Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ---------->DOF2                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    ------------------------>ANAC81                                                                   --------->DAG2                                                                  ---------->DOF2                                                                --------->AHL20(2)                                                                --------->YAB1                                                                <---------AHL20(2)                                                             --------->YAB1       <-----------GT1                                      <---------YAB1                         <-   ------->TEIL                                           --------->YAB1                     -------- ->ANAC58                    ----------->GT1             <------ZmHOX2a(2)                  <------ZmHOX2a(2) ->ANAC58     <---------AHL20(2)                        <---------ARR11(3)                 --------->ARR11(3) >DOF2 --------->ZAT6  --------->YAB1                   --------->ARR11(3)                 <---------ARR11(3)   aaatgtatatcactagtttattgaatcagaactgataaaactaatccaaatgtttgaagatcataataaaaagcaaagagactgaaacctagagatcata  19494900                                                         =======================bZIP_DOF                                                         <---------TGA1a                                                         <---------O2                                                         --------->TGA1a                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                   --------->GLK1(2)                                                   --------->ARR14(2)                      --------->WOX13(1)           <---------ARR14(2)                     <---------AHL20(2)           <---------CCA1(2)                     --------->AHL20(2)       ------>ZmHOX2a(2)           ----------->HVH21                 <------ZmHOX2a(2)         --------->CCA1(2)                  <---------AGP1           ---------->DOF2        <---------ARR11(3)                  --------->ARR11(3)<---------At4g35610     ----------->GT1 --------ICU4       <---------ATHB12        <---------ARR11(3)<---------ZAT2  --------->YAB1 ->YAB1 --------->ARR14(2)   --------->YAB1<---------CCA1(2)  --------->At4g35610  ------->TEIL   aacatttcaagatttgacatcaataaatcaaacagaaccatgactagatctcaaatctgtcgtgagcagagcaaagacactcatgaaactgaaaaaactc  19495000                                                                                 --------->DAG2                                                                                ---------->DOF2                                                                             ----------->GT1                                                                            <---------------AtSPL8                                                                            --------->DAG2                                                                          ---------->DOF2     <------ZmHOX2a(2)                                                                    ----------->GT1           =======                 <---------MYB52(1)                                 <----------ID1           --------               ----------->GT1                              <-----------------AGL1           <-------    <---------YAB1             ---------->DOF2              ----------------->AGL1    <---------DOF5.7(2)   catggtctgattatcaactgttaatttgaccctcaaagaacaaaatttcagtatttagaatgacccaagaaggaaaaaaaggtaaagtaaacgaagatca  19495100                                                                                       --------->WRKY12                       --------->DAG2                                                <-------GAMYB                      ---------->DOF2                                               <---------MYB46(3)                --------->At4g35610           --------->WRKY45                      --------->MYB52(2)              <-----------RAV1(2)             --------->WRKY38(1)          --------->GLK1(2)  ---------->DOF2  <------ZmHOX2a(1)          --------->WRKY12            <---------ARR14(2) =========================HOX2a_HOX2a       <----------DOF2      --------->YAB1 <---------ZAT6 ->ARR11(3)  <------ZmHOX2a(2)  ---------->DOF2      <------ZmHOX2a(1)    --------->ARR14(2)       <- --ARR11(3)  =============HOX2a_HOX2a   <---------CCA1(2)     --------->YAB1<-------TEIL    <--------   aacaaaaagagttggatcagaggaaaaagttggagaaagcttatacctttgactaggaagagaagaataagaagaagattcagtgttcgttgacataata  19495200                  <----------DOF2              ------>ZmHOX2a(2)             =======================HOX2a_HOX2a             <------ZmHOX2a(2)            --------->ARR11(3)            --------->AGP1                                               --------->ANAC58            --------->ARR14(2)                                           --------->ANAC58            <---------AGP1                                               --------->AtLEC2            <---------ARR14(2)                                         --------->YAB1            <---------ARR11(3)                                        <---------ATHB12           <---------CCA1(2)                                       <------ZmHOX2a(1)          ----------->ARR10                                     <---------LBD16        =============HOX2a_HOX2a <---------REM1(1)              <-----------RAV1(2)                 <   <---------At4g35610<---------YAB1         <---------YAB1  --------->ZAT2                        <- ---------DOF2======================HOX2a_HOX2a             --------->ANAC58                       <- -YAB1  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)              --------->ANAC58   <---------ALFIN1    <-   gctttagctccttagatcttctttcttattcctcgatgtagtgcctcactattgacacagacaagctcaggaatcatgcaaacacctctcaatcggagtt  19495300                  <---------ANAC58                  <------MYB83                    --------->ANAC58        <---------LBD16                       --------->ANAC58  <------------CBF <---------MYB52(1)     <---------DEAR3(2)    --------->ANAC58 --------->ATHB12 -------GAMYB<----------DOF2   <---------REM1(2)  --------->ANAC58                                  - --------ANAC46   <---------ANAC58           --------->DAG2  <-----------HVH21                     <- --------ANAC58   <------MYB46(1)           ---------->DOF2  <-----------TGA1         <------------CBF --------ANAC58  *TSS <------NtERF2      --------->YAB1------>ZmHOX2a(1)<-----------TBP        ------   tgcgttgtttctcggctatttggtgtcggtctctatacggctatcaaaaagcaagtcctgcttcgtcattgggtttttatgggccttaaattgtaagccc  19495400                                                                                          ===========                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                   --------->MYB52(1)                                                                                   ------>MYB46(1)                                                                              ------>MYB46(1)                                                                              ------>MYB83------>ZmHOX2a(2)                                                                            <---------MYB52(2)                                                                            --------->AtMYB61                                                                            <---------MYB111(1)                                                                            --------->MYB46(3)                                                                            <---------MYB55(2)                                                                            <---------MYB46(2)                                    --------->LBD16                         <---------MYB111(2)             <---------ARR14(2)    <---------ANAC58                        --------->ANAC58        --------->MYB52(1)         <---------ANAC58                        --------->ANAC46 ---------->DOF2       --------->YAB1 <---------ARR14(2)        <------ZmHOX2a(2)  ------>MYB83 -------->AHL20(2)    ---------->DOF2 --------->ARR14(2)       --------->ARR14(2)--------->AtMYB61 --------ATHB12  >>>>>>>>>>WRKY63  <---------ANAC46            <---------ARR14(2)<---------MYB59 ------>CBF  --------->ARR14(2)   <---------LBD16 <---------MYB52(1)       --------->ANAC58   aataaaagactaacggatttgactataagcacattttgcggattttagagacgttaagttagaccgatccaatttgcaccaaaccaaaccgatccgattt  19495500                       <---------ANAC55(2)                   --------->ATHB12                  <---------YAB1                --------->YAB1                                                              ---------                <---------ICU4                                                          <------MYB83               <---------ATHB51                                                         ----------->GT1               --------->ICU4                                                         <---------ANAC46          --------->CCA1(2)                                                        <-----------RAV1(1)        <------ZmHOX2a(1)                                                          <---------ZAT6      <---------TOE1(3)--------->ANAC55(2)             <------------AtMYB77    --------->ZAT14      <---------TOE2(3)--------->YAB1            <-----------ARR10             <---------ZAT14 ==============HOX2a_HOX2a                      <---------ARR14(1)        <---------At5g28300    <--- ==============HOX2a_HOX2a           --------->GLK1(1) --------->DEAR3(2)<-----------GT1<------MYB46(1)   agaaaattaaggatacaattatgattcgtaatcgaaccgaaatccaaaccgtatcaaaccgtccatgatacagaattacagtatagtgttgggttatttg  19495600                                                                      <-------MYC3                                                                    <-------MYC2                            <------ZmHOX2a(2)                       ------->MYC2                       <---------MYB52(1)                 --------->ARR11(3)                      <-----------HVH21                <---------WOX13(1)                <------ZmHOX2a(2)                    <---------ICU4 <-------MYC3      <---------DAG2  --------->LBD16                --------->ATHB12 ------->MYC3      <----------DOF2<---------ANAC58               <---------YAB1  ------->MYC3   <-----------GT1   <---------ANAC58      --------->YAB1 <---------ARR11(3) >MYB52(2)     <---------ARR11(3)          --------->ATHB12 ------>ZmHOX2a(2)                -------- ------TOE2(3) --------->ARR11(3)     <-------TEIL  --------->ICU4  <-------MYC4  ------->TEIL     <-   tggtttcactttctgtagatcatccgtgagatcgattacattcattcatgggtcatgattgatcttcgcacatgtgtttctacgaattttcacaaatgta  19495700                                                                             --------->ATHB51                                                                             <--------ATHB1                                                                             <---------ICU4                                                                             -------->HAHB4                                                                            <---------ATHB51                                                                            --------->AHL20(2)                                    <---------HSFB2a(2)                     <---------AHL20(2)                                    --------->HSFB2a(2)               <---------ANAC46            <---------RVE1(1)    ------->TEIL                         ----------->GT1 <---------TOE2(3)       ---------->DOF2                              <---------ANAC58 --->GT1   <---------MYB52(1)   <---------CCA1(2)                     <---------ANAC58 --------AHL20(2)      <---------ZAT6----------->GT1                  <---------ANAC55(2)  --------->ZAT14   atttatgttttccgatatttctctagtgaaagttgtatctcgaaaattgaaactccaaaaccatatgaaaatgcgtaaataattgtgaagaagtatagtc  19495800  Previous    Next  AGI:  At1g52340.1    Description:  ABA2 (ABA DEFICIENT 2); oxidoreductase. Identical to Xanthoxin dehydrogenase (ABA2) [Arabidopsis Thaliana] (GB:Q9C826); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G51680.1); similar to short-chain dehydrogenase/reductase [Solanum tuberosum] (GB:AAT75153.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 19493463    to: 19495317    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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