Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->AHL20(2)                                           --------->AHL20(2)                                          <---------YAB1                                         --------->TOE2(3)                                        <--                                        <--------HAHB4                                      <--------                                        --------->YAB1                                   ------->TEIL                                        --------->ATHB12                             --------->DAG2                                        <---------ICU4                         <---------------AGL15             --------->At4g35610       <---------YAB1                         =======================           --------->YAB1              --------->ICU4                         ----------------->AGL3-  --------->ATHB12                     <---------ATHB12                      --------->TOE2(3)    ---  <---------ICU4                     --------->YAB1                          --------->TOE1(3)    --- <---------YAB1             <------ZmHOX2a(1)   ---------->DOF2      ---------->DOF2---------->DOF2<-   aagattattgctatcatctacaaaaacagaggaattgaataatcattaaaaaaagattgagtctttggaaataaagaaaccctaaataaagtacctttgg  19475700                               --------->ARR11(3)                               --------->ARR14(2)                               <---------ARR11(3)                              <---------GLK1(1) -------ARR14(2)              <---------CCA1(2) --DOF2     --------------->AGL15 ===========================MADS_MADS<----------DOF2                      --------->HSFB2a(2) ----->ZmHOX2a(2)      <---------HSFB2a(1)                                <---------HSFB2a(2) ------>ARR11(3)       --------->HSFB2a(1)        <----------DOF2    <----------DOF2       <-------TEIL ------>ARR14(2)       --------->HSFC1(2)    <<<<<<<<<TBF1       <----------DOF2          --------->CCA1(2) -----ZmHOX2a(2)       <---------HSFC1(2) <<<<<<<<<TBF1     ------>ZmHOX2a(1)        ---------->DOF2-   gatctagtgagtctctgttaatagaagcttcgatatcttctttcttcttcttctttaacttcctcttctttcttttatagaaacagacaaagatacaaac  19475800                                                                                                 ----                     <---------HSFB2a(2)                                                        <----                     --------->LBD16                                                          -------                --------->ZAT2                                                               --------                --------->At4g35610                                                          --------                <---------ZAT2                                                               <-------                <---------At4g35610    <---------ICU4                                       <--------          --------->MYB52(1)          --------->ICU4                              <-------GAMYB -----      <------ZmHOX2a(1)             --------->YAB1            --------->HSFB2a(2)<---------MYB46(3)     <----------ID1  --------->HSFB2a(2)                      <---------HSFB2a(2)<-----------RAV1(1) -------->LBD16------->TEIL      ----------->GT1        --------->REM1(1)        --------->MYB52(2)   tccgagtaggacaaacgtagctccgagaactactccagtaataagtccagttaatgctacatttctcgagcctccatcaatgtttgttgttgtctccgga  19475900                                                                                                <----                                                                                            ---------                                                           --------->ARR14(2)            --------->DEAR3(1)                                                        <---------ANAC58                 --------->ATERF1(2)                                                       <------NtERF2                     <---------DEAR3(1)                                                      ------>NtERF2                      <---------ATERF1(2)                                                     --------->DEAR3(1)                 <------NtERF2                                                     <---------DEAR3(1)                 --------->ATERF1(1)                                                  --------->TGA1a                      <---------ATERF1(1)                                                  <---------O2                         <---------RAP2.3(1)                                                  --------->bZIP60(1)                  <---------ERF1                                                  <---------ANAC58                     <---------RRTF1(1)                                                  <---------bZIP60(1)                  ------>NtERF2                                                  <---------bZIP60(2)                  <---------RAP2.6(1)                                                  <---------ANAC46                    <---------DEAR3(1)                                                  <---------ANAC58                    --------->DEAR3(1)                                                  --------->O2                       --------->ATERF1(1)                                                  --------->TGA2(1)                  --------->ERF1                                                  <---------TGA2(1)                  --------->RAP2.3(1)      --------->MYB52(1)        <---------ANAC46  <---------TGA1a   <---------ANAC46 --------->RRTF1(1)    --------->MYB46(3)    <---------MYB46(3)     ----------->STF1  --------->ALFIN1  --------->RAP2.6(1)    --------->DEAR3(2)<---------ATHB12          <---------TGA2(2)  <---------AtMYB61------>NtERF2    --------->ATERF1(1)  <---------WOX13(1)    ----------->HVH21 <---------ANAC58   <---------RAP2.3(1)   ------>NtERF2    <---------At4g35610        ----------->TGA1  <---------ANAC46   --------->LBD16 ----->MYB52(1)    <---------TOE2(1)         --------->At4g35610 <---------ANAC58   <---------ATERF1(1) -----ARR14(2)     <---------TOE1(1)      <---------ZAT2<---------ANAC58           <---------DEAR3(1) -->LBD16       <---------ARR14(2)        --------->At4g35610 <-----------RAV1(1) <---------LBD16 ->HSFB2a(2)    --------->ARR14(2)        <---------At4g35610<---------ANAC46  --------->HSFB2a(1) ->ANAC46      <---------HSFB2a(1)        --------->ZAT2<---------ANAC46       <---------HSFC1(2) --HSFB2a(2)   <---------HSFC1(2)        <---------ARR14(2)<-----------HVH21   --------->HSFC1(2) -LBD16        --------->HSFC1(2)        --------->ARR14(2)<---------ARR14(2)  <---------HSFB2a(1) ---->ARR14(2) --------->HSFB2a(1) ----------->HVH21--------->ATERF1(1)    ----------->GT1<---------DEAR3(2)   aacggagccaacgaagaaggtccgatgatggatggctgagacggagctggtgacgtcgccgtgtctggtgtggtggaaggaaactccggcgccggtggag  19476000                                <------ZmHOX2a(2)                        <---------ZAT14                                ======================HOX2a_HOX2a <---------ANAC58                      <---------ETT(2)                 <------MYB83 --------->ALFIN1                      --------->ETT(2)                 <------MYB46(1) --------->ZAT18      <------NtERF2                    <-------GAMYB                 --------->ATHB12<---------TGA1a         <---------ANAC46                   <---------DEAR3(2)            <---------YAB1   <---------ANAC46        <---------ANAC58 -----At4g35610   --------->ETT(1)             <------ZmHOX2a(1)  <---------ANAC58        <---------ANAC58 >ALFIN1          <---------At1g77200        <---------TOE2(3)<-----------RAV1(2)        <---------LBD16   atgagagggaagggatagtgtcggtagacattagatcagaagatgatgaggatgatttggtttttcaggcgtgtgtgcaggtttttctcatggcggaagt  19476100                                                                        --------->O2                                                                        =============================                                                                        <---------O2                                                                      <---------ALFIN1                                                                    --------->SPL7                                                                  <-----------HVH21                                                             <---------PCF2                                                             <-----------HVH21                                                             --------->TCP15(1)                                                             --------->TCP20                                                            <------MYB46(1)                                                            <---------DEAR3(2)                                                            <------MYB83--------->TGA1a                                                            <---------TCP15(2)                                                           --------->ABI4(2)                                                           --------->MYB55(2)                                                          --------->ALFIN1                                                          <---------MYB55(1)                                                        <---------ANAC46<---------TGA1a                    <----------ID1              <----------ID1--------->PCF2                  *TSS            <------ZmHOX2a(1)    <---------DEAR3(1)                  <---------HSFB2a(2)             ------------------------>ANAC81======================================bZIP_DOF --------->HSFB2a(2)             <---------------------WRI1     ---------->DOF2<---------MYB46(3)        ---------->ID1   gaagacgaagacgaagacgaagaagacgaagacgaaggagaatgaagaaagggacatgcggtgggtcccgtcccacttgagagatttgttcttctggcaa  