Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->YAB1                 -----                                                           --------->ANAC58                     <----                                                    <---------LBD16                             -----                                                  <---------ARR14(2)                   --------->KAN4(2)                                      --------->ANAC58     --------->ANAC58           <---------KAN4(1)                                      --------->ANAC46   ---------->DOF2        <----------DOF2 <----        <----------DOF2               --------->ANAC58--------->LBD16        ------->TEIL --------->TOE2(3) ------>HVH21                --------->YAB1    <---------GLK1(2) --------->TOE2(3)   <---------YAB1   gactccaaaacttttggtttagagacttgtttcatagtagaagcaactagagtctccggagaagcaatcttagactctgcatctttgattattctcaata  19539200                                                     <---------HSFB2a(2)                                                     --------->LBD16                                                     ------>ZmHOX2a(1)                                                 --------->ARR11(3)                                                <---------GLK1(1)                                                --------->GLK1(1)                                            --------->LBD16                                           <---------ANAC46                                           <---------ANAC55(2)                                           <---------ANAC58                                           <---------ANAC58                                           <---------ANAC55(1)                                           --------->ANAC55(2)                                          ------>ZmHOX2a(2)                                          ==================HOX2a_HOX2a                                        <---------ARR11(3)                                  <--------                                        --------->ARR14(2)           --------->DAG2       ------>MYB83                                        <---------ARR14(2)   --------->MYB52(1)           ------>MYB46(1)            --------->ATHB12            --------->GLK1(2) --------->ANAC58              --------->MYB46(3)           <---------YAB1              <------ZmHOX2a(1)---------->DOF2                 <---------MYB46(2) ---->ARR14(2)                   --------->MYB46(3) <---------LBD16 ---------->DOF2    --------->ANAC46 -----ARR11(3)         --------->ARR14(2)<------ZmHOX2a(2)--------->ANAC58        <----------DOF2 ---->ARR11(3)         <---------ARR14(2)===================HOX2a_HOX2a          <---------ANAC58 -----ARR14(2)      --------->YAB1----------->RAV1(1)--------->HSFB2a(2)         <---------ANAC58   tctgcttctgtttttcattgaatcgtatttgccgaacaacaggatccgtgatatcctggaaagtaacagataaagctagttttgctttcaccaaacactt  19539300                    <---------ZAT2               --------->CCA1(2)                                                                    -               <------ZmHOX2a(2)                                                                    -              <---------ARR11(3)                                                          -----------              --------->ARR11(3)                            <---------YAB1         <-----------GT1  -              <---------ARR14(2)             --------->ARR14(2)                --------->LBD16    <--              --------->AGP1                 <---------ARR14(2)               <---------ANAC46    <--              --------->ARR14(2)     ----------->HVH21    ----------->GT1<---------At4g35610      <-- -ALFIN1  ---------->DOF2      ----------->RAV1(1) <---------------AGL15 --------->At4g35610---------   cttgtagtacatcaaagatccaagcttgttggccaacatgtgaagcgaatttgcacaaaatggtgataacctctcatcttccgagtaacatcccacagaa  19539400 ----->MYB83 -------->MYB52(1)                                                                      <---------ANAC58 >RAV1(1)                                                       --------------------->WRI1     <----- ----->MYB46(1)                                              <---------WRKY18(1)        <---------ANAC58 -------MYB46(2)                                            ----------->HVH21    --------->ANAC58 -------MYB59--------->GLK1(1)                            --------->ANAC55(2)    --------->ANAC46 -------MYB111(1)           <---------ZAT14               <---------ANAC55(2)    --------->ANAC58---- >ANAC46----------->GT1   --------->GLK1(1)         <---------TOE2(3)          ---------->DOF2 ------   cctaacaagtatgtgaattccatatcagagttctctgtttctagcgatagttttaagaatacttgaccttgtttgatacgaataagccatgcgttttgat  19539500                             --------->ARR14(2)                             <---------ARR14(2)                   --------->ARR11(3)                   <---------ARR11(3)        <---------ARR14(2)   --------->ARR11(3)                      --------->ATHB12        --------->ARR14(2)   <---------ARR11(3)        <----------DOF2         <----------DOF2 ----ARR11(3)      --------->ARR14(2)              <-----------GT1  --------->ICU4 -->ZmHOX2a(2)     <---------ARR14(2)        <---------REM1(1)      <---------YAB1                 -- --->ARR11(3)     <---------CCA1(2)       <XXXXXXXXXXXXXXXXXXXXMIR161.1     ------->TEIL          ---   cttctctatggattcgaatcaaatcttcaagtatcttcaatgcctcgatgtagttacctttagcgatgtgatcatttgcatctttgtagggttttccctc  19539600                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                           --------->ANAC46                                                                                       --------------                                                                                      ---------->DOF2                                                    <---------ANAC58            ----------->GT1                                          <----------DOF2                       >>>>>>>>>>E2Fe                                       --------->GLK1(2)                        >>>>>>>>>>E2Fd                                      <---------GLK1(2) <---------ANAC58        >>>>>>>>>>E2Fc   ----                                      <---------ARR11(3)<---------ANAC58        >>>>>>>>>>E2Fa  -----        >>>>>>>>>TBF1        <---------ARR14(2)     <---------ANAC58           ----------->GT1  ----- --------->HVH21             --------->ARR14(2)  <----------DOF2               --------->LBD16  ----- ------>LBD16                <---------GLK1(2)<---------TOE1(3)               <---------ANAC46-------   cgtgatagaagaagaagactccattgtagacgattctcaagattctttaagctttcttgcttcagagagaaatttgtgaagcgggaaaaaaagaagcaac  