Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------>ZmHOX2a(2)                                                                      --------->At4g35610                                                                      <---------At4g35610                                                    <---------YAB1   <---------ARR14(2)         ------->TEIL                       --------->TOE1(3)        <---------AGP1         --------->ARR14(2)                 --------->TOE2(3)        ------->TEIL         <---------ARR14(2)              ------>MYB46(1)             <---------ARR11(3)         --------->GLK1(2)               ------>MYB83                --------->ARR14(2)    --------->MYB52(1)                 --------->AtMYB61             --------->ARR11(3)    <-----------GT1                    <---------MYB59         --------->ATHB12           <---------- >ARR11(3)    --------->AtLEC2        --------->MYB46(3)     --------->GLK1(2)            --------->MYB52(1)   gagaaataacgaatccatacaaagacttattcaatccctaaccaaaccctaattctgatagagaatcaatggatctgcaatactaaaacatataacgaat  19479500                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                              <------NtERF2                                                                                              <------                                                                                            <--------                                                                                           --------->At4g35610                             ---------->DOF2                                               <---------At4g35610                            <---------ATHB12      ---------->DOF2      <-------TEIL------>ZmHOX2a(1)                    <---------RAP2.6(2)   --------->ANAC58             --------------->AtSPL8<-------                   --------->RAP2.6(3)    --------->ANAC58             --------------->AtSPL3<-------              ------>ZmHOX2a(2)        --------->ANAC46               --------->GLK1(2)    --------->SPL7            --------->ARR11(3)      <---------ARR14(2)               <---------GLK1(2)  <---------ANAC58 -GT1       <---------ARR11(3)      --------->ARR14(2)             ----------->ARR10    <---------ANAC58   tgaaacgaagaaatgatctatttcggctaaatcaagcgaatacgaagcaaatgaaagagagagagagaagagattcgtacaagtcctcttgcgagcggcg  19479600                                                       ----------->HVH21                                                     ----------->RAV1(2)                                                     <---------At4g35610                                                     --------->At4g35610                                                   <---------ALFIN1                                                   --------->O2        --------->ANAC58                         ================RAV        --------->ANAC58                       <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->ANAC58                           --------->DEAR3(1)                                ------  --------->ANAC58                           <---------DEAR3(1)                                <----- ---NtERF2                                  --------->ATERF1(1)                                <----- ---->LBD16                                <---------ATERF1(1)                                 ------ ->NtERF2                  <---------------AGL15 ----------->RAV1(1)                          ------- ----ANAC46                <---------HSFB2a(2)------>NtERF2                                   <------ ---LBD16                  --------->HSFB2a(2)<---------ATERF1(1)                           --------- -DEAR3(1)                <-----------------AGL1 <---------ALFIN1    ----------->HVH21     --------->HSFB2a(2) --RAP2.3(1)              <---------LBD16 ----------->HVH21        --------->ALFIN1        --------->ANAC46 --DEAR4(2)       --------->MYB46(3)   --------->TOE1(2)         --------->ALFIN1      <----------DOF2   ggataagcacaagcagagcaacgactcttctggatgtggaaactgcgacggccacatctgacacagagtgtgtgactcttgtttcttctctttccgaaac  19479700   <---------MYB52(1)                         --------->CCA1(2) --->HSFB2a(1)                                <---------GLK1(1) ----HSFB2a(1)                                --------->GLK1(1) ----HSFC1(2)                     ----------->GT1 --->HSFC1(2)                     <----------ID1                                                   <- -->ARR14(2)       --------->GLK1(2)         <---------ARR11(3)                                    == -----ARR10       <---------GLK1(2)   ---------->DOF2             --------->ANAC46          --------- >LBD16 <---------MYB52(1)    ---------->DOF2--------->ARR11(3) --------->MYB52(1)     ---------->DOF2   ttcccgttcccttagtctgagaatctcaaaaacaaagcgataaaacagatatcagagtaatgaaatcaacgaagcatagagatgaaatagaaagatagag  19479800                                                                                              <------MYB46(1)                                                                                              -------                                                                                              <------MYB83                                                                                             --------                                                                    <----------DOF2          --------                          <---------ARR14(2)                     --------->LBD16            <--------P                          --------->ARR14(2)                <---------GLK1(1)               <--------              <---------YAB1                <---------ARR11(3)   ------>NtERF2             <---------MYB52(1)           <------ZmHOX2a(2)                --------->ARR14(2)  <---------RAP2.6(2)       <---------DEAR3(2)          --------->ARR11(3)            <---------LBD16  <---------TOE1(3)            <---------O2   --------->GLK1(2)  <---------At4g35610 --------->LBD16<---------TOE2(3)            --------->bZIP60(1) -----ZmHOX2a(1)   ---------->DOF2    <-----------GT1--------->TOE1(3)                <---------bZIP60(1) =================HOX2a_HOX2a<---------ANAC58        --------->TOE2(3)             ----------->TGA1 >CCA1(2) <---------ARR11(3) <---------ANAC58--------->CCA1(2) <---------LBD16     ----------->HVH21   aggagaatcgtagatcaccattgaagcggatgcgagttttttcccagatataaaaccttaaggtttccggcttcaagagaaggaagtgacgacggtaggt  19479900                                        <---------TOE2(3)                                        <---------TOE1(3)                                  <---------YAB1                                  --------->AHL20(2)   *TSS <-----------TBP           <---------AHL20(2)  ---------->DOF2              ------>ZmHOX2a(1) ---->GT1                      <----------DOF2          <------------CBF ->MYB46(2)  ---------->DOF2---------->ID1           <----------DOF2 <-----------HVH21 ->MYB59--------->AHL20(2)<---------ANAC58  ----------->GT1    ------>ZmHOX2a(2)           <---------ANAC55(2) -MYB55(1)----------->TBP <---------ANAC58<-------GAMYB--------->ATHB12                    --------->ANAC55(2)   taacaaaagtttatataaagctagggtttcgtcctttttattagggttgtgaattctttattggatcgataagtcaggcccatgggccttaatacttaat  19480000                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  <--           --------->LBD16                                   <---------YAB1                       ---          <---------ANAC58                             <---------DAG2                 <---------GLK1(2)          <---------ANAC58            --------->ARR14(2)   <-----------GT1      <---------YAB1    <--         <---------LBD16             <------ZmHOX2a(1) <----------DOF2   <---------ANAC46       -----  <----------DOF2                 <---------LBD16   <-----------GT1     <---------LBD16   -----------   aagcctttttgtgcgggactcatttcgaagacttaaccaggaaacgatttgtttttactttttaccattgttgtgccggtttacaatagaatttgtaaca  19480100                                --------->AHL20(1)                                <---------AHL20(1)    <---------TOE2(3)           --------->AHL20(2) ------->AHL20(2)               <---------AHL20(2) --------AHL20(2)         <----------DOF2 ------->ATHB51        <-----------GT1 --------ICU4       <---------AHL20(2) -------ATHB1  <---------AHL20(1)                                              --------->AHL20(2) -------ATHB12 <---------AHL20(2)              <-----------GT1          --------->AHL20(2) ------>ICU4   --------->AHL20(1)     <-----------RAV1(1)              --------->AHL20(2) -------ATHB51--------->YAB1   --------->AHL20(2)               --------->AHL20(2) ---->YAB1   <---------YAB1    <---------AHL20(2) <----------DOF2--------->AHL20(2) >GT1     --------->ICU4  <---------DAG2      <-----------GT1 --------->YAB1  --------->AHL20(2) ----   ataatttaggtgagtattatattttatactttattaaattgtgttgttttaacttttaaaccaaaaataaaaaataaaaaataaaaaaactaattgcaat  19480200                                      <---------ATHB12                                --------->ARR14(2)                                                <--                               <---------MYB52(1)                                           ---------                           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           <--------          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             <--------    --------->AHL20(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <--------    <---------AHL20(1)   <---------ZAT14                           --------->AHL20(2)       ---------    <---------AHL20(2)   --------->ZAT14       <xxxxxxxxxxxxxxxsmallRNA(si3)             --------->AHL20(2)   --------->AHL20(2)  --------->ANAC46     <---------TOE2(3)      <---------AHL20(2)  --------->AHL20(2)   --------->YAB1   --------->ZAT18   <---------YAB1        ------>ZmHOX2a(1)--------->YAB1--------->AHL20(2) ----->YAB1         <---------ZAT18 ------>ZmHOX2a(1)      --------->TOE2(3) ----------->GT1---------   aacaattatattgagaaaattttgcactaaaccgtttcctatcatttatgtaaacaacattcctcagattaaaatcggatgataaaaaaaaaaatatatt  19480300                                              --------->AHL20(2)                 <------MYB83                                             <---------WOX13(1)                  <---------MYB46(3) -------TOE2(3)                            --------->ATHB12                      <------MYB46(1) >AHL20(2)                                <---------AHL20(2)     --------->AHL20(2)            ------ -AHL20(1)                                --------->ICU4         <---------AHL20(2)            ------ -AHL20(2)                                --------->AHL20(2)     --------->AHL20(1)        ------>ZmHOX2a(1) -ARR11(3)                        ------->GAMYB         --------->HSFB2a(2)  <-----------RAV1(1)    - >AHL20(1)                      --------->At4g35610    <---------LBD16      <---------TOE2(3)  ------ >ARR11(3)                  <-----------GT1<---------AHL20(2)    <---------AHL20(1)    <-----------GT1   aagaaaatttgtgatttgagtctcaaattttcacaactgaagtattaattgaatacttggggaacaatttattccataaatgttggttttttcctccaag  19480400  Previous    Next  AGI:  At1g52300.1    Description:  60S ribosomal protein L37 (RPL37B). Identical to 60S ribosomal protein L37-2 (RPL37B) [Arabidopsis Thaliana] (GB:Q43292;GB:Q9C822); similar to 60S ribosomal protein L37 (RPL37C) [Arabidopsis thaliana] (TAIR:AT3G16080.1); similar to unknown [Populus trichocarpa] (GB:ABK95278.1); similar to unknown [Populus trichocarpa] (GB:ABK93758.1); contains InterPro domain Ribosomal protein L37e; (InterPro:IPR001569); contains InterPro domain Ribosomal protein L37ae/L37e, core; (InterPro:IPR011331); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 19478567    to: 19479903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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