Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->At4g35610                                                      <---------At4g35610                                                   --------->TGA2(2)                                                  <-----------TGA1                                                  <-----------HVH21                                                 --------->bZIP60(2)                                                 <---------bZIP60(1)                                                 --------->bZIP60(1)                                                 <---------O2                                                 <---------TGA1a                                                 ====================================MYC_MYB                                                 --------->O2                                                 --------->ANAC58                                                 --------->TGA1a                                                 <<<<<<<<<<AtbZIP1                                                 --------->ANAC46                                                 ====================================MYC_MYB                                              <------NtERF2                                             --------->ABI4(1)                                             <---------ATERF1(1)                                             ------>NtERF2                                             <-----------HVH21                                            --------->RAP2.3(3)                                            --------->ANAC58                                            --------->RRTF1(2)                                            --------->ANAC46                                            --------->DEAR3(1)                  <----------DOF2           --------->RAP2.3(2)                  =========================================bZIP_DOF              <---------ALFIN1              --------->ATERF1(2)             ------>MYB46(1)                <---------ATERF1(2)           <---------ALFIN1                 --------->DREB2C(2)           --------->DEAR3(1)               --------->RAP2.6(2)           --------->AtMYB61               --------->ERF1           <---------MYB111(2)             --------->ORA47(2)           <---------MYB111(1)             --------->ATERF1(1)          <---------ZAT2                   --------->RAP2.6(1)          --------->bZIP60(2)              --------->RRTF1(1)          --------->ZAT2                   --------->RAP2.3(1)         ------>NtERF2                    ------>NtERF2         <---------ATERF1(1)              --------->LBD16        --------->DEAR3(1)                <---------At4g35610        <---------ALFIN1                  --------->At4g35610      ------>NtERF2                       <---------RAP2.3(1)      <---------ATERF1(1)                 <---------ATERF1(1)                         ------->GAMYB      --------->LBD16                    --------->ANAC46                            <---------MYB111(2)      <-----------HVH21                 <---------LBD16                              --------->MYB46(3)     --------->ANAC58                 --------->ARR14(2)                          --------->REM1(1)     --------->ANAC58                 <---------ARR14(2) --------->At4g35610      --------->MYB46(3)     --------->DEAR3(1)        --------->ANAC46 ------>NtERF2                ------->GAMYB     --------->ANAC46         <---------At5g28300--------->ANAC58         ----------->RAV1(1)    <---------LBD16       <---------ARR14(2)--------->RRTF1(3)          --------->At4g35610     <---- ------->DOF2------>MYB83 --------->ARR14(2)--------->ANAC58--------->At4g35610 ----------->RAV1(1) -ZmHOX2a(1)--------->ABI4(1)--------->MYB52(1)<---------ALFIN1        --------->ANAC46  <---------DAG2   gaaagctccgccacctccccctttggcgaattcacggccaattccgccgccacgtcagcatcagcatcaacatcagcaacagcaacaacaacctttctac  19488800                                                                           -------->P                                                                         --------->AtMYB61                                                                         ------->GAMYB                                                                        <---------MYB55(2)                                                                        <---------MYB52(2)                                                                        --------->MYB46(3)                                                                     --------->MYB46(3)                                      <----------DOF2        --------->TOE2(3)                            <---------LBD16                  --------->AtMYB61                           <---------AtLEC2                  ------->GAMYB ------>MYB46(1)                        --------->KAN4(2)                   --------->MYB46(3)                       --------->KAN4(1)                 --------->MYB46(3)------>MYB83                       <----------TaMYB80              --------->ANAC46--------->ANAC58                       <---------KAN4(1)               <---------ALFIN1--------->ANAC46                      --------->GLK1(2)       <---------ARR14(2)   --------->AtMYB61                      --------->ARR14(2)      <---------ARR11(3)   --------->TOE2(3)            -----                      <---------KAN4(2)       --------->ARR14(2)   ------->GAMYB <---------ANAC58----                      <---------ARR14(2)      <---------GLK1(2)--------->MYB46(3)<---------ANAC58<---         ----------------->AG--------->HSFB2a(2)     ------>ZmHOX2a(1) --------->ANAC58     ------>ZmHOX2a(1) -----YAB1            ---------->TaMYB80      --------->ARR11(3)  --------->MYB46(3)     ------>NtERF2   gattacttcttccctaatgttgagaatatgcctggaactactttagaagatactcctccacaaccacaaccacaaccaacaaggcctgtgcctcctcaac  19488900                                                                                   --------->ANAC58                                                                              <---------------AtSPL3                                                                              <---------WOX13(1)                                                                            <---------MYB46(3)                                                                        <---------DEAR3(1)                                                  <------ZmHOX2a(1)  <---------ARR14(2)                           XXXXXXXXXXXXXXXXXXXX>MIR854A-E            ----------->HVH21                      ----------->TGA1         <------ZmHOX2a(1)    <------ZmHOX2a(1)            <---------MYB52(1)           <------ZmHOX2a(1)    <------ZmHOX2a(1)    --------->ANAC58 ---->MYB46(3)      <------ZmHOX2a(1) <------ZmHOX2a(1)    <------ZmHOX2a(1)--------->ATHB12    ----- --->GAMYB<---------MYB46(3)        --------->ALFIN1     --------->ALFIN1  <---------YAB1--------->MYB46(3) ------ALFIN1     <---------TOE2(3)<------ZmHOX2a(1)    <------ZmHOX2a(1) --------->At5g28300<-------   cacattcaccagtcgttactgaggatgacgaagatgaggaggaggaagaggaggaagaggaggaggaagaggagacggtgattgaacggaaaccactggt  19489000                                                                                              -------                                                                                             --------                                                                                            ---------                                                                                            <--------                                                   <---------------AGL15                 --------->GLK1(1)                              --------->ATHB12     --------------->AGL15                 <---------GLK1(1)                             <---------YAB1     <-----------GT1                         <---------GLK1(1)  ---------->DOF2         ----------->TGA1   ----------->GT1                            --------->ARR14(2) <------ZmHOX2a(1)        ----------->HVH21 --------->DAG2                              <---------ARR14(2) ---->ALFIN1          <------ZmHOX2a(1)    ---------->DOF2                        <---------ARR14(2) ----RAV1(1)    <---------ZAT14       ----------->GT1                       ---------->DOF2 <--------   ggaggaaagaccgaagagagtagaggaagtgacgattgaattggaaaaagttactaatttgagagggatgaagaagagtaaagggatagggattcccgga  19489100                               --------->ANAC58                               --------->ANAC58                                      ---------->DOF2                      ----------->HVH21                                            <---------HSFB2a(2)                      --------->WRKY38(1)                                  ---------->DOF2                     <---------MYB52(1)                                <---------ANAC58                     <-----------HVH21                                 <---------ANAC58                    <---------At4g35610                                <---------ANAC46        ------  <------ZmHOX2a(1) --------->LBD16                                  --------->ARR11(3)   <---------ZAT18 -->LBD16          <---------DEAR3(1)                            <---------YAB1    --------->HSFB2a(2) ->LBD16           <---------DREB2C(2)                         --------->YAB1 <---------HSFC1(2) >HSFB2a(2)        <---------ANAC46                           <---------YAB1  --------->HSFC1(2)  <-- -HSFB2a(2)       <---------LBD16                  <------------CBF  <---------AHL20(2)   --------->ZAT18 -LBD16<------ZmHOX2a(1)    ----------->HVH21     --------->ATHB12<---------ICU4 --------->At4g35610   gagaggagaggaatgcgaatgccggtgactgcgacgcatttggcgaatgtattcattgagcttgatgataatttcttgaaagcttctgaaagtgctcatg  19489200                                                                   <---------YAB1                                                                --------->ICU4           <---------ANAC58                                ----------->GT1                          <           <---------ANAC58                          --------->MYB52(1)                           ---           <---------ANAC46                       --------->At4g35610                             --- --->ICU4<---------YAB1      *TSS <---------YAB1  <---------At4g35610                            <--- -------YAB1     <---------At4g35610    <---------YAB1  ------->GAMYB                            ----   atgtttctaagatgcttgaagctactaggctccattaccattctaattttgcagataaccgaggtaattttgattcgataaatgtctgagagaaacaaaa  19489300        <---------At4g35610        --------->At4g35610  <------MYB46(1)  <------MYB83          <---------MYB46(3)                                 <---------AHL20(2) ---------WOX13(1)   --------->ALFIN1                              <---------ANAC58               <-- ------>ATHB12       <-----------RAV1(1)                           <---------ANAC55(1)  <------ZmHOX2a(2) ----->HAHB4   <---------WOX13(1)     <------ZmHOX2a(1)            <---------ANAC55(2)  ============= ------YAB1 <---------YAB1       <-----------GT1                   <---------ANAC58    <---------ARR11(3) ----->ICU4 <---------TOE2(3) <---------REM1(1)                    <---------ANAC46    --------->ARR11(3)   tgattggtttagctaagattgatgtgttgttgttgtaacaggacatattgatcactctgctagagtgatgcgtgtaattacatggaatagatcatttaga  19489400              --------->ICU4              <---------YAB1            <---------At4g35610      ------>MYB83      ------>MYB46(1)  --------->ICU4                                                    ---------->DOF2 ----ZmHOX2a(1)--------->ATHB12  --------->ATHB12                             <---------ANAC58 ====HOX2a_HOX2a     ---------->DOF2              ------->TEIL                <---------ANAC58   ggaataccaaatgctgatgatgggaaagatgatgttgatttggaagagaatgaaactcatgctactgttcttgacaaattgctagcatgggaaaagaagc  19489500                                                                                                 <---                                                                                 <----------DOF2 <---                                                                                 --------------->AGL15                                                                                 <---------DAG2------                                                                                 <---------------AGL15             ----------->GT1                                                    <-----------------AGL3            <---------TOE2(3)                 <---------ANAC58                <-----------GT1 <------            <---------TOE1(3)                 <---------ANAC58   <---------At4g35610     <------ZmHOX2a(1)          <<<<<<<<<WRKY18                   <---------YAB1       --------->At4g35610   <---------TOE2(3)         --------->WRKY18(1)         <----------DOF2       <---------ANAC46  <-----------GT1  ------- ----------->TGA1                ---------->ID1     <---------ANAC58     <---------ARR11(3)   <------ ----------->HVH21               <---------CCA1(2)  <---------ANAC58     --------->ARR11(3) ---------   tctatgacgaagtcaaggtaactatatcaaaacttgtctcttttttatgcttgtgcttgtttagtgaagctgaaagattttaactttttgaggaaagatt  19489600                                                     --------->ATHB12 ------ANAC58                                     <----------DOF2 ------ANAC58                               --------->ANAC58                           --------->ARR11(3) --->GLK1(2)                                --------->ANAC58     <--------P            --------->AHL20(1) ---GLK1(2)                               ---------->DOF2    <---------ANAC46          <---------AHL20(1) -->ARR11(3)                         --------->LBD16<---------YAB1                     <---------ARR11(3) ---ARR11(3)                         ------>ZmHOX2a(1) <---------WOX13(1)        --------->YAB1 -->ARR10       <----------DOF2    ----------->RAV1(2)>>>>>>>>>ARR2             --------->ICU4   cttgcaaccatgtttagtctttttgggtaatcttctctcctgagaaaagcccctttgattgttttgggtagttttatgagcaaaaatgatatatttttct  19489700  Previous    Next  AGI:  At1g52320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45918.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867) Range:  from: 19489229    to: 19491148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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