Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <-------TEIL                                     <--------P                                   ----------->GT1                                  --------->DAG2            ---------->DOF2                                  <---------TOE2(3)      --------->TOE1(3)------>MYB46(1)                                ---------->DOF2          --------->TOE2(3)------>MYB83                         <---------ANAC46                <---------MYB59<---------MYB111(1)                         <---------ANAC58              <-----------------AGL1                         <---------ANAC58             <-----------GT1--------->REM1(1)     ----------->GT1<-----------RAV1(1)    <---------AHL20(2)        <---------ALFIN1           -----   gagaaaaatgtgacaatcgtcgatgttgcttacaaaaaggttgattttattcaaattaacctaaaaggcctacacctactatattttagatgggatgagg  19429200                                                                                   ------>MYB46(1)                                                                                   ------>MYB83                                                                                   --------->MYB52(1)                        <----------DOF2                                           --------->MYB55(1)                     <---------ARR11(1)                                          <---------MYB111(2)                     <---------ARR11(3)             --------->ANAC58             <---------MYB59                     --------->ARR11(3)             --------->ANAC46             <---------MYB52(2)                    <---------CCA1(2)    --------->ZAT18                         <---------MYB46(2)                ----------->RAV1(1)      <-------TEIL                            <---------MYB111(1)         --------->AHL20(2)             --------->DOF5.7(2)                     --------->ANAC46 ->NtERF2<---------AHL20(2)      --------->WOX13(1) --------->ANAC58     <-----------GT1<-----------HVH21   cccaatacgatttaaatgcaacatatctttttagtcattcacgttcactaacttaagcaactctcaactctatatttgctctacctaacgcttcagagat  19429300               <---------ZAT18             --------->ANAC46                                                       ----------->GT1            --------->DEAR3(1)                                                      --------->ANAC46           --------->MYB46(3)                                                       <---------ANAC55(2)           <---------ALFIN1                                           <---------------AtSPL8  -------         <---------ALFIN1                                          --------->YAB1   --------->ANAC58    ------->MYC2                                             --------->YAB1         --------->ANAC58    <-------MYC3                           --------->At5g28300    <---------YAB1    --------->ANAC55(2)    ------->MYC3                        <---------At4g35610  --------->TOE2(3)   <---------ZAT14    <-------MYC2----------->RAV1(1)     --------->At4g35610  --------->TOE1(3)   <---------ZAT18   <---------ALFIN1  <-------TEIL   --------->ALFIN1  <----------DOF2<---------YAB1 --------->ANAC55(1)   tggccacatgcccacagcccacatacatcgaccagagggtgaagctgtaaatgtttcttttaatcttaattataagtacttagtacacgtaaaatgaacc  19429400                               --------->MYB46(3)                        <---------GLK1(2)                   ----------->RAV1(1)                          --------->YAB1                --------->ANAC46                               <---------YAB1               ------>ZmHOX2a(1)  ---------->DOF2  ----------->GT1 >TEIL    <----------DOF2<-----------ARR10  <---------------AGL15                   <-------TEIL   agaacataaaccctttcctcccaacaggttctaaccaaaagttttccaatacatagtaatatagtatgatagtagtaactaagacatacgttggaagttg  19429500                                                                                                    <                                                                                        --------->RAP2.6(2)                                                                                        --------->ANAC58                                                                                        --------->DEAR3(1)                                                                                        ------->GAMYB                                                                                        --------->DREB2C(2)                                                                     ------->TEIL       --------->ANAC58                                                                  <---------ATHB12      --------->ANAC46                                                                  <---------YAB1       --------->MYB46(3)                                                            --------->REM1(1)          <---------MYB55(2)             ----------->GT1     --------->MYB52(1)         <---------ALFIN1           --------->DEAR3(2)        <---------TOE2(3)       --------->AtMYB61         ----------->RAV1(1)          <------------AtMYB77    <----------DOF2            --------->MYB46(3)      --------->ANAC58             --------->MYB46(3)  --------->At4g35610         ------->TEIL             --------->ANAC58 <---------YAB1-------->P   --   