Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------TOE1(2)            --------->YAB1           <---------ATHB12    --------->At4g35610 -------->GLK1(2) -----------ARR10 -------->ARR14(2)        <---------ICU4                                                         <--- ---------ARR11(3)       --------->ICU4                 --------->YAB1 --------->YAB1     <------ZmHOX2a(1) ---------ARR14(2)       <---------YAB1               ------>MYB46(1) <---------ATHB12  --------->ANAC58 -------->ARR11(3)    <-----------GT1                 ------>MYB83  --------->WOX13(1)  --------->ANAC58 ------->RVE1(1)  <----------DOF2            <-----------GT1 ------------------------>ANAC81  <------   aaaatctgctccaatcgtagctttatactgattactaaactttcgattcacaaacctatcaaaatagaatcaatcaaaatcaaatttcataaggaattta  19472900                               <---------GLK1(1)                               --------->GLK1(1)                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                         --------->CCA1(2)                        --------->ARR11(3)                        <---------ARR11(3)                            <---------ALFIN1         <-----                        --------->ARR14(2)                            --------->ZAT6           ------                        --------->AGP1                              ----------->RAV1(1)        <-----                        <---------ARR14(2)                          <<<<<<<<<<<<<<<<<LFY      <------ ------YAB1             <---------AGP1           <-------TEIL      --------->ANAC46 ---------->DOF2 ---AHL20(2)          ----------->ARR10      <---------YAB1       <-----------------AGL1   --------->YAB1   tcaatgttctaagtaagagacacatagatctggatttcagaaacatactgattcatcaacgaagtcttcccaacactggccataaaaaaagaatcaaaat  19473000         <---------ATHB12                                      --------->ANAC58   --------->WOX13(1)                                          --------->ANAC46  <---------ICU4                                               --------->ANAC58 <---------ATHB12                                             --------->MYB46(3) <---------YAB1                                --------->CCA1(2)   <-----------HVH21                < ----ARR11(3)                        <---------GLK1(1)        <---------LBD16        --------->TOE1(3) --->ARR11(3)                  <---------ARR14(2)           -------->P               --------->TOE2(3) ------ARR10                   --------->ARR14(2)          <-----------GT1     --------->YAB1 <------ ---GLK1(2)         <-----------GT1  --------->GLK1(1)  <-----------ARR10     <---------YAB1  -------   ctcatcattcaatgaacaaataaaaccacatcaaatctgaaatctgaagagatgagagaatttacccgctatcaccgagaatgataaccttgagaagaac  19473100           --------->ARR11(3)  --------->LBD16                                     <----------DOF2  ------>NtERF2                                    <-----------GT1   <------------AtMYB77 <---------DEAR3(1)      <----------DOF2      <------MYB83         --------->GLK1(2) ---------LBD16  <---------LBD16              <------MYB46(1)   ----------->ARR10 ---ARR11(3)    --------->MYB52(1)    <---------At4g35610   <---------At4g35610          --------->YAB1 -->ARR11(3)   --------->WRKY12       --------->At4g35610   --------->At4g35610       <----------DOF2   tctccggcgagaagacattgacggaaacttttagggatttagctgatttggtttttcttttcagcgaagaaactgtctctgttttcttctttcacaatct  19473200                                                                       <-----------GT1         <-----                   <---------ANAC46                                 ----------->GT1   <----------DOF2                   <---------ANAC58        <-----------GT1        ---------->DOF2  --------->ARR11(3)               <<<<<<<<<TBF1         ----------->GT1           ------->GAMYB       <---------ARR11(3)            <<<<<<<<<TBF1           --------->DAG2     *TSS --------->MYB52(1)<---------AHL20(2)    <  <----------DOF2  <---------ANAC58---------->DOF2   --------->At4g35610 <---------YAB1 <---------AHL20(2)   ctctcttttggttcttcttcttcgtgtgatttacagaaaaagtatatactgtattagctaaataacagcaaagttactattttaaaatcttttattttcc  19473300                                                                 --------->YAB1                                                             <---------AHL20(1)                                                             --------->AHL20(1)                                                             <---------AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(1)              <---------AHL20(2)                 --------->AHL20(2)            <----------DOF2                      <---------AHL20(2)            --------------->AGL15          ------------>CBF  --------->AHL20(2)            <---------------AGL15         <-----------GT1--------->AHL20(2)   <---------ARR11(3)        <---------ALFIN1              --------->YAB1    --------->AHL20(2)    --------->ARR11(3)  <-- <------------CBF                    <---------YAB1  <---------AHL20(2)      <---------GLK1(1)  ----- ------------AGL1                --------->YAB1 --------->AHL20(2) <---------YAB1               <---- ---------ICU4--------->AHL20(2) --------->TOE2(3)   --------->AHL20(2)      --------->GLK1(1) ------   caaaattgcccctcctttaattagtcattaactaatcttattataaacaatttaaaaaattaattaattatacttgaagaaatcttcaaacggtctaatt  19473400                                                            <-----------GT1                                                         -------->HAHB4                                                         <--------HAHB4                                                         --------->ATHB51                                                         --------->YAB1                                                         <---------ICU4                                                         <--------ATHB1                                                        <---------ATHB12     <----------DOF2                                    --------->AHL20(2)     <---------DAG2                                     --------->ICU4                             <-  <-----------GT1                                       <---------ATHB51                           -- -------YAB1                    --------->WRKY12        <---------YAB1            --------->MYB46(3) ---->YAB1                  <---------YAB1            --------->YAB1    ------->GAMYB           ----- -----ICU4                <-----------GT1          --------->YAB1      --------->MYB46(3)       <---- --->ICU4          ----------->GT1               --------->ZAT14  ------>ZmHOX2a(1)            ------   atgtttactttatcaaatgttttgttaattaccattgacttatgtactaactatactaataattactccttcaaccaaaaatcaaacaccatgcttataa  19473500                                           <---------GLK1(1)  <---------AHL20(2)              <---------AHL20(2)  <---------YAB1                --------->AHL20(2)                               <---------ANAC58 --------AHL20(1)              --------->AHL20(1)                                <---------AtLEC2 ------->AHL20(1)              <---------AHL20(1)                                <---------ANAC58 ---->AHL20(2)          ----------->GT1    --------->GLK1(1)                     <---------ANAC46 -----AHL20(2)       ------------>MYB.PH3(1)                              ---------->DOF2 --->YAB1     ------->TEIL<---------MYB52(1)                        <---------ARR11(3)      ---------   aaatattatttctctgaatctaaaatcggttaatatatatatgggatttcatttgcaaaaaaaaaaacaatttcttcaaagttgcatggataacaaaaga  19473600                                                                                  --------->YAB1                                                                       <---------ATHB51                                                                       <---------AHL20(2)                                                      --------->AHL20(1)       --------->YAB1                          ----------->GT1             <---------AHL20(2)     <---------TOE2(3)  <----                         ----------->GT1    --------->ANAC58           --------->AHL20(2)     -------                        <---------ARR11(3)  --------->ANAC58           --------->ICU4        <-------                        --------->ARR11(3)  --------->ANAC46       --------->AHL20(2)      <---------     <----------DOF2---------->DOF2<-----------GT1    <---------AHL20(1)<---------ICU4--------->DAG2 ->DOF2     ---------->DOF2     --------->YAB1     --------->AHL20(2)--------->YAB1  ---------->DOF2-   aaacatgctttaaaaaaagaatcaaagatgttaaaaataactttccactcaaataatatatcacggccaaaaaataattaagaatcataaagtctttgat  19473700                        ------>MYB46(1)                  <-------PIF5                        ------>MYB83                     ------->MYC2                      <---------MYB46(2)                 <-------MYC2                      <---------MYB111(2)                <-------MYC4                      --------->AtMYB61                  ------->PIF5                     --------->ANAC58                    ------->MYC4                     --------->ANAC58                    ------->MYC3                     --------->ANAC46                    <-------MYC3            --------->ARR14(2)                           <-------PIF4            <---------ARR11(3)                           ------->PIF4            <-----------ARR10                           <---------ANAC58           --------->RVE1(1)                    --------->AHL20(2)        <---------AHL20(2)                      --------->YAB1       --------->AHL20(1)                  --------->MYB46(3)       --------->AHL20(2)                ----------->RAV1(1) -----WOX13(1)     --------->ANAC46<---------ARR11(3)   <---------ANAC46                            - -->ATHB12 --------->CCA1(1)       --------->ARR11(3)   <---------TGA1a                           <-- --YAB1<---------AHL20(2)         --------->RVE1(1)     <---------ANAC58  ----------->HVH21       --- -DOF2 <---------AHL20(1)         --------->CCA1(1)     --------->TGA1a   <---------YAB1       <----- ------>TEIL--------->ARR11(3)  --------->AHL20(2) <---------ICU4      <-------TEIL          --------   tgaatctaatttaatatcttcacaccaaactcaaaaaaatctccaacaaataatattcacgtgcaatatcaggctcatgacagtttcgattagagccaca  19473800  Previous    Next  AGI:  At1g52280.1    Description:  AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding. similar to AtRABG3c/AtRab7D (Arabidopsis Rab GTPase homolog G3c), GTP binding [Arabidopsis thaliana] (TAIR:AT3G16100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45881.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma factor 54, interaction; (InterPro:IPR002078) Range:  from: 19471638    to: 19473255    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g52290.1    Description:  protein kinase family protein. similar to ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1), ATP binding / protein kinase [Arabidopsis thaliana] (TAIR:AT3G24550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65522.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 19473702    to: 19476118    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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