Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->YAB1                                                                      <---------ICU4                                                                      --------->YAB1                                                                     <---------YAB1                             <---------MYB46(3)                    <---------ICU4                       --------->ALFIN1                            --------->YAB1                 --------->ANAC58                           ----------->GT1 --------->YAB1                 --------->ANAC58  <----------DOF2          <------MYB46(1)<---------YAB1     <---------At4g35610 --------->ALFIN1      <---------ZAT18    <---------YAB1 ----------->GT1     --------->At4g35610 <---------AtMYB61 <----------DOF2  <------MYB83<---------YAB1 --->DOF2        --------->ANAC46  <---------DAG2  ----------->HVH21 --------->ICU4   gagaggctgatgagtttttaagcaagtgtggtcgttcctttttgtcttttgcactcacagggaggtttattattattatcatatggtttttttttttttt  19509700                                                                           <---------ARR11(3)           <---------ARR11(3)                         <----------DOF2    <---------YAB1     <--------           --------->ARR11(3)                 <-----------GT1     ----------->GT1    <----------DOF2          --------->RVE1(1)                  <-----------GT1    <---------ANAC58     <---------DAG2          --------->CCA1(1)    <---------GLK1(2) <----------DOF2<---------ANAC46  <-----------GT1    ------>ZmHOX2a(1)      <---------At4g35610---------->ID1    <---------ANAC58<-----------GT1  <---   tttttcctacaaatatctacttagatttcatcagattgttttttttttttccttttcttttgtctggcctgtaacatgattttttcacttttcatcgttg  19509800                                       <---------AHL20(2)                                   <---------AHL20(2)                                  <---------ARR11(3)                                  --------->ARR11(3)                                  --------->AHL20(1)                                  <---------AHL20(2)                                  <---------AHL20(1)                                  --------->AHL20(2)   --------->AHL20(2)            --------->AHL20(2)   <---------AHL20(2)          --------->AHL20(2)                               <------ZmHOX2a(1) -ICU4                  ------>ZmHOX2a(2)                 --------->ZAT6    --------->TOE2(2)       - ------ANAC46         <---------ARR11(3)      <---------TOE1(2)             --------->TOE1(2)      <-   catatataattcttttgaagacttgatctctaaaaatatatttattctcatgttctactaacacttgaaatttttgaacataggaatgttttgagttaaa  19509900                                                                                                <----                                                                                                -----                                                                                             <-------                                                                                            ---------                                                                               <---------ANAC55(2)                                                                               --------->ANAC55(2)                                                                               ----------->GT1 ------                                                                   <---------GLK1(1)        <--------                                  <---------AHL20(2)               --------->GLK1(1)       <---------YAB1                     <------ZmHOX2a(1)                           <------ZmHOX2a(1)       --------->AHL20(2)    <---------MYB46(3)            --------->AHL20(2)           <---------TOE1(3)         --------->YAB1 -------->ATHB12--------->WRKY18(1) ---------->DOF2            <---------TOE2(3)        --------->ICU4 --------YAB1--------->MYB59      --------->YAB1      ----------->GT1     --------->YAB1<---------YAB1   tatgatttgttgaattcggtcgaggattatgtctaataaaaagtctcaagtatacaatgtgaattaaggaaatctataatctcgtaactaattataaatt  19510000                         --------->ICU4                                                         ----- -----AHL20(2)          <------------CBF                                                     -------- ---->AHL20(2)        <---------AHL20(2)                                       <---------AHL20(2)   < --AHL20(2) ---------->DOF2                        <----------ID1              --------->AHL20(2)   - >AHL20(2)--------->AHL20(2)         <---------AHL20(2)                        --------->AHL20(1)  -- --->AHL20(2)       --------->ANAC55(2)  --------->ZAT6                ----------->GT1       <------- -AHL20(2)<---------AHL20(2)   <---------ANAC46  ----------->GT1  --------->ZAT14            <-------   tataaaacaaaattaaaagtatatgtaattgttgagtattttttcactaaaatgtgacaaaattattctgaactcgttaaataaaatgttgagagacgta  19510100 -->TEIL                                          --------->MYB52(2) ->ANAC55(2)                                    <---------MYB52(1)                       <--------P ---------ETT(2)                               <-------GAMYB           <---------At4g35610     <----- -------->ETT(2)                              <---------ANAC58   <----------DOF2        --------->At5g28300 ------->DDF1        *TSS                     <---------ANAC58 <---------At4g35610   <---------LBD16 --ANAC46          <-----------GT1       <-----------RAV1(2)<-----------GT1       ------>ZmHOX2a(1) --ANAC55(2)      <-----------GT1        ---------->CDC5   <-----------GT1   <---------At4g35610   tgtcgacgctcttcttctattaaacctcttcttcgtctctggctcagggcgttagtttttttttccgcttctctgctactgctccttcgcggtaagtctt  19510200                   <----------DOF2               --------->LBD16                                                                     <-               ------>NtERF2            <---------ARR11(3)                                       <---              --------->DEAR3(1)   <---------TOE2(2)                                            -----             <---------LBD16       <---------TOE1(3)         <------------------------ANAC81    <----           --------->ANAC46        <---------TOE2(3)  <---------MYB52(1)                        <----      <-----------GT1   <---------ANAC46--------->ARR11(3)<----------DOF2    <-----------GT1  <------ -----DOF2------>ZmHOX2a(1)   <---------TOE1(3)   --------->LBD16<---------AHL20(2)    <---------ANAC46   tcccattttctcctcgccgggcattttcgtctaagcttaggttatcttcatccccagttactttgattttttttttttttttcttctcgtcgtgttgttt  19510300                                                                                                <----                                                                                                <----                                                                                       -------------- <---------ANAC46                                                                      <------------- <---------HSFB2a(2)                                                                  <-------------- --------ANAC46                                            <---------TOE1(3)          ---------->ID1 ----GAMYB                           ----------->HVH21     <---------TOE2(3)         <-----------GT1 ---->MYB52(2)                <---------AHL20(2)       <-------GAMYB                ----------->HVH21 -----MYB46(3)                --------->AHL20(2)      <---------MYB46(3)         <---------ARR14(2) -------RAV1(1)         <----------DOF2    <---------MYB52(1)                    --------->ARR14(2) < ---ANAC46     --------->ANAC46  <---------YAB1   <---------YAB1          <-----------GT1       <----   gttgtggaaatagttatcggccatttctttattttattcttgacagtttgttttgatggttagggtttttagaatttaactcgtatttgacccatttggg  19510400                                        <----------DOF2                                       <---------ANAC58                                       <---------ANAC46                                       <---------ANAC58                                   <-------GAMYB                                  --------->MYB52(2)    ------>ZmHOX2a(2)             <---------ANAC58 ---GAMYB                         <---------ANAC58 -----ANAC58                     <-------TEIL --->AGL1                        --------->ZAT18 ----AGL1                     <---------ANAC58 ---AG     --------->AHL20(2) <---------ANAC58 ---------YAB1               <---------MYB46(3)                                                    -- -----ANAC58             <---------ATHB51 <---------YAB1           ---------->DOF2               ----   ttgtgatcgaattttaaatctcttcgaataatgggtgcgttgctttgattactcggttcttatattgttgaaagctagaatcaatttgaatttgaatcaa  19510500                     <---------ANAC58                     <---------ANAC46                     <---------ANAC58                                      --------->YAB1           <---------AtMYB61                                              <---------ATHB12       <---------ZAT18                                               <------ZmHOX2a(2)            <--       --------->ZAT14                                              <---------ARR11(3)          <----       <---------ZAT14                   ------->TEIL               --------->AGP1             ------       --------->ZAT18          <----------DOF2                     --------->ARR11(3)        <------ ------->ZAT18    <----------DOF2       <---------CCA1(2)           --------->ARR14(2)        ------- ----->ANAC46 ---------->ID1    --------------------->WRI1          <---------ARR14(2) <-----------GT1   ctccactagtgcattggtccctttcgtgcaactcctttgtctgaatcttatacatagatttagaatagtagatccactcatgttgattttttcattactt  19510600  Previous    Next  AGI:  At1g52360.1    Description:  coatomer protein complex, subunit beta 2 (beta prime), putative. Identical to Coatomer subunit beta'-2 [Arabidopsis Thaliana] (GB:Q9C827;GB:Q8GX79); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT3G15980.1); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT3G15980.2); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT3G15980.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO45935.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59846.1); similar to Range:  from: 19502831    to: 19509839    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g52370.1    Description:  ribosomal protein L22 family protein. similar to ribosomal protein L22 family protein [Arabidopsis thaliana] (TAIR:AT4G28360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39875.1); contains InterPro domain Ribosomal protein L22/L17; (InterPro:IPR001063); contains InterPro domain Ribosomal protein L22, bacterial-type; (InterPro:IPR005727) Range:  from: 19510121    to: 19512543    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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