOX2a(1) --------->ARR11(3)          --------->ANAC58   <---------At4g35610        <---------ANAC58 ========HOX2a_HOX2a---------->DOF2       --------->ANAC58  <---------AGP1   <---------HSFC1(1)     - ======================HOX2a_HOX2a   <----------ID1 --------->ARR14(2)   --------->GLK1(1)<------NtERF2 -------YAB1  <---------ARR14(2)   ---------->DOF2 ==================HOX2a_HOX2a       <---------LBD16 >LBD16   ---------->DOF2   --------->At4g35610    <------ZmHOX2a(1)     <---------GLK1(1)<<<<<<<<<<E2Fb   atgatcggagaagaaagatcggaaaagggtacctgaagaaagacaagaacggaggatttgttgatctgatgtctgatttccagaaaattggcgggaaatc  19584100                                              --------->ANAC46                                              --------->bZIP60(1)                                              --------->ANAC58                                              <---------bZIP60(1)                                           --------->ANAC46                                        <------ZmHOX2a(2)                                     <---------ANAC58                                     <---------ANAC58                                 --------->ATERF1(1)                                 <-------GAMYB--------->ANAC58                                <---------DEAR3(2)                                --------->MYB55(2)                                <---------MYB46(3)         <---------ZAT14       <---------ANAC58         --------->ZAT14       <---------DREB2C(2) ->GLK1(1)     <---------ANAC58<---------RAP2.6(2) --GLK1(1)     <---------ANAC58<---------ANAC58                        --------->ANAC46 -------->ANAC58               <---------ANAC46------>NtERF2           --------->ANAC58           <-- -------->ANAC58               <---------DEAR3(1)                      --------->ANAC58   --------->CCA1(2) -------->ANAC46             ------------>AtMYB77          --------->At4g35610 <---------ZAT6    ----   gcaagaaacagagcagtgcttgagaaaaccatggcggttgcgatcacgacgccatgagaacagcttagtatacaagtcatagtgtttgaaagataaaaga  19584200                                                                                                <----                                          ------->TEIL                                          <----                                       <---------YAB1                                          ------                                     --------->YAB1                                            ------                                <---------YAB1                          <-------MYC2      --------->ARR11(3)       ---------->DOF2        <---------At4g35610                       <-------MYC3      <---------GLK1(2) <---------At4g35610      --------->GLK1(2)                 ---------->DOF2   <-----------RAV1(1) -----TEIL           ---------->DOF2--------->ICU4    ----------->GT1   ------->MYC3      <---------ARR11(3) ----->CCA1(2) ---------->DOF2--------->At4g35610   <-------GAMYB       ------->MYC2     <---------RVE1(1)   ttcagaagagaaagagagaaagagaaagtttctgatgaatgatgaatatgtgtgtgttgaaaaaaagagaagcatgtgttatgttgcagagagatttttc  19584300                                             ------>ZmHOX2a(2)                                            <---------GLK1(1)                                            --------->GLK1(1)                --------->ZAT18             <------ZmHOX2a(2)                <---------ZAT14            --------->ARR11(3)                                 ------- <---------------AtSPL3                    <---------ARR11(3)                        <---------AHL20(2) -----ANAC58    --------->ZAT14           <---------GLK1(1)                          --------->AHL20(2) -----ANAC58  <---------------AtSPL8      --------->GLK1(1)                         <---------AHL20(2) --------->AtSPL3                   --------->At5g28300   --------->YAB1         <---------AHL20(2) --------->AtSPL8   <---------ZAT6  <-----------HVH21  *TSS                     <---------AHL20(2)   gtacttgtaccacaagagagtactgtttgaagttgaacggtgagagatctctcttgtcaataagaatttaagaagaaagttttttatttatttgagaaat  19584400                                                                          <-------GAMYB                                                                         <-----------RAV1(1)                                                                     --------->ZAT14                                                                     <---------ZAT14                                                                   --------->ZAT14                                           --------->DAG2        --------------->AtSPL8                                          ---------->DOF2       <---------At4g35610                <-                                    --------->YAB1              --------->At4g35610                <-                                    <--------ATHB1            <---------ZAT14                     <--                                   <---------ATHB51           --------->ZAT18          ---------->DOF2                                   <---------YAB1            <---------ANAC58      ----------->GT1<--                                <---------------AGL15        <---------ANAC58     --------->DAG2 <--- -->CCA1(2)                    ------------>CBF            <---------ANAC46      ---------->DOF2<----   gagtttgtgagaaattagcaaaaaatgttttctgacaataatagaaaagttggaagttattttgtgtgctgtactctgttggaaaaagttaaagagggag  19584500   ----------->GT1 <---------ANAC58 <---------ANAC46 <---------ANAC58 -----MYB46(1)        <------MYB83 -----MYB83           <------MYB46(1) -------MYB46(3)  <---------MYB46(3)                                                   <---------ICU4 -------AtMYB61<------MYB83  <-----------HVH21             ----------->GT1           ------->TEIL -----P        <------MYB46(1)                             <----------ID1   --------->YAB1       <--- ---GAMYB  --------->ATHB12 --------->ANAC46              ----------->GT1<----------DOF2  <---------WRKY18(1)   ttggtgtgtaaaaagattggtgtttggtttaagtcacaggctcaaaaatcaagtggaaattgggaaaaaaaacttctttcatagttgaatcttgactgtc  19584600                                                                           <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                   <-----------GT1                                      --------->AHL20(2) --------->MYB46(3)      ----------->HVH21    <-------TEIL       <---------YAB1      ----------->GT1 <----------DOF2<--- -------DOF2    --------->YAB1           <---------MYB46(3)   ---------->DOF2  <-----------GT1 ------   tttagtctctgaccatatttataactagattcagtgtctagagttgttatgaataagagtaagataaagagaaatattttataacttttgtcaacaaata  19584700                    <---------AHL20(2)                   <---------AHL20(2)                   --------->AHL20(2)                --------->ATHB51                                    --------->ATHB12                <---------ICU4                                     <---------YAB1                <--------HAHB4                            <---------AHL20(2)               <---------YAB1                             <---------YAB1               --------->ICU4              --------->ZAT6 --------->AHL20(2) ------YAB1  --------->YAB1      --------->TOE2(3)    --------->AHL20(2)   <---------ICU4        ---- --->YAB1 --------->ANAC46       --------->TOE1(3)  --------->TOE2(3) <---------WOX13(1)      <------   tgatcaaatttcccaccataattaaatatgaaataccttagaatagcactaaaacattatataattgttttcattgatcaatacatttaagtagtagaga  19584800                                                                     <---------HSFB2a(2)                                                           <---------YAB1                                                         --------->AHL20(2)                                                         <---------ICU4                                                         <---------AHL20(2)                                                     <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                 <-------TEIL                                                <---------AHL20(2)   --------->HSFB2a(2)            -                                   --------->AHL20(2)--------->AHL20(2)       <-----------GT1      <<                       ----------->GT1       ----------->GT1  <-----------GT1--------->AHL20(2)    <<                   <---------AHL20(2)     --------->YAB1 --------->ATHB51--------->AHL20(2)        <- ----->CCA1(2)     --------->AHL20(2)    <---------YAB1 --------->ICU4   <---------AHL20(2)        <- ---ZAT6    <-----------GT1       --------->AHL20(2)<---------AHL20(1)   <---------AHL20(1)      ----   taagagtagaaattttaccaaaaaattgtttaaaaaataaaaaatcatagttaatttaattatttttccttccaaaaaatttactaagcttcatgttgac  19584900  Previous    Next  AGI:  At1g52565.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62742.1); similar to unknown [Populus trichocarpa] (GB:ABK95602.1) Range:  from: 19583555    to: 19584355    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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