Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC58   ---------->DOF2 <------ZmHOX2a(2)                                                    <---------ATHB12 -----------ARR10                                               --------->ANAC58     --------->ICU4 --->MYB52(1)                                 ----------->GT1   --------->ANAC58     <---------YAB1 >GT1--------->ANAC58          <<<<<<<<<<<<<<<<<LFY        ---------->DOF2  ----------->GT1   cggatcaaagcaagaacaaatttctgaagaacaaaacaatggagaaactagataaaacccataaaccagcaaatcaagttgaaaatcaagattaaaactc  19575500                                                                                               <-----                          --------->At4g35610                                                  <-----                         ----------->RAV1(1)                                                   ------                 ------>ZmHOX2a(1)                                                --------->RVE1(1)                 <----------DOF2                                                 --------->ARR11(3)             <---------ARR14(2)                                                  <---------ARR11(3)             --------->ARR14(2)                                                  --------->GLK1(2)         <------ZmHOX2a(2)<---------At4g35610                                   --------->CCA1(1)         ===============HOX2a_HOX2a                      --------->MYB46(3)   --------->AHL20(2)    <    --------->MYB52(1)  --------->ANAC46        ------->TEIL    --------->LBD16 --------->RVE1(1)  --   catacataccgatcaaatccttttccacagcagaaacaactaaaaatttgcatctttgaacaaacccagaaacaaaacaaaaaaatctctcaaattcagc  19575600            --------->ANAC58            --------->ANAC46            --------->ANAC58                      <----------DOF2                         <---------HSFC1(2)          <---------ALFIN1                        <---------DAG2                          --------->HSFB2a(1)         <---------REM1(2)                       <---------DAG2                       --------->ANAC58     --------->ZAT6                           --------->ANAC58                        --------->ANAC46 <---------MYB52(1)                           --------->ANAC58                 --------->ANAC58 ----ZAT2--------->ZAT14                    --------->MYB52(1)                 --------->ANAC58 ----At4g35610                              <---------DOF5.7(2)            --------->ANAC58 --->At4g35610                          <---------TOE2(3)--------->LBD16 ---------->DOF2  --------->HSFC1(2) ----------DOF2    ------>ZmHOX2a(1)    <---------TOE1(3)------>ZmHOX2a(1) --------->ANAC58    <----- --------------------->TaNAC69(2)     ---------->DOF2  <---------LBD16------->GAMYB   --------->ANAC58   tcctttagctctacacgcttcctcgttgatgcagagagagtaaaggtaacgcctttttcctgaagaatgtaacagcaaagcaagaaaaacgaaactcctt  19575700                                                                            <-----------GT1                                                              --------->KAN4(2)                   <--                                                             <---------KAN4(1)                <------                                <---------HSFB2a(2)          --------->HSFB2a(1)             <-------                                --------->HSFB2a(2)          --------->KAN4(1)              ---------                       <---------DAG2                        <---------HSFB2a(1)  <---------DAG2  <-- -----DOF2             <----------DOF2   ----------->GT1    <---------KAN4(2)     <----------DOF2 <--   tgatgcttaatgagagagagagtcgcttttacttctgtaagaagagaaacaaattttcttagaatattcttcaatgcttaacccctttttgaatgtggtt  19575800                                                                      <---------ARR14(2)                                                            <--------ATHB1                                                            --------->ATHB12                                <-----------GT1            --------->ICU4                          --------->AHL20(1)   <---------------AGL15  --------->ARR14(2) -------ANAC46            --------->AHL20(2)   --------------->AGL15 <---------GLK1(1) -GAMYB                   <---------AHL20(2)  <-----------------AGL3 <---------CCA1(2)          <---- --MYB46(3)              --------->AHL20(2)   ======================================================= >ALFIN1<---------At4g35610   --------->AHL20(2) <---------YAB1      --------->GLK1(1)          <---- -------ANAC58      ----------->GT1  <---------DAG2        <---------YAB1*TSS                   ----- -------ANAC58 <---------AHL20(2)    <----------DOF2    ------------>ATHB5 <---------ALFIN1   <------   gtgtgtgtttagctgttttaatttgaaaaaaattatacactttattaaactattagtgggaatgattgtgcatatccacacatagtcacatatagtattt  19575900       --------->ATHB51       <--------ATHB1                                                     ----------->HVH21       --------->AHL20(2)                                               --------->ANAC55(2)       <---------ICU4                                                   --------->O2       <---------AHL20(2)                                  <---------ANAC58      --------->ICU4                                       <---------ANAC46           ---------->DOF2      <---------ATHB51                                     <---------ANAC58          --------->YAB1    --------->YAB1                                    <---------AtLEC2  =========================bZIP_DOF ----------->GT1       <------------CBF           <----------DOF2       <---------ANAC55(2) -----AHL20(2)       --------->ARR11(3)           ================================bZIP_DOF      <---- ============================MADS_MADS       <---------GLK1(1)          <---------O2<---------ATHB12 -------TBP        --------->DAG2            --------->GLK1(1)          --------->TGA1a        ------ ---->AHL20(2)   ---------->DOF2            <---------ARR11(3)<-------GAMYB     <---------MYB52(2)<-- -----TBP    --------------->AGL15          --------->ARR11(3)====================MYC_MYB     <------   atatagtaataatttcatcaaaaggtattgttttttgaatttcaaagatttccttttcatggcctgttgatgacacatgacaactaatcaaagtttccta  19576000        <---------ALFIN1       ----------->HVH21      --------->AtMYB61                                                                             -     --------->ANAC46             --------->GLK1(2)                                                --     --------->bZIP60(2)          --------->ARR14(3)                                               <-     --------->ANAC58             <---------ARR11(3)                                              ---     --------->ANAC58             <---------ARR14(3)                                              <--   <---------ALFIN1      ------->TEIL                                                             <--   --------->ANAC46  --------------->AtSPL8                                                       <-- -----ICU4         <---------ARR14(2)                                                             --- >ZmHOX2a(1)       --------->ARR14(2)         --------->AHL20(2)                      <---------ANAC46 -------ATHB12     --------->GLK1(2)       --------->ICU4                       <---------AHL20(2)--- ---MYB59          ------->TEIL   --------->ARR11(3)      ---------->DOF2       <---------YAB1    <--   atcacacacctcaccttggtgaatctgtacttacaaaatcttgcaatttttaatacatacaaaagttcaaatactagttttttttattgtgtatgaagaa  19576100          ----------->GT1       --------->CCA1(2)      --------->ARR11(3)      --------->ARR11(1)      <---------ARR11(3)      <---------ARR14(2)      --------->ARR14(2)   <---------------AGL15   --------------->AGL15  <-----------------AG  <-----------------AGL3  ======================================MADS_MADS  ----------------->AGL2  <-----------------AGL1 ----->ZmHOX2a(2)             --------->YAB1 ------->GLK1(1)           --------->YAB1 -----ZmHOX2a(2)        <---------------AGL15                  --------->YAB1 ------>ARR14(2)        --------------->AGL15     --------->YAB1 -------AGP1     --------->AHL20(2)           <---------AHL20(2)                                  <-- -------ARR14(2) <---------AHL20(2)           --------->AHL20(2)                               <----- -------ARR11(3)--------->AHL20(1)        --------->AHL20(2)   --------->TOE2(3)   <---------AHL20(2) ------>ARR11(3)--------->AHL20(2)       <---------AHL20(2)  --------->ARR11(3)    --------->AHL20(2) ------>ARR14(3)<---------AHL20(1)       --------->AHL20(2)  <---------ARR11(3)----------->GT1 ------ -------ARR14(3)<---------AHL20(2)     --------->YAB1     --------->AHL20(2) <---------GLK1(2) <-----   gatctctagatatggaaatttatttgctataatcagaacaaatataaattaaacatagcataaaatcttaatttagatagattgttaaattactcagtgt  19576200                                                                                          -----------                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                       <---------ZAT2                                                                                  --------->YAB1                                                              ----------------->AGL1   --------->ZAT2 ---------HVH21            --------->AHL20(2)                 ----------------->AG<---------ICU4 ----ZAT14              --------->YAB1                   <----------DOF2         --------->ICU4 --->ZAT14             <---------YAB1                 ------>MYB83               <---------ATHB12 --- ----ZAT18    --------->MYB59                         ------>MYB46(1)        <---------MYB52(2)  <---   ggtcagaacaaaatgttaggctcttatcataaatttctgtttctaaacttactaccagcctttaaccaaaacaggtccaactaatcatgagctggttaat  19576300                                                                                                  <--                                                                                                  ---                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                   <---------MYB55(2)         -------                                                                   --------->MYB46(3)       ---------                                                                  -------->P               --------->AHL20(2)                                  ----------->GT1  <---------CCA1(2)              <---------AHL20(2)                          <---------MYB59      <-----------GT1    >>>>>>>>>>>>>>>>>LFY --------->AHL20(2) >GT1                     --------->TOE2(3)<----------DOF2      --------->MYB46(3)--------->AHL20(2) ------>ATHB12    <---------TOE2(3)     <-----------GT1 <---------YAB1      --------->AHL20(2)<------ ------AHL20(2)   <---------TOE1(3) <---------MYB52(1)--------->YAB1<---------ALFIN1--------->WOX13(1)   tcattgtcccagtattgaataaggtttacctaaatccagttatttcttttttcatatcatgaataaacaaccactgttttaaatataaatcaaataataa  19576400  Previous    Next  AGI:  At1g52540.1    Description:  protein kinase, putative. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G15890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62712.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 19573727    to: 19575873    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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