Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------------AGL15                                                                     <---------HSFB2a(2)                                                               <---------ARR14(2)                                                               <---------ARR11(1)                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                               --------->ARR14(2)                                                         ----------->HVH21      <------MYB46(1)       ---------->DOF2            ----------->RAV1(2)  --------->ANAC58      <------MYB83      <----------ID1                ------>ZmHOX2a(1)     --------->ANAC58 ---->TOE1(2)          --------->DAG2              ------>ZmHOX2a(1) --------->HSFB2a(2) ---->TOE2(2)   <---------MYB52(1)           <----------DOF2   <-----------ARR10 ----ANAC58   <---------ANAC58               <---------DAG2   <---------CCA1(2) ----->RAV1(2)<---------ANAC46              <---------DAG2 <<<<<<<GRF7   --------->ANAC46 ----ANAC58   <---------ANAC58    --------->At4g35610<---------ALFIN1--------------->AGL15 ->P<---------WOX13(1)---------->DOF2    <---------ALFIN1------>ZmHOX2a(1)---------->DOF2       <----   tgcgagattggtaatggcgttagataaagccaaagccgatgaaacaccttttcctcctcctgacatatcttctccaagaagcaatttcgaaaatttctct  19461100                          ----------->RAV1(1)                    --------->YAB1                      <---------YAB1                         ------                 --------->YAB1                 <---------MYB59                                ------ ------DOF2   ----------->GT1      <----------DOF2 >>>>>>>>>MYB98        <----------DOF2       ------   ttcatttgctccattgctgtaataacaacaacatatactttagtttttgccctaacttataatccaagattagtactttgcccctaacttgcaatccaag  19461200         --------->CCA1(2)        --------->ARR14(2)                       <---------YAB1        --------->ARR11(3)                    <---------AHL20(2)        --------->ARR11(1)                   --------->AHL20(2)                              <-------        <---------ARR11(3)           <---------ANAC58                                       <--------        <---------ARR14(2)           <---------ANAC58                                    <---------ANAC58 --------->TOE1(2)                  --------->ZAT2       ------>NtERF2            <---------LBD16  <- --->ANAC58                    <-----------GT1<---------YAB1         --------->At4g35610 <---------ANAC58 --->ANAC58                <---------ARR11(3)<---------AHL20(1)  --------->ARR14(2)     <---------HSFC1(2) --->ANAC46                --------->ARR11(3)--------->YAB1      <---------ARR14(2)     --------->HSFC1(2)   aaacctagaagatatgagccagttcattagattttacctgcttgcaatattattagtgcctccatggaatccgatgaagagactctcggaagcttgtcat  19461300                                              ------>NtERF2                                        <---------DOF5.7(2)                                       <---------WRKY12                                        <-----                                     <-----------HVH21                                       <-------                                     <--------ZAP1                                          <--------                          ---------->DOF2 --------->ANAC46    --------->WRKY12           <---------YAB1                       --------->ANAC46<---------WRKY38(1)    --------->WRKY38(1)     --------->ICU4                    <---------ARR14(2) <---------WRKY45      <--------P          --------->bZIP60(1)                    --------->ARR14(2)--------->WRKY18(1) --------->LBD16        <---------bZIP60(1)                --------->LBD16     <------MYB83----------->RAV1(1)  ------>ZmHOX2a(1)<---------YAB1 --YAB1         ------>NtERF2       <---------DEAR3(2)   <---------ANAC46      <---------ICU4-------- ---HVH21<---------MYB52(1)         <------MYB46(1)      <---------LBD16    --------->YAB1--------->YAB1 --------YAB1 <---------LBD16      --------->MYB59      <---------LBD16  --------->YAB1<---------ICU4   tgcgattaggcgttactccgcctataggcaaagaaggtcggtcaacgctgccacattttccgggttgactcctaaacatcatcatgtcattatcatcatc  19461400                            <---------ZAT18                ------>MYB83--------->ZAT14                     --------->At4g35610                ------>MYB46(1)                <----------DOF2  <---------ZAT2             --------->MYB46(3)        --------->At4g35610      <---------At4g35610             <---------HSFC1(2)        <---------At4g35610      --------->ZAT2 ----YAB1    <---------HSFB2a(1)       --------->GLK1(1)  <---------ANAC58 --ICU4      --------->HSFB2a(1)       <---------ZAT2     <---------ANAC46 -YAB1<-----------HVH21<---------YAB1  --------->ZAT2     <---------ANAC58<---------ANAC58          - ->YAB1      --------->HSFC1(2)  --------->GLK1(2) <-----------GT1        <---------ANAC58        ---   atccaaattgtcagaaccatccattctcattgcacaatctgagctccagcttttaacatgtcttgaagctgagttttcgttcatgttcttgaaatgaaac  19461500                                                <-----------GT1                                             --------->YAB1                                             <---------ICU4                                            --------->AHL20(2)                                        <---------YAB1                  --------->AHL20(2) --------->ATHB12                                      <-----------GT1               --------->YAB1        <---------YAB1                                   <----------DOF2                  --------->AHL20(2)  -------------   --------->ATHB12               <---------ANAC58             ------------>CBF     --------->GLK1(1) -------->YAB1                    <---------ANAC58         --------->YAB1          <---------ARR11(3) ------>GLK1(2)                   <---------ANAC46      --------->WOX13(1)         --------->ARR11(3)   aatcttgatttgtaagtctcttgttcttgctccattgcttttaccattaattactagttaatcaaaacaataaaaaaaatgaaaagatttctatgatttg  19461600                                                          <------ZmHOX2a(2)                                                         --------->ARR11(3)                                                         <---------ARR11(3)                                             ====================HOX2a_HOX2a                                             <------ZmHOX2a(1)  ----------->GT1          ---------->DOF2        <-----------GT1                ---------->DOF2  <---------GLK1(1)          <-----------GT1        <---------AHL20(2)     <---------ANAC46         --------->GLK1(1)     --------->AHL20(2) <---    <----------DOF2        ------>ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXXMIR831    --------->YAB1 --------->MYB52(1) -->AGL15        <---------MYB52(1)   --------->ICU4  <------ZmHOX2a(1)     --------->TOE2(3)   -----   aaaattctttttaatctccatttgttctcctcttcgtgtaataaagaggagttttaggagatcatgaagaaaaaacaaacttaattaaccaaaaaacggt  19461700                                                 --------------->AGL15                                      <--------HAHB4      <---------AHL20(2)              --------->ATHB12                                        -------     --------->AHL20(2)               <---------ICU4                <-----------GT1        --------->YAB1     <---------AHL20(2)              <---------YAB1<---------MYB52(1)                  --------->ICU4 ------MYB46(3)         <---------ARR14(2)       <---------------AGL15        <---------YAB1 <------- ---->ALFIN1            --------->ARR14(2)      <-----------------AGL2     <---------YAB1 <---------YAB1   gtttgattttaatttcagacttagcaaatacagaacaccatcatttgacttctgttaatggttttagttttaacctgattattttagtaactattatgat  19461800                                      --------->GLK1(2)               <---------AHL20(2)                                     <---------GLK1(2)          <---------RVE1(1)                                     <---------ARR14(2)         <---------CCA1(1)                                    <---------At4g35610        <---------ARR14(2)                                   ----------->ARR10--------->AHL20(2)--------->AHL20(2)           --------->TOE2(3)   <------MYB46(1) ----------->GT1 --------->ARR14(2)                  <- --------->WRKY38(1)  ----------->GT1--------->ARR14(2)        <---------ARR11(3)                  -- -->ATHB12 --------->TOE1(3)   <------MYB83<-----------RAV1(2) --------->ARR11(3)               ----- --YAB1    --------->YAB1     --------->MYB59--------->LBD16  <------ZmHOX2a(1)          <-----------GT1   tcgttgtccataaccataaacaagtagtgaatttggtcagattcttcaggggaaaaaaataagaggatatttttaattttcttgaaatgttttactattt  19461900                                 --------->MYB52(2)                               <---------MYB52(1)                             --------->ANAC58                             --------->ANAC46                             --------->ANAC58                            ------->TEIL                           <---------ALFIN1                                   <----------DOF2                          <------NtERF2                              --------->ARR11(3)                       <---------At4g35610                          --------->CCA1(1)                       --------->At4g35610                          --------->RVE1(1) --------->AHL20(2) --------AHL20(2)    --------->ZAT18                   <---------ALFIN1--------->TOE2(3) ------->AHL20(2)   --------->ALFIN1              <-----------GT1 --------->AHL20(2)<----------DOF2 ---->YAB1        --------->ALFIN1    ---------->DOF2<---------ALFIN1<---------ARR11(3)   ataaattgatacttggtggaatgtgggctgcacgttatttgaaagttgaatttctccacacacataaaaaaaatctcaatctttttctttaaatcaaaca  19462000  Previous    Next  AGI:  At1g52240.1    Description:  ATROPGEF11/ROPGEF11 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF12/MEE64/ROPGEF12 (MATERNAL EFFECT EMBRYO ARREST 64), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT1G79860.1); similar to pollen-specific kinase partner protein [Lycopersicon esculentum] (GB:AAW57535.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 19459435    to: 19461535    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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