Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(2)                                                                                  <---------YAB1                                                          <-----------GT1        --------->AHL20(1)                                                         <---------ARR11(3)      --------->AHL20(2)                                                --------->AHL20(1)              <---------ICU4                            <---------TOE2(3)   <---------AHL20(1)             --------->ICU4     --- ------>At4g35610    <---------AHL20(2)         <---------AHL20(2)    ----------->GT1       --------- ->GAMYB             --------->AHL20(2)        --------->AHL20(2)    <---------HSFB2a(2)    --------- ->ANAC58       <---------AHL20(2)             --------->YAB1<----------DOF2--------->AHL20(2)   ---- ->ANAC58    --------->TOE2(3)                 <---------AHL20(2)    --------->HSFB2a(2)    --------- >P------->TEIL--------->AHL20(2)          <---------YAB1<---------AHL20(1) <---------AHL20(2) ------   agttgaatctttcaacataaaatttaaattagggtattgtgttttctaattatattcaatatactttctgtctcgaaaataaatattatataccaagaca  19370200                                          <---------AHL20(2)                                         --------->AHL20(2)                                  --------->LBD16                                 <---------LBD16                                <---------ANAC58                                <---------ANAC58                                                 <--- ------>AtMYB61                 <---------AtLEC2           <---------MYB52(2)                    ---- >ANAC58                        <---------ANAC46           --------->MYB46(3)                    <--- >ANAC46                     <xxxxxxxxxxxxxxxxsmallRNA(s)<-----------GT1  <---------REM1(1)      ---- ----->MYB46(3)             <---------ANAC58         --------->AHL20(2)   <-----------RAV1(1)   ----- >ANAC58                    <---------ANAC58         <---------AHL20(2)  <---------TOE2(3)      <---- --->ANAC46  ---------->DOF2<---------ANAC46 --------->AtLEC2   --------->TOE2(3)          --------->YAB1   ccaccaattgtttttaaaagagaaggaatggcttgcctggaaattttatgcaaaatttataacaaacctatatttgatgttgccaaaaaacaaacaaaat  19370300                                                                <---------ICU4                                                                --------->YAB1                                                               <---------YAB1                                                     <---------AHL20(2)                                                     --------->ATHB51                                                     --------->YAB1                                                     <---------ICU4                                                     <--------HAHB4                        <---------AHL20(2)                                                     -------->ATHB1                       <---------AHL20(1) <-------TEIL                                        -------->HAHB4                       --------->AHL20(1) ------AHL20(1)                                     <---------YAB1                       <---------AHL20(2) ----->AHL20(1)                                     <---------ATHB51              ----------->GT1 ------AHL20(2)                           <-------TEIL <---------YAB1       ----------->HVH21 ----->AHL20(2)                   <---------ZAT6    --------->ICU4        --------->ANAC55(2) ---->AHL20(2)             <---------AHL20(2)    <---------AHL20(2)       <---------ANAC55(2)  <----- -----AHL20(2)             --------->AHL20(2)  --------->ANAC55(2) <-----------GT1<---------ZAT6   aaattcataccatattcaaaacttactatatatatagtgttatgttcatatgtaattattatctcattataacattatgtgatagtgttatatatatttt  19370400                                                              ------>ZmHOX2a(1)                                                          ------>ZmHOX2a(2)                                                         --------->GLK1(1)                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                    <---------At4g35610                             ----------->GT1        <---------ZAT2                           <---------ANAC46         --------->At4g35610                  --------->AHL20(2)                           --------->ALFIN1      ================HOX2a_HOX2a            --------->AHL20(2)                         <---------ANAC58  --------->YAB1<---------GLK1(1)  --------->ATHB12 --------                         <---------ANAC58 ===========================HOX2a_HOX2a  <---------ZAT6-----                         <---------ANAC55(1)     <------ZmHOX2a(1)<---------ZAT6  <---------ANAC46                         <---------ANAC46 <------ZmHOX2a(2)  --------->TOE2(3)    ----------->GT1 ----AHL20(2)   --------->ZAT6            ==============HOX2a_HOX2a       --------->TOE2(3) ---------   agtgaagaagagggaataagactattggcgtgtgtaaatagtggatcataaggaagctgatctccttagtattaaacatcagtggtgtaaataaaaaagt  19370500                    <---------------AGL15                                              <------MYB46(1)                    --------------->AGL15                                            <---------WOX13(1)                   <-----------------AGL3                                          --------->ATHB12                   <---------ANAC55(2)                                             <---------MYB46(3)                   <---------ANAC46                                               <---------YAB1                   <-----------------AGL2                                      --------->ALFIN1                   ----------------->AG          <---------AHL20(1)        <---------ZAT14                   ----------------->AGL3        --------->AHL20(1)        --------->ZAT14                   <-----------------AGL1        --------->ARR11(3)      <---------ZAT14       ------      <------ZmHOX2a(1) --------->YAB1          --------->AHL20(2)   ------>ZmHOX2a(2) <------MYB83 ->DAG2   <---------At4g35610            ---------->DOF2         <---------YAB1<---------AtMYB61 ---->ALFIN1  --------->MYB52(2)   ----------->GT1             --------->YAB1<---------ANAC46  ------ ->DOF2   --------->At4g35610     <------ZmHOX2a(1)      --------->YAB1  --------->ZAT14     *TSS   gtggataaggagagcttagttacctataatggctgaggagagaaaaagaaatatatagatgataaccatgatcgctgtgctgtggtgattggtgaagaag  19370600                  <---------AHL20(2)  <----------DOF2          --------->GLK1(2)     --------->HSFB2a(2)                       <---------ANAC58         <---------GLK1(2)      <---------HSFB2a(2)                       <---------ANAC58    ----------->HVH21        --------->ARR14(2)                           <---------ANAC46    ----------->TGA1    --------->ANAC46<-----------------AGL1          <---------ZAT18 --->ANAC58     <-----------TBP<---------LBD16        <-----------GT1   --------->ZAT18 --->ANAC58  <---------YAB1  <---------ARR14(2) ----------->GT1  <-----------GT1     <---------YAB1   ccatggctgacgattcttatttatacacacagttctgggtctttcacatatggaaattactagtttataactagtggcctatgaggcattatagaaaaat  19370700                                                    >>>>>>>>>>FUS3                                                    >>>>>>>>>>ABI3                                                   --------->ANAC58                                                   --------->ANAC58                                               --------->ANAC58                                               --------->ANAC55(1)                                               --------->ANAC58                                       --------->REM1(1)            --------->MYB52(1)                    <----------DOF2    <---------ALFIN1          --------->YAB1              <-----------GT1      --------->At4g35610   <---------AHL20(2)     --------->ANAC46         <---------YAB1  ---------->DOF2       --------->ANAC46--------->AHL20(2)         ---------->DOF2 <-----------GT1   <---------DAG2  <---------At4g35610  --------->AHL20(2)<---------DEAR3(2)   gtttatcagttcttattttcgccttttaaaagtatttagctacacttacacgcatgcattaattttaaaataacgtcgattcaagcgatatagaaagaaa  19370800                                          --------->AHL20(2)                                         <---------AHL20(1)                                         --------->AHL20(2)                                 <---------GLK1(1)                                 --------->GLK1(1)                           <---------ANAC58                           <---------ANAC58            <---------ANAC46                           <---------ANAC46   <-----------GT1                          --------->ATHB12<---------AHL20(2)                         <---------YAB1  <---------AHL20(2)                       --------->YAB1    --------->AHL20(1)           <-----------GT1   --------->TOE2(3)--------->YAB1      --------->AHL20(2)        --------->AHL20(2) <-----------GT1   ctatttcttaaaaaacatggatttataatgcttggatatcaaattaatttacaagttgtgttttttttttatatacaggcttacatttaaccaaaacgtt  19370900                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                                                  --------->TOE2(2)                                                                  <---------SPL7                                                                 <---------ANAC58                                                                 <---------ANAC58                                             <---------AHL20(2) <---------------AtSPL8                              --------->AHL20(2)             <---------YAB1                             <---------WOX13(1)   <---------AHL20(2)--------->SPL7            <------                          <---------YAB1     --------->AHL20(2) --------------->AtSPL3     <---------ARR11(3)                  ------->TEIL<---------AHL20(2)  --------->AHL20(2)<---------TOE1(2)      <---------GLK1(2)               <---------ATHB12     ----------->GT1       <---------YAB1                   --------->ARR11(3)   tttgagcttgaaaacaaatgaatatgttttgattaattgtgtaacatttaaattaaacttattaatatcgtacgtggacttatatgttttttagattttc  19371000                   --------->LBD16                  <---------HSFB2a(2)                  --------->HSFB2a(2)                  --------->HSFC1(1)                  <---------HSFC1(1)                                 --------->AHL20(2)                 <---------LBD16                                     <---------AHL20(2)            ------->TEIL                    <---------ICU4        ----------->GT1           <---------AtLEC2                <---------YAB1    --------->AHL20(2)        <-------MYC2                    ------>ZmHOX2a(1)  --------->ANAC55(2)        ---------------        ------->MYC2                --------->ARR14(2)     --------->ANAC55(1)   --------->LBD16        <-------MYC3                <---------ARR14(2)     <---------ANAC55(2)  --------->LBD16        ------->MYC3               --------->GLK1(1)   <-----------GT1         ----------->RAV1(2) -----GT1 <-------TEIL      <----------DOF2--------->ICU4--------->ZAT6  <-----------GT1  ------->TEIL   tatatgcacacatgcatgttctggaaaacactttcacaaatcctcatgatgagtttataacacttaattagttaattactcccctgaatatgtactcccc  19371100  Previous    Next  AGI:  At1g52070.1    Description:  jacalin lectin family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52060.1); similar to myrosinase binding protein [Brassica napus] (GB:CAA70587.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 19368557    to: 19370593    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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