Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------RVE1(1)                           <---------ARR14(2)                           <---------MYB52(1)                       ------>NtERF2                       <---------At4g35610                     <---------RAP2.6(2)     <----------DOF2<---------At4g35610     --------------->AGL15 --------->ARR14(2)                        --------->GLK1(2)     <---------------AGL15<---------RAP2.6(3)                       --------->ARR11(3) ----->ANAC58      <-----------RAV1(1)                              <---------GLK1(2) ----->ANAC55(2)<---------ICU4                           --------->TOE2(3) ------ANAC55(2)--------->ATHB12           --------->At4g35610  ---------->DOF2                    -- ----->ANAC58  <---------YAB1              <---------At4g35610 <---------AHL20(2)                  -- -->MYB46(3)  <---------GLK1(2)       <----------DOF2   ----------->GT1                   <---------TOE2(3)   cgtattcctttaaaaagattattgctgccgatatttagtactttgagatgaaacaacatcgttatataaagattctgacgaataagcattttaagaaaaa  19496000                                                                          <---------AHL20(2)                                                                          --------->ATHB12                                                                          <---------ICU4                                                                          --------->ATHB51                                                                          -------->ATHB1                                                                         <---------YAB1                                                                         <---------ATHB51                                                                         --------->ICU4                                                                      <---------YAB1                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                                  --------->AHL20(2)       ----------->RAV1(1)                                      --------->AHL20(2)      --------->ANAC46            --------->ANAC55(2)          --------->YAB1    --------->AtMYB61             <---------ANAC55(2)          --------->AHL20(2)                  --   --------->MYB46(3)     <---------WOX13(1)                ----------->GT1        --------->ANAC55(2) --------->ARR14(2)     --------->ATHB12                 --------->YAB1--------->YAB1           <---- ------->ANAC58        <---------YAB1       --------->YAB1  --------->YAB1-------->HAHB4       <----- ------->ANAC58      <----------DOF2 --------->MYB52(1)<---------YAB1--------->AHL20(2) <---------YAB1   caagaaccacaacacaatttctactttgattgaaatacttaacgaatcaaaataaccatgaataataaaaatataattattgtttacatgatgaattgat  19496100                                                                                                    <                                                                                             --------                                     >>>>>>>>>TBF1                               <---------ALFIN1   -                                  >>>>>>>>>TBF1    --------->ANAC58              --------->REM1(1)  -                                ------------------------>ANAC81                 ------>MYB83<------ZmHOX2a(2)                            >>>>>>>>>TBF1  >>>>>>>>>TBF1       <-------TEIL     ------>MYB46(1)     < ------->CCA1(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                -------->P <---------ARR11(3) -----YAB1               >>>>>>>>>TBF1  >>>>>>>>>TBF1     --------->YAB1      <---------MYB59------>ZmHOX2a(2) ----TOE2(3)   <---------ANAC46>>>>>>>>>TBF1       --------->ANAC58     <---------YAB1     --------->ARR11(3)   gatatgtgttatttgtggagggatgaagaagaagaagaagaagaagaagaaggaagccattgatattcatgttgatgatacctacacttgaacgatcttg  19496200                                                --------->AtMYB61                                                <---------ALFIN1                                                --------->DEAR3(1)                                           <-----------TGA1                                           <-----------HVH21                                          --------->ANAC46                                          --------->DEAR3(1)                                          --------->DREB2C(2)                                         <------NtERF2                                        ------>NtERF2                                       --------->DEAR3(1)                                       <---------ALFIN1                 <---------ANAC58                                     <---------ATERF1(1)                <---------ANAC46                                     --------->ABI4(1)                  <---------ANAC58                                     ------>NtERF2                     <------NtERF2         <-------                                    --------->DEAR3(1)                ------>NtERF2         <--------                  --------->ANAC58  --------->DREB2C(2)               --------->ABI4(2)    --------->ANAC46           --------->ZAT14          --------->DEAR4(1)                <---------MYB46(3)   --------->DREB2C(2)         --------->At5g28300        ------->GAMYB                    <---------DEAR3(1)    --------->DEAR3(1)       <---------DEAR3(1)           --------->RAP2.6(2)            <---------MYB46(3)     <------NtERF2    ----------->HVH21               --------->ANAC58              <---------DEAR3(1)     ------>NtERF2 ---------HSFC1(2)--------->ANAC58  --------->ANAC46            --------->MYB52(1) --------->At4g35610 ------------->WRI1              <---------ALFIN1          ----------->HVH21<---------ALFIN1<-------- -------->HSFB2a(1)          <----------DOF2   --------->MYB46(3)--------->At4g35610    <XXXXXXXXXXXX -------->HSFC1(2)<---------ALFIN1 --------->MYB46(3)      --------->WRKY38(1)    <-----------RAV1(1) ---------HSFB2a(1) <---------ALFIN1--------->ANAC58      --------->At5g28300     <---------MYB46(3)   gatgcttcgacggtgaacacacacacttcttctttccaccgccaccgtcaccaccgctacggtgaccagcggtggcttccacatctgttgccaccgtcac  19496300                             <---------LBD16       --------->LBD16   <---------ARR11(3)     <------NtERF2<---------LBD16     <---------LBD16     --------->ARR11(3)    --------->MYB52(1)  --------->At4g35610    ------>NtERF2<---------ANAC58   <---------ALFIN1     <---------At4g35610                                          --------->ANAC58 --MYB52(1)      <---------ANAC58                                                    --------->ANAC46 ---TGA1    <---------ARR14(2)                                                       --------->ANAC58 ---HVH21   --------->ARR14(2) --------->LBD16                                     --------->ZAT6   < XXXXXXXXMIR834  <---------ANAC46  <------ZmHOX2a(1)                    <---------AHL20(2)         --   ttctgccaccggagtattttcgtggaagctctccggaggaataacaagaggtagaagaattttgtaacacatatttttttgtttcacactcaacacaaaa  19496400                                  <---------AtMYB61                                --------->ALFIN1                      <---------ARR11(3)                      <---------GLK1(2)                      --------->ARR11(3)                             <-----------HVH21       --------->GLK1(2)    <---------ANAC58                         <-----------TGA1              --      --------->ARR11(3)    <---------ANAC58            <---------ANAC46                       <-----      <---------ARR11(3)    <---------ANAC46            ----------->GT1                      --------      <---------GLK1(2)   <---------ANAC46        --------->DAG2    --------->ANAC46      --------->AHL20(2) ---------AHL20(2)  <---------TOE2(3)            ---------->DOF2    --------->bZIP60(2)  --------->AHL20(2) ------->AHL20(2)   <---------TOE1(3) *TSS  ---------->DOF2 ----------->TBP            --------->YAB1   atttaaaagattcttcttatttaagattttgtgtgtgtggtttaccaaaagaaaagtcgagtataaatactcgtcactcttgataacaaaaataaaaaag  19496500                                          --------->ANAC55(2)                                          <---------ANAC55(2)                                 <---------YAB1                               --------->AHL20(2)                              <---------AHL20(1)                              <---------AHL20(2)                              --------->AHL20(2)                           <---------AHL20(2)                                                      <-                   --------->HSFB2a(2)   <-------TEIL                                              <-                   <---------HSFB2a(2)  <-----------GT1                        ------>NtERF2      ---            <-----------------AG--------->AHL20(1)                            <---------ETT(2)    ---   <---------ARR11(3)      --------->AHL20(1)                     XXXXXXXXXXXXXXXXXXXX>MIR391     ---   --------->ARR11(3)      --------->AHL20(2)                   <---------ANAC58      =============== -------->DOF2  <----------DOF2<---------AHL20(2)               <---------ANAC46      ---------->DOF2 -----ID1  <-----------GT1<---------AHL20(2)        <----------DOF2        <---------REM1(1)      --- -->DOF2--------->MYB52(2)--------->AHL20(2)    <-----------GT1 <---------ANAC58<------NtERF2     ---   aaaaagatgttagtcactcttttggaaattaaattattttagttacatatttatcttttaggtgtttcgtagaagagatgtcgccaaacaaagtttcgaa  19496600      -------->ABF1      ------->PIF5      <-------MYC3      <-------MYC2      <-------PIF5      ------->MYC3      ------->MYC2      ------->MYC4      <-------MYC4     --------->TGA1a     --------->ANAC46     <---------TGA1a                                                                             ----     --------->ANAC55(2)                                                                    ------>ZmHOX2a(2)     --------->O2                                                                           =========     <---------O2                                                                          ==========   <---------ALFIN1                                                                        <------ZmHOX2a(2) ----------HVH21                                                                          --------->ARR14(2) ----------TGA1                                                                      <---------ARR14(2) ------>ANAC58                                                                       --------->ARR14(2) ------>O2  --------->MYB52(1) --------->HSFB2a(2)                                  <---------CCA1(2) ------>bZIP60(2)              <---------HSFB2a(2)            <-----------HVH21     <---------GLK1(1) ==============bZIP_DOF    --------->ANAC58                  --------->bZIP60(1)   ---------->TaMYB80 ------>ANAC46             --------->ANAC58                  <---------bZIP60(1)<---------ZAT6   <--- ------>ANAC58            ------->TEIL          ---------->DOF2              >>>>>>>ZML2  <---------ARR14(2)   acgtcacacgtggctaatggttttgatgcacgtctagagatttgtgttcagaaagaaaccatgaggtcagaaatttgttctagtgtatatccgatcttat  19496700             --------->AHL20(1)             --------->AHL20(2)             <---------AHL20(2)            --------->ICU4            <---------AHL20(2)            --------->AHL20(2)            <---------ATHB51                            ---------->DOF2        <------ZmHOX2a(1)                      <---------AHL20(2)      <---------TOE1(3)                        --------->AHL20(2)               --------->ANAC58      <---------TOE2(3)                        <---------YAB1                 ---------->DOF2 ----->AHL20(2)                               --------->AHL20(2)         <---------YAB1 ==============HOX2a_HOX2a                    <---------AHL20(2) ---------->DOF2--------->ANAC58  --- ==============HOX2a_HOX2a              <---------TOE2(3)   ---------->DOF2 <---------YAB1  <-------- ------AHL20(2)     ----------->TGA1 <---------YAB1  --------->At4g35610 <---------AHL20(2) <--------   aaatttttaaggaaataatttgatgacgagagaaatattgttatggattttaattagctaaagaaagaaaagaatattattaaagcaagttttttcttgc  19496800          <------MYB83                                           ----------->GT1                   --          <------MYB46(1)                                      ---------->DOF2             ----------     --------->ALFIN1                                       ----------->GT1               <---------ARR14(2)  --------->ARR11(3)                                  <---------AHL20(2)                  --------->ARR14(2) ------->DOF2                                        --------->AHL20(2)                  <------ZmHOX2a(1) -ANAC58  <---------MYB46(3)                       --------->ARR11(3)            <---------WOX13(1)<- -ANAC58 <---------AtMYB61   <---------AtLEC2      <---------ARR11(3)          --------->ATHB12   ---   gaaagatgtggatggtggaccataactctttggatgaaacaaattggtttggagattttatatggtaaagagaaaatgaagtgattggagaggataagcg  19496900  Previous    Next  AGI:  At1g52342.1    Description:  unknown protein Range:  from: 19495924    to: 19496438    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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