19476200                                                        --------->YAB1                                                        ------->GAMYB                                                       <---------MYB55(2)                <-----------TGA1                       --------->MYB46(3)                <-----------HVH21                     -------->P               --------->O2                           ------>MYB83               --------->TGA1a                        ------>MYB46(1)               --------->bZIP60(1)                  <---------MYB46(2)               ============================================MYC_MYB               --------->ANAC46                     --------->MYB46(3)               =================================MYC_MYB<---------ATHB12               <---------TGA1a                      <---------MYB111(2)               <---------O2                       -------->P               ============================================MYC_MYB      <---------AHL20(2)                     --------->ZAT6      --------->AHL20(2)                --------->At4g35610    =====================bZIP_DOF       <---------At4g35610  ---------->DOF2           <-------TEIL    <----------DOF2                     <-------GAMYB--------->MYB55(1)        <----------ID1 <------ ==============bZIP_DOF          <---------MYB52(1) <---------MYB111(1)    ---------->DOF2    <------   gtgtctctttaattctctcgtcactctgtttctcagttagtcagttaacacttaccaaccatcaaaagaagaactaataaagagccaaattcatcttatg  19476300                  --------->ATHB12                  --------->YAB1                  <--------HAHB4                  <---------ICU4                         --------->ATHB12                 <---------ATHB12                       --------->ICU4                 <---------YAB1                         <---------YAB1                 --------->ICU4                         <---------ATHB12               --------->YAB1                     <-----------GT1                                  <-              <---------AHL20(2)                 --------->AHL20(2)                            <xxxxx             --------->AHL20(2)              <---------AHL20(2)                                <xxxxx          --------->AHL20(2)                <---------AHL20(2)                        <--------------      --------->AHL20(2)                    --------->AHL20(2)     --------->GLK1(2)  ---------------      <---------AHL20(2)                    <---------AHL20(1)    <---------GLK1(2)  ----------------  <---------AHL20(2)                     --------->YAB1<---------TOE2(3)            <---------At5g28300 <---------AHL20(2)                    --------->AHL20(2)<---------ICU4            <-----------GT1 <- ---TOE1(2)  --------->AHL20(1)       --------->YAB1  <---------ICU4      <---------TOE2(3)    <----- ---TOE2(2)  <---------AHL20(1)     --------->AHL20(2)--------->YAB1  <----------DOF2----------------   ttttttatttaaaaatataatcattaagtcaacatttttaaaataataaaatttactaatgatttttagaatctttaagaaaaatttaccatataagtca  19476400      <---------ANAC58    <-----------GT1 ---------DOF2 xxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxsmallRNA(s) -AGL15                                                           <---------AtLEC2 >AGL15<---------DAG2                  <---------YAB1          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ->AG <---------ANAC58                --------->AHL20(2)  <---------YAB1 --------DAG2            --------->AHL20(2)       --------->AHL20(2) ----WRKY12              <---------AHL20(2)       <---------AHL20(2) ->AGL1<----------DOF2  --------->AHL20(2)  --------->ANAC46--------->ARR11(3)   acttttttgctttttttttttaaaaaaaaaattttaaaatttttatacacaattttttatatgattttggatgactcgatacaatatgtcaaattagaac  19476500                                                                        <---------AHL20(2)             <---------ZAT14                                            --------->AHL20(1)       --------->ANAC46                                                 --------->AHL20(2)      <---------LBD16                   <---------------AGL15          --------->AHL20(2)     <-----------GT1                    --------------->AGL15  --------->ANAC58        --------->ICU4  <---------AHL20(2)        <-----------GT1                    --------->ANAC58   ----------->GT1   ttattttatacggactaaactagcctatattttcaagtttgactaattttagagaaaaactagtccagccaaaaaaaattagtctagtaaatattcaatt  19476600  Previous    Next  AGI:  At1g52290.1    Description:  protein kinase family protein. similar to ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1), ATP binding / protein kinase [Arabidopsis thaliana] (TAIR:AT3G24550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65522.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 19473702    to: 19476118    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version