Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----->LBD16 ---->ANAC58 ---->ANAC46 ---->ANAC58 --->HSFB2a(2)                                                                         <---------AHL20(2) ----HSFB2a(2)                                                                   --------->TOE1(1) ->MYB52(1)          --------->ZAT14          --------->YAB1                     --------->TOE2(1) >P            ------>ZmHOX2a(2)          --------->ICU4                    --------->AtMYB61       - -ALFIN1  <---------WOX13(1)       <----------DOF2    <---------TOE2(3)     <---------ALFIN1<--------   gaaacaccatggattgatccctctacagactgtccatctttgacataatcaaatttgatgtattgtatgccttcaagaccacctcgtatataaacttttg  19363900                ------>NtERF2              --------->ATERF1(1)              <------NtERF2             <---------ATERF1(1)             <---------DEAR3(2)             ------>NtERF2            --------->ATERF1(2)            <---------ATERF1(2)            <---------DEAR3(1)            <---------RAP2.6(2)            --------->RAP2.6(2)              <---------ALFIN1      --------->YAB1                    <----------DOF2      <---------ICU4           <---------ANAC58               <---------DAG2     <---------YAB1  <---------ICU4    <---------DAG2         <----------DOF2 -------->REM1(1)   <---------ATHB12 ------>NtERF2<---------MYB52(1)                    ------->TEIL --DOF2    <---------LBD16     <---------ANAC58  --------->TOE2(3)                     <---------CCA1(2)   ctacattatcatggccggctccatcatcccattccttgccccctttcccacccttagcctccaacttttgggccattgcaaacccatttgaatctttata  19364000                                               <---------AHL20(2)                                              <---------AHL20(2)                     ----------->GT1         <---------YAB1                --------->YAB1             <--------HAHB4                -------->ATHB1             --------->ATHB51                --------->ATHB51           <---------ICU4                     --------->ANAC58               <---------YAB1             <---------YAB1                      --------->ANAC58            <---------YAB1                --------->ICU4      --------->TOE1(3) --------->YAB1      --------->AHL20(2)    <---------AHL20(2)--------->AHL20(2)    <----------DOF2         --------- --------->AHL20(2)  <---------ZAT6    <---------YAB1         --------->TOE2(3)<---------ATHB12   cataaaaattgaatactattattgtgttatataatcttcttgtcattattaattttactgagaacattaactttctagccaagcatcaatgtgttaaaga  19364100                               <---------TOE1(3)                             ------->GAMYB                            --------->MYB46(3)               ------->TEIL                        <---                            <---------MYB52(2)           --------------->AtSPL8                  <---                            <---------MYB55(2)           <---------------AtSPL8                ------                            <---------MYB111(2)         --------->YAB1                       --------                            <---------MYB46(2)         --------->ICU4                        <-------                    --------->ICU4             <---------ARR14(2)                          <---------                 <---------YAB1<---------TOE2(3)       <---------ATHB51                  --------->DAG2               ----------->GT1--------->MYB52(1)  --------->ANAC46         <---------AHL20(2)--------      ---------->DOF2 <-----------GT1     ----------->RAV1(1)<-------TEIL  --------->AHL20(2)<------- ->DOF2   ---------->DOF2   <---------MYB111(1)--------->ARR14(2)     <---------TOE2(3) ---------->DOF2   aaatggaagaaagaaagttgtaattatccaactaacgtttggagccacatatacacaattatgtacataatttagattaaaatataggggaaaagtgtac  19364200                                                                       <---------------AGL15                                                                       --------------->AGL15                                                                      <-----------------AGL3                                                                      ----------------->AGL3                                                                      <-----------------AGL1                                                                      <-----------------AGL2                                                                      <---------ANAC46 ------DAG2                                                           ----------------->AG -------DOF2                                                 --------->At4g35610                    - ->TEIL                      --------->ATHB12                <---------HSFC1(2)                     < ->ZAT14                    <---------YAB1                   --------->HSFC1(2)                     - --ZAT18          --------->ARR11(3)                         <---------At4g35610                   -- ------AtSPL8     <---------ARR11(3)         --------->MYB52(1)       <---------ANAC55(2)     ------- ->ZAT18         --------->RVE1(1)        --------->YAB1  <------ZmHOX2a(1)--------->YAB1 ---------->DOF2 --ZAT14         --------->CCA1(1) <---------ANAC46<-------TEIL  --------->MYB52(2)  <------ZmHOX2a(1)   tttatgttctctctagcaaatatctgaaacatgaatggtgtgaatgaaaacggtgcataaggaagcttagttacctataatggctgaggagagaaagaga  19364300                --------->ICU4                <---------YAB1              <---------ICU4                   --------->At4g35610              --------->YAB1        <---------WOX13(1) -------->AHL20(1)                --------->ATHB12 ---------AHL20(1)                <---------MYB46(3)                    --------->ANAC46 -------->ARR11(3)               <---------YAB1<---------At4g35610  <---------AHL20(2)            <-- ------->AHL20(2)   ------>ZmHOX2a(2)       *TSS            --------->ICU4              <----------DOF2 ---->GT1   --------->ARR11(3) --------->YAB1 --------->GLK1(2)   <-----------TBP   <---------At4g35610   aatatatagatgaaaatcatgatcgatgtgctatggtgattgatgaagaagctgaaatcgaaatgcttatttatacaccaagttttagctctttcacaaa  19364400                          <---------ANAC46                        --------->ZAT18                        <---------ZAT18                 <-----------GT1                                      <---------ICU4                <---------AHL20(2)           <---------TOE2(3)       <---------YAB1                --------->AHL20(2)------------>CBF                 --------->YAB1   ----------->GT1-- -----TEIL <---------AHL20(1)   <---------TOE2(3)                 <-------TEIL   ------------>MYB.PH3(2)   tgcatattactagtatatttaactagtggcctctaaggcaatagattaatgtttctcagttctcaagtttcatcattttaagtagtttgttatatatact  19364500                                                        ---------->DOF2                                                 --------->TOE1(3)                                                 --------->YAB1                                           --------->ANAC46                      --------->ANAC46     --------->ANAC55(2)                   --------->ZAT14         --------->ANAC55(1)                   <---------ZAT14         --------->ANAC58                              ---------->DOF2                   --------->ZAT18         --------->YAB1                            --------->GLK1(1)          ---------->DOF2  --------->MYB46(3)    --------->TOE2(3)                   <---------GLK1(1)       --------->TOE2(3)--------->ZAT14    --------->ANAC58                   --------->ATHB12 ------->ZAT6 ---------->DOF2            <---------DOF5.7(2)                <---------TOE2(3)   aatactatttcttaaagaaagttcactgaaccaatagactcgtaaacgtaatcttaatgaaagaacaatatggatgctaatgtttggatatcaaagtaag  19364600                       --------->ANAC55(2)                       <---------ANAC58                       <---------ANAC58               --------->AtLEC2     <---------AHL20(2)            <-------TEIL--------->LBD16         <---------ANAC46           --------->AHL20(2)                                            ---         <---------ANAC58 <---------ARR14(2)         ----------->GT1                        <--------         <---------ANAC58 --------->ARR14(2)        ----------->GT1                      --------->ICU4        --------------->AtSPL3      <---------AHL20(1)            --------->YAB1         <---------ATHB51     ---------->DOF2   <---------ANAC46         <-----------RAV1(2)                 --------->ANAC46<    ---------->DOF2--------->At4g35610        --------->AtLEC2  <---------ZAT14  <-------TEIL     <--    --------->MYB52(1)<---------LBD16<---------AHL20(2)         --------->ZAT14 --------->CCA1(2)<---  --------->TOE2(3)<-------GAMYB    --------->AHL20(1)  --------->AHL20(2)  <---------TOE2(3)    ----  --------->TOE1(3)<---------At4g35610    <-----------GT1   <-----------GT1---------->DOF2--------->YAB1   ttaacctaaaggcgtacatgcagttgcggatttagaaataaaatttacatgcaggggataaaatactatactaattttaaagatacaaacaattatgtta  19364700                                                               --------->ALFIN1                                                              --------->TOE2(2)                                                              --------->TOE1(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                             <---------bZIP60(2)                                                             <---------TGA1a                                                             --------->TGA1a                                                             <---------O2                              --------->AHL20(2)             --------->O2     --------->AHL20(2)       --------->YAB1                 <---------ANAC46     <---------AHL20(2)    --------->YAB1                  <---------DOF5.7(2) --------->AHL20(2)      --------->AHL20(2)                --------->MYB52(1) ------>YAB1             --------->AHL20(1)              <---------MYB52(2)           --------->ALFIN1 -YAB1                  --------->YAB1             <---------AHL20(2)                <------ZmHOX2a(1) ---------YAB1     <------ZmHOX2a(1)               <---------YAB1              ------->TEIL -------ICU4      <----------ID1     <-----------GT1--------->YAB1          <---------YAB1        <-- ------YAB1       ----------->GT1<---------ICU4   --------->AHL20(2)      <---------ICU4          <-- ----->ICU4      ----------->GT1--------->ICU4  --------------->AGL15     --------->YAB1          <--   ttattatttaaattctaaataggaaaaaataataatatttatccacatttcatataatagctaacgtgggatttgatcatgaatttaggaggggcaagtt  19364800  Previous    Next  AGI:  At1g52060.1    Description:  similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT1G52070.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 19362708    to: 19364344    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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