gaacagcttcaaggtatgtaaatttgtttatgaaccaccagactgaaacagtaagagaagcaacacctatgaatatgcttacttcatcaaccgccattct  19429600        ----------->GT1                                                                   --------->ARR11(3)       --------->DAG2                                                                     --------->GLK1(2)     ---------->DOF2               ----------->GT1                                        <---------ARR11(3)    <---------AHL20(2)            --------->DAG2            <------------CBF        ------>MYB46(1)  <---------YAB1                 ---------->DOF2          --------->ARR11(3)        ------>MYB83  --- ---------AHL20(2)    <---------AHL20(2)            --------->YAB1                 ----------->RAV1(1) ------->AHL20(2)    --------->AHL20(2)        <---------ZAT18                   --------->MYB46(3) -   atttattaaaaggtgaaatctcataaaatttcacaaaaagttatatcagtgccatcttaacatattgtcaagtctctggcaaaaccaacaaaaatctaaa  19429700                                                       <---------AHL20(2)            ---------->ID1                                                       --------->AHL20(2) <---------DAG2     <-------   --------->TOE2(3)                         <---------MYB52(1)           <----------DOF2<----------DOF2 --------->CBF                              <---------DAG2 <---------AHL20(2)     <-----------GT1 -------->WOX13(1)                          <----------DOF2--------->AHL20(2) <---------AHL20(2) <---   atcaatctcaaactactcattttgaaacttcattctgttttctctcctttatgttttttaattaatcttcttgcaactttttattttctcgctttctttt  19429800                                               <---------ICU4                                              --------->ICU4                                              <---------YAB1                                     ----                                            <---------ICU4                                       <---                                            --------->YAB1                                      <----                                         --------->YAB1<---------ANAC46                         -----                                     <-------TEIL<---------YAB1                         <-----------RAV1(1) ---DOF2                  <---------ANAC58  <--------HAHB4                    <---------YAB1--------- --------GT1              <---------ANAC58 <---------YAB1             --------->WRKY18(1) ---------->ID1   ttccaagtctcaactctcaacatggtttgctcgtctacgtccattatcattattctagtgtgtgtttttgtggtcaaactattctagtttttgttgcaat  19429900                                                <---------TOE2(3)                                              <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(2)                                <---------ARR14(2) ----->MYB52(1)                --------->AHL20(1)                           ---------->DOF2 ------ICU4           <---------ATHB12       --------->AHL20(2)        --------------->AGL15 -----ATHB12         <---------TOE2(3) ----------->HVH21               <---------------AGL15 ---->ICU4        <---------MYB52(2) --------->At4g35610               --------->ZAT6     <----------DOF2 --->CBF <---------GLK1(2)     <---------AHL20(2)                --------->ANAC46--------->ARR14(2)   aactgcaactagattcttcaactaatgaaggaataaattagatgacatttaatgtttcatacatcatacatcaccactaaaagtatacgtttcttttctt  19430000                                                                                                   <-                                                                                                   <-                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                --                      <--------ATHB1        --------->AHL20(2)                                     <-                      <---------ICU4        <---------AHL20(2)                                    <--                      --------->AHL20(2)  --------->AHL20(2)                                  <------                      --------->ATHB51 --------->AHL20(2)                                  <---------                     <---------ATHB12  <---------AHL20(2)                                 --------->AHL20(2)                     <---------ATHB51  <---------AHL20(1)                                <---------AHL20(2)                 <---------ATHB12      --------->AHL20(1)               --------->AHL20(2)<---------AHL20(2)             <---------AHL20(2)       --------->AHL20(2)              <---------TOE2(3)  --------->AHL20(2)             --------->AHL20(2)----------->GT1        --------->At4g35610         ----------->GT1 ---       <----------DOF2--------->YAB1  <---------AHL20(2)      ----------->GT1  <------ZmHOX2a(1)  ---   atatacaaactttattttaatcaataatttctagggtgaattaaatttatatactcagaagaagtggaaattaagaaaataggagagataatttaaaaat  19430100  Previous    Next  AGI:  At1g52180.1    Description:  major intrinsic family protein / MIP family protein. similar to DELTA-TIP (delta tonoplast integral protein), water channel [Arabidopsis thaliana] (TAIR:AT3G16240.1); similar to aquaporin [Helianthus annuus] (GB:CAA65186.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 19428613    to: 19429597    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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