Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ANAC58                                                                   --------->ANAC55(1)                                                                   --------->ANAC58                                                                   --------->ANAC46                                                    <---------CCA1(1)                                                   <---------AHL20(1)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                   --------->AHL20(1)       --------->At4g35610                                               ---------->DOF2  --------->ZAT18                                            --------->YAB1      --------->ZAT14      ---------->DOF2                                          --------->AHL20(2)    <---------ZAT18    <---------ZAT14 ---------YAB1                           --------->YAB1 <---------AHL20(2)  <---------At4g35610 >ZmHOX2a(1)                          --------->YAB1<---------RVE1(1) --------->MYB52(1) ---GT1 ----------->GT1   --------->YAB1--------->AHL20(2)      <---------ZAT14    --------->ZAT18   ttctaataagaggtttttaaactaaaaatcatcgttttaaaaataaaaataaagatatttaagtagtgcacgcaagggacctgagtgcaaagaacagtct  19499800                                                                     <---------O2                                                                     <---------bZIP60(1)                                                                     --------->TGA2(1)                                                                     --------->O2                                                                     <---------ANAC46                                                                     ----------->GT1                                                                     <---------TGA2(1)                                                                     --------->bZIP60(1)                                             <-------MYC3           ----------->STF1          <-----------RAV1(1)                ------->MYC3           <-----------STF1     --------->ANAC46                        <-------MYC2          <---------TGA2(2)     <-----------------AGL1              <---------ZAT18          ----------->HVH21    ------>MYB83                  --------->YAB1                  ----------->TGA1    ------>MYB46(1)            --------->YAB1------->MYC2 --------->TOE2(3)                   -------    -------->P             --------->ZAT6--------->ZAT18  --------->YAB1                      <------   ------>ZmHOX2a(1)  <---------LBD16    <-------TEIL     --------->TOE1(3)                  <-------   aaatcctaccccatgttgcaatactacggacactaatcacaagtacacatgcctagataaccatagctatgacgtcaaaaccatgccccttaactatatc  19499900               ----------->RAV1(1)            --------->ANAC46           --------->LBD16        ------>MYB46(1)                                 --------->TOE2(3)        ------>MYB83                                --------->AHL20(2)      --------->DEAR3(1)                        --------->AHL20(2)      <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->AtMYB61                         <---------AHL20(2)      <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-----------GT1                             ----------->GT1     --------->At4g35610 -->ARR11(3)--------->ANAC58         --------->GLK1(2)  <----------DOF2<xxxxxxxxxxxxxxxxsmallRNA(i) ---ARR11(3)--------->ANAC58        <---------GLK1(2)<-----------GT1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --CCA1(2)--------->LBD16     <---------ZAT6<---------AHL20(2)   --------->GLK1(1) <-------GAMYB <---   ttataacacctcccgagcaacatatatgaatagtgaaagattctatttagttaattaactttagagcatctccaacgctgggctctgttgatattttgca  19500000                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 <---                                                                 <---------ZAT14                 ----                                                                 --------->ZAT14                -----                    --------->AHL20(2)                           --------->REM1(2)              <----          <---------YAB1    --------->YAB1                <------NtERF2                       <------       <---------YAB1    --------->YAB1                 <---------ANAC58             <---------At4g35610 ------At4g35610<---------YAB1        ---------->DOF2   <---------ANAC58             --------->At4g35610   gaggctctcttgattattttgattaaaaaataatcaaatcgaaagaaaaacgagagaggcgtctctgtgtagagagtttatgagggaagcagagaggcgg  19500100   <-----------HVH21 <-------MYC2 ------->MYC3 ------->MYC2 -------->ABF1 <-------MYC3 <-------MYC4 ------->MYC4 =====================================bZIP_DOF ---------ANAC55(2) -------->ANAC55(2) --------ABF1 -------->O2 =====================================bZIP_DOF ---------TGA1a                                 <---------AHL20(2) -------->TGA1a                                <---------AHL20(2)          *TSS ---------O2      <---------ANAC58             --------->AHL20(2)    <---------------AtSPL8 ------ARR14(2)   <---------ANAC58             <---------AHL20(1)    --------------->AtSPL8 ----->ARR14(2)  <---------MYB46(3)   ----------->GT1                <---------------AtSPL3 ->NtERF2     <------------CBF        <----------ID1            <---------YAB1 --NtERF2    --------->ATHB12      ---------->DOF2              --------->ICU4                      < ---ANAC46  <-------TEIL   <----------DOF2     --------->AHL20(1)<---------ICU4           <----------   acacgtgtcatacattcattggttgtcttctttaaacaaaaggaaaaaataaaatttgcacatctcattattttgtacgaacaaaatcgttttctctctc  19500200                         ----------->GT1                   ----------->RAV1(1)                  --------->ANAC46                                              <---------ANAC58                  ----------->HVH21                                             <---------ANAC58                --------->O2                                               <---------MYB46(3)                --------->ANAC58                                         <---------MYB52(1)                <---------TGA1a                                         --------->LBD16                --------->ANAC55(2)               --------->YAB1      <------NtERF2                <---------ANAC55(2)           --------->ATHB12       <---------RAP2.3(1)                --------->ANAC58             <---------ATHB12        ------>NtERF2                --------->ANAC46             <------ZmHOX2a(2)      --------->ANAC46                <---------O2      <---------AHL20(2)             --------->WRKY12                --------->TGA1a   --------->AHL20(2)             ----------->HVH21                 <-             ----------->HVH21    --------->AHL20(1)      --------->At4g35610<---------WOX13(1)    -- ---------At4g35610<<<<<<<<<<<<<<<<<LFY      <---------YAB1    --------->At4g35610    <----------DOF2 -GT1       <-----------HVH21    --------->AHL20(2)   --------->GLK1(2)<---------DEAR3(1)          --   tctgcttctgtctctctcacgcgacattggaaaaaaaaaattgctcgatcattgataatccgatgagttgacgccggtgattgtttgtcttttgatgtgt  19500300                                                              <------NtERF2                                                             --------->RAP2.6(2)                 --------->LBD16                            <-----------------AGL1               <---------LBD16                              <-----------------AG                -----              ------->GAMYB --------->ANAC46     --------->At4g35610                            <----             --------->DEAR3(1)                  <---------LBD16                --------->ARR14(2)             --------->ANAC46  ----------->RAV1(1)          ----------------->AG<---------ARR14(2) --------At4g35610   <-------TEIL<-----------RAV1(2)        ----------------->AGL1   <---------GLK1(2) --------->RAV1(2) --------->ARR14(2)          <---------DEAR3(1)   ----------->GT1  <---------ARR14(2) ------->At4g35610 <---------ARR14(2) <-------TEIL  <------NtERF2  ----------->GT1   --------->ARR14(2)   tatctgaggcttccaacgccggattcatcaaggcaacaggtgcttcacatcggcggaagttggccgaaatcggaaaatagcaaatcggattcgaagagta  19500400             --------->LBD16            --------->HSFB2a(2)            <---------HSFB2a(2)      ------>NtERF2     --------->ANAC58     --------->DEAR3(1)     --------->ANAC58    <------NtERF2    --------->ATERF1(1)   ------>NtERF2                                   --------->ATHB12   <---------ATERF1(1)      ------->TEIL          <---------YAB1  --------->At1g77200<------MYB46(1)            ----------->GT1  ----------->HVH21  <---------ANAC46           <---------ANAC58                  <-------GAMYB<-----  <---------DEAR3(1) <------MYB83               <---------ANAC58       <---------MYB46(3)    <-------  --------->DEAR3(1) <---------ANAC55(2)    <---------AHL20(2)      <------MYB46(1) <---------MYB46(3) --------->RAP2.3(1)--------->MYB111(1)    --------->AHL20(2)       <------MYB83<---------TOE1(3) ---->ARR14(2)      --------->MYB59       <---------YAB1           --------->MYB111(1)       <------- -----ARR14(2)      --------->MYB46(2)<-----------TGA1   --------->ARR11(3)     <---------TOE2(3)   atcgccgacgccttccccaagttaggtatgaatcaattctcgtcattatatcgtgattagatgttgtatttggtggtttattagggttgtgagttaagga  19500500                                                                              <---------MYB46(3)                                                                              <------MYB46(1)                                                                              <------MYB83                                                                             <---------AtMYB61                                                                            <--------P                                                                           <---------ANAC58                                               --------->ARR11(1)          <---------ANAC58  --------->TOE2(3)                            --------->ARR14(2)         --------->MYB55(2)  --------->TOE1(3)        <---------AHL20(2)  <---------ARR14(2)         <---------MYB46(3) -ZmHOX2a(1)              --------->AHL20(2) ----------->ARR10            --------->ATHB12     <<<<<< --TOE2(3)  <---------GLK1(2)                <---------TOE2(2)           <---------AtMYB61    <------ --TOE1(3)<---------YAB1  <---------AHL20(2) <---------TOE1(2)   --------->YAB1   <---------MYB46(3)   gaaaccttatacatgattcttcagtttataaatttgacaattagtcgtagatttggattttgctctataatggtattggttggtttgttctgtttttatc  19500600        <---------ICU4     -------->HAHB4                          --------->ANAC55(2)     --------->YAB1               ---------->DOF2                                      <---------ZAT6    <---------ATHB12             --------->AtMYB61                                 --------->ZAT14    <---------YAB1               ------->GAMYB  --------->ATHB12            <---------ZAT6    -------   <---------TOE2(3)            --------->MYB46(3)                    <---------MYB46(3)<-----------HVH21 <<<GATA-1          <---------WRKY18(1)      <---------ANAC58     <---------YAB1   <---------ZAT14 -- -----GT1          --------->WRKY38(1)       <---------ANAC58------->TEIL --------->MYB52(2) <-------   tatctaatgatacttacattgttgactggattcaaccaaagctacttacttgatttgagaatgaaactatgtttgttagtggtattgcagtgttagaggt  19500700  Previous    Next  AGI:  At1g52347.1    Description:  other RNA Range:  from: 19500175    to: 19501372    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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