19539700                                                     ----------->HVH21                                                    ------->MYC3                     ----------->HVH21                                                    <-------MYC3                    ------->MYC3                                                   <---------O2                     <-------MYC3                                                   --------->TGA1a                 --------->ANAC46                                                   <---------bZIP60(2)             --------->bZIP60(1)                                                   --------->ANAC55(2)             --------->ANAC58                                                   --------->ANAC58                --------->ANAC55(2)                                                   <---------ANAC46                <---------ANAC55(2)                                                   --------->ANAC46                <---------ANAC46                                                   <---------ANAC55(2)             --------->TGA1a                                                   <---------ANAC58                <---------ANAC58                                                   --------->bZIP60(2)             <---------ANAC58                                                   --------->O2                    --------->ANAC58                                                   --------->ANAC58                --------->O2                                                   ========================bZIP_DOF<---------O2                                                   <---------ANAC58                <---------TGA1a                                                   <---------TGA1a                 <---------bZIP60(1)                                                   --------->bZIP60(1)             --------->bZIP60(2)                                                   <---------bZIP60(1)   --------->TOE1(2)         <------------CBF                --------->TOE1(2)              <---------ANAC58        <---------GLK1(2)               <---------ANAC46                <---------ANAC46   --------->MYB52(1)                   <---------ANAC58                <---------ANAC55(2) ---------->ANAC81               <-----------TBP ------------->DYT1     --------->ANAC55(2) --->GAMYB                <---------ZAT2<---------ANAC55(1)             <---------ANAC58      ------- ---->ANAC58              --------->At4g35610  <-----------HVH21   --------->YAB1  <---------bZIP60(2) ---->ANAC58              --------->ZAT2<---------ANAC55(2)      <-----------TBP ------------->DYT1 ------>GT1              --------->GLK1(2)--------->ALFIN1      <----------DOF2<-----------HVH21 ---- -->MYB52(1)         >>>>>>>>>TBF1      <---------ANAC58        =============================bZIP_DOF   gaaaataacagaattgcatcgaagaagaagctgggttttataacgtgtgagtcacgtgacacaaggcttttataacgtgagagtcacgtgacacaagaat  19539800                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                             <---------ZAT18                ---------                       <---------HSFC1(2)<---------ANAC58    --------->ZAT14            --------->LBD16       <---------AHL20(2)                <---------ANAC58    <---------ZAT14           <---------HSFB2a(2)       --------->AHL20(2)  <---------ANAC46                --------->ANAC58            --------->HSFB2a(2)   ----------->TBP     --------->HSFB2a(1)                 --------->ANAC58           <---------LBD16   <---------AHL20(2)  <---------HSFB2a(1)    ----------->RAV1(1)                <---------GLK1(2) -->YAB1               --------->HSFC1(2)<---------ANAC46  --------->ANAC46    --------->LBD16 ----->YAB1    <------------CBF   <---------ALFIN1 <-------TEIL        --------->HSFB2a(2)  <--------   gatatataaaaaaatagcattgggaaatttcgtcgaacaccttgtgtgcaacatccatagcactccactacttcgaaaacccagaatttctgggaatctt  19539900      <---------ANAC58      <---------ANAC58                            --------->ANAC58 --HSFC1(2)                                       --------->ANAC58 ->HSFC1(2)                               <------NtERF2 --HSFB2a(1)                             <---------LBD16                                      <------ ->HSFB2a(1) <---------CCA1(1)          <---------LBD16                                     ------>MYB83 -KAN4(2)    <---------RVE1(1)          <---------ANAC46                                    ------>MYB46(1) >ARR14(2)  <---------ARR11(3)          --------->ETT(1)                 ---------->DOF2  ----------- >GLK1(2)   --------->ARR11(3)        <-----------HVH21                <---------YAB1     <---------- -ARR14(2)  <---------AHL20(1)       <-----------RAV1(1)            --------->ICU4    <-------TEIL   cgaattttgcttaagatatttgaatatagaatggtattcatgtcggggatgaacgaaaatcagacttgaaatgatcaaagaacagaggttcaccaaatca  19540000                                   <---------ARR14(2)                                   --------->ARR11(3)                                   <---------ARR11(1)                                   --------->ARR14(2)                              ------>MYB46(1)  <                                   <---------ARR11(3)                              ------>MYB83  <---                                   <-----------ARR10                            --------->MYB46(3) <-                           <----------DOF2                                     -------->P        ----   <----------DOF2    ---------->DOF2                                     --------->ZAT6         <--- ---ATHB12          --------->YAB1<---------CCA1(2)                    --------->YAB1       ------>ZmHOX2a(1) ---->AGL15         --------->AHL20(2)               --------->YAB1  <-----------GT1     ------>ZmHOX2a(1) -----AGL15         <---------AHL20(2)      <----------DOF2 <----------DOF2 <---------MYB52(2)   ----   agtagctttgggacataaacaattaaaagcttttgcaaatcttcgtcttttgtaattagaaacttttcatttttcatcactaaccaatctcctccttcca  19540100  Previous    Next  AGI:  At1g52430.1    Description:  ubiquitin carboxyl-terminal hydrolase-related. similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G51530.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G61950.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G52450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62486.1); contains InterPro domain Protein of unknown function DUF627 (InterPro:IPR006866); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394); contains InterPro domain Protein of unknown funct Range:  from: 19535019    to: 19539624    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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