Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                               ------                                                                                            ---------                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                        ------->GAMYB                                                                                        ----------->RAV1(1)                                                                                        --------->AtMYB61                                           --------->YAB1                              --------->MYB46(3)                                   --------->YAB1                                    --------->WOX13(1)                    ----------->HVH21 --------->YAB1                                <---------WRKY12          ----------------->AGL3  <---------YAB1                                    <---------WRKY38(1)       <---------CCA1(2)        <---------ZAT6               <-----------GT1       --------->WRKY18(1)     ------>ZmHOX2a(1) --------->ZAT6<---------YAB1<---------GLK1(2)              <-----------HVH21   tttagtcctatatccatattttgtgacactactagtattataaaaacataacaaattctcaagttacacttctcgttttgtttgggtcaaccacacaaca  19308600          <---------------AtSPL8                                      ---------->DOF2         <---------ANAC46                                      <---------WOX13(1)                ----         <---------ANAC58                                   <---------YAB1                     ------       <-----------GT1                                 <---------AHL20(2) --------->AHL20(2)  ------- ------>AtMYB61                                     ------->TEIL ----------->GT1            --------- --->ANAC46     ---------->DOF2            <-------GAMYB    <---------AHL20(2)           --------->AHL20(2) >ANAC46 <---------ANAC58                 <-----------RAV1(1)--------->ATHB12        --------->AHL20(2)   ccacaagttttacttgtacaaagtaattgtttgtttatgtttttctgttgtatgtattttttttaattggtcaaaagaaaatatgttttaaataaaaagg  19308700                                                                         <----------DOF2                                                                        --------->TOE2(3)                                                                        <---------------AGL15                                                                        --------------->AGL15                                                           ------>ZmHOX2a(1)  ---------->DOF2             --------->CCA1(2)       <---------ANAC58 ----------------->AG---------- ------->GT1               <---------TOE2(3)          <---------ANAC58 ----------------->AGL1 ----->GT1                 <---------YAB1         <----------DOF2      <-----------------AGL1 -->DAG2               --------->YAB1        <---------ANAC58    --------->ZAT14          ----------- ->DOF2               --------->ICU4         <---------ANAC58  --------->ANAC46    <------NtERF2   tgaaaaaaggcctatgggattggaataataagatagaaaacaaaatagcatgctttgcttcctccactaaacttcctttaagggcagagagagagataaa  19308800        <---------ANAC55(1)                                                <---------AHL20(2)        <---------ANAC55(2)                                                --------->AHL20(2)        --------->ANAC55(2)                                                --------->ATHB51        <---------ANAC58                <---------YAB1                     <--------ATHB1        <---------ANAC58               <---------AHL20(2)                  <---------ICU4    <---------ANAC58             <----------DOF2                          <---------ATHB51    <---------ANAC58             <---------DAG2                           <---------ATHB12         <-   --------->ATHB12       ---------->DOF2                                 --------->ICU4          <<< <---------WOX13(1)--------->ANAC46  <---------YAB1          <-----------GT1                 <------- ->GT1  <---------ANAC46 --------->AHL20(2)  <---------AHL20(2)         --------->YAB1  <---------At5g28300 >GT1<---------WOX13(1)  <---------ATHB12<---------AHL20(2) --------->AHL20(2)         <-----------GT1   aagattgattgcgtgtgtttcacaccaataaatccctttatttttattttttggtctccaaatttactaacttctaataatttccaattttaccccttat  19308900                                    <---------TOE1(2)                                  <---------ANAC58       <---------MYB52(1)         <---------ANAC58      <----------DOF2    --------->ANAC46                                 <---------ZAT6 ----------GT1          <---------At5g28300                         --------->GLK1(2) <<<<<<<GT-3b          <-----------GT1   ----------->TBP           <---------GLK1(2)*TSS         ---- --MYB52(1)    <-----------GT1<---------GLK1(1)              ------>ZmHOX2a(1)    XXXXXXXXXXXXXXXXXXX   ttttcttcctttggttttaacctattcactgcatttccttggtataaaatccaacttcttctccttcaagaatctagagatagagagagagagagaacac  19309000                                    <---------TOE2(3)                            --------->DAG2                      ------>MYB46(1)                      ------>MYB83 <-----------GT1        ---------->DOF2    ---------->DOF2   ----------->GT1    ----------->RAV1(1)                              ----------->GT1  ----------->GT1    --------->ANAC46                --------->DAG2--------->ATHB12 --------->ALFIN1   --------->MYB46(3)     ---------->ID1      <----------DOF2 ------>DOF2       --------->DEAR3(2)     <-----------GT1 ---------->DOF2    ---------->DOF2<-------- XX>MIR2936  --------->CCA1(2)    <-----------GT1  ---------->DOF2<---------YAB1    <---------ALFIN1   aaagtgggaaaaaagataagaacccaccataaagttttaacatttttcccttcaaaaggcgaaagcttttgatttgtataaaagtcccacttaatcacct  19309100                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                             <---------RVE1(1)                                                                      --------->At4g35610                                                                      <---------At4g35610          <-                                               <---------ANAC58    <---------ZAT14         ----------   <---------GLK1(2)          <----------DOF2  <---------ANAC46    --------->ZAT14     --------->MYB52(1) ---GT1<---------YAB1     ------>ZmHOX2a(1)    <---------ANAC58   <---------REM1(1)<-----------GT1---   ctctagcttctcattccatttccatctcctctcttttgttttctaagttgcttcaagagttttggatagtgtagcagagagattttaactaatgggttta  19309200                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                 <---------------AGL15                    <---------WRKY12                                                 <----------DOF2                          <---------WRKY38(1)                                                 ===============================================MADS_MADS                                              <-----------GT1                             <---------WRKY45                                           <---------ARR11(3)                            <<<<<<<<<<WRKY18               <---------AtLEC2            <---------GLK1(2)                             --------->WRKY18(1)               <---------ANAC58            <---------ARR14(2)                            <<<<<<<<<<WRKY62               <---------ANAC58            --------->ARR11(3)                            <<<<<<<<<<WRKY40               <---------ANAC46            --------->ARR14(2)                      <----------DOF2          <----------DOF2           <---------HSFB2a(2)                        <-----------------AGL1 --------AHL20(2)                   --------->HSFC1(1)                        <<<<<<<<<TBF1---------- ->GT1 ---------->ID1               --------->HSFB2a(2)         <---------ANAC58--------------->AGL15 ------>AHL20(2)     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------ANAC58<---------------AGL15   taaaattttgttcttttgcgtgaacaagttgtcaacttctagacagattttctttttgaagtgttttcttgtcgaaattcttcttcttttggtcaaagaa  19309300                                                                                <---------WRKY18(1)                                                                              <---------WOX13(1)                                                                              <----------DOF2                                                                             <---------ANAC58                                                                         --------->ZAT2                                                                         <---------HSFC1(2)                                                                         --------->At4g35610    --------->GLK1(2)                     <-------GAMYB                  --------->HSFC1(2)   <---------GLK1(2)                     ----------->GT1 --------->At5g28300 <---------ANAC58   <---------ARR11(3)       --------->RVE1(1)     --------->ANAC58       <---------ZAT2 ----->ANAC58             --------->AHL20(2)      --------->ANAC58    --------->LBD16   <---------ICU4 ----->ANAC58      ------>ZmHOX2a(1)   <---------ANAC46 ----------->GT1  <---------At4g35610 ----->ANAC46  <---------ARR14(2) --------->MYB52(1) --------->MYB52(1)  --------->HSFB2a(1) >DOF2         --------->ARR14(2)------>ZmHOX2a(1)--------->ANAC46   --------->ANAC46  <---------YAB1   cgcaagattcttctgtagttcctctaaaaaaaatcctaatggagggttattcaagaaacggtgaaatctctccgaagctgcttgacttgatgattccaca  19309400                                                               <---------At4g35610                                                               --------->At4g35610                                                          <---------ANAC58     ----------->RAV1(2) <-                                                          <---------ANAC58   <---------ALFIN1   -----      --------->ARR11(3)                         <------ZmHOX2a(1)---------->DOF2               <----   agagagaagaaattggtttcacgatgagaaaaactctgttttcaaaacagaggagaagaagcttgagctaaagcttggaccacctggtgaagaagatgat  19309500  Previous    Next  AGI:  At1g51950.1    Description:  IAA18 (indoleacetic acid-induced protein 18); transcription factor. Identical to Auxin-responsive protein IAA18 (IAA18) [Arabidopsis Thaliana] (GB:O24408;GB:Q8L9I9); similar to PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G16500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45812.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 19308984    to: 19311179    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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