Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(2)                             --------->AHL20(2)                            <---------YAB1                          -------->HAHB4                          --------->ATHB51                          <--------ATHB1                          <--------HAHB4                          <---------ICU4                          --------->YAB1                         <---------YAB1 --------->AHL20(2)                                <----------DOF2                         <---------ATHB51                                                 <---------DAG2                         --------->ICU4 <---------AHL20(2)                          <---------MYB46(3)                         --------->AHL20(2)   --------->YAB1                        ----------->GT1                       --------->YAB1  --------->AHL20(2)                         <---------WOX13(1)             <---------At4g35610 --------->AHL20(2)                             --------->ATHB12             <---------ZAT2 --------->ICU4   <---------YAB1                    <---------AHL20(2)     --------->ICU4   <---------YAB1--------->AHL20(2)                         <---------YAB1   ---------->DOF2  --------->YAB1  <---------AHL20(2)                        --------->AHL20(2) ------>YAB1 --------->At4g35610 --------->YAB1 <---------YAB1                <---------AHL20(2)   tcatataaagatgagagctgaactataataattaataaaaaattaatatgataatttagtatcaaatctaatttgttgattttaattggttacttttttg  19177300                                                                                                   <-                                                                                   <---------AHL20(2)                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   --------->AHL20(2)                                                                                  --------->AHL20(2)                                                                                 <xxxxxxxxxxxxxxxxxxx                          <---------AHL20(2)                                 --------->AHL20(2)   <xx              <---------AHL20(2)      <-----------GT1                 <-----------GT1      <xxxxxxxxx           ------->TEIL   --------->AHL20(1)                      <---------AHL20(2)     <xxxxxxxxxxx      <---------ICU4      --------->AHL20(2)         ---------->DOF2 --------->AHL20(2)  <xxxxxxxxxxx   --------->YAB1        --------->AHL20(2)  --------->AHL20(2)   --------->AHL20(2)     <xxxxxxxxxxx  <---------AHL20(2)     <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2)<---------AHL20(1)  --------->AHL20(2) <---------AHL20(2)  <----------DOF2         <---------AHL20(2)--------->AHL20(1) --------->AHL20(2)  --------->AHL20(2)  <---------DAG2   --------->CCA1(2)  <---------AHL20(2)  <xxx   aaaattaataatgtatttcatttttaattaaattagtatttgactttttaatttttaaagagatgaattaatttactatttaaattttatttctaatggc  19177400                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                              <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                       <---------------AtSPL8                                       --------------->AtSPL8                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <---------------AtSPL3                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->AHL20(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->ANAC55(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) >>>>>>>>>ARR2                  ----- ------TEIL       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          >>>>>>>>>ARR1            <---------- xxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         >>>>>>>>>ARR2            <---------AHL20(2) xxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          >>>>>>>>>ARR1        <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AHL20(2)           <------ZmHOX2a(1)    --------->ARR11(3) xxxxxxxxxxxsmallRNA(si3)--------->DAG2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         --------->AHL20(1) xxxxxxxxxxxxsmallRNA(si3)----------->GT1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------AHL20(1) xxxxxxxxxxxsmallRNA(si3)<---------TOE2(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ARR11(3) xxxxxxxxxxxsmallRNA(le3)<---------TOE1(3) ------->TEIL       <---------TOE1(2)   --------->YAB1----- xxxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------->AHL20(2) --------->AHL20(2)         <---------YAB1<-----   atacatatgtaattacttacaaaaaataaggttacatttaaaatgtacttcccaaataatatagtaggattgttttcatttctatgatatatttacattc  19177500         --------->AHL20(2)        --------->YAB1 --------->TOE1(2)   --------->AHL20(2)  --------->TOE2(2)        <----------ID1   --------->AHL20(1) --------->YAB1          ---------->DOF2  --------->YAB1     <---------YAB1          <---------ATHB12 ---->YAB1           <---------TOE2(3)   <---------ATHB12          ----------->GT1 -GT1--------->YAB1--------->YAB1      ------>MYB83               --------->DAG2 ------>GT1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           ---------->DOF2 --TEIL --------->AHL20(2)             ------>MYB46(1)      --------->AHL20(2)           <-----------GT1   gtaaaaataataaaaatacaattaacataagaaatagaaccaaatcaataaagccaagactataaaataaagtaaaaaacaattagcaaaattacaaaat  19177600                       <---------ARR11(3)                       --------->ARR11(3)                                                       -----                     <---------AHL20(2)                                                      --------               --------->ANAC58                                                              <-------               --------->ANAC58                                           --------->ANAC46--------->GLK1(2)          <---------WRKY38(1)                                     --------->AHL20(2)      --------->ARR11(3)          <---------WRKY12     --------->ARR11(3)                 ----------->TBP         <---------ARR11(3)         --------->WRKY18(1)   <---------ARR11(3)               <-----------TBP        --------->AHL20(2)    ---------->DOF2 --------->AHL20(2)               <----------DOF2    --------->ANAC46 --------->RVE1(1)   agaaaacaaaggtcaacaagaaataaatcttgaaatcttcatcaacacaaactctcttttctctccatatatatacccaaaacacaaaaaaaaatctaga  19177700                                                    ------>MYB83                                                    ------>MYB46(1)                                                  <---------MYB111(1)                                               <---------ALFIN1          <------------CBF                    <---------MYB55(2)        <---------AHL20(2)       --------->YAB1--------->AtMYB61                             <-------   ----------->GT1      <-------GAMYB         --------->MYB46(3)                             <------- <---------ANAC58      <---------MYB46(3)    ------>MYB83  --------->ZAT14              <------------ <---------ANAC58      ----------->GT1       ------>MYB46(1)      <------------------------ANAC81 ----->DOF2           ---------->ID1  *TSS  --------->ANAC46<---------ALFIN1            ------>ZmHOX2a(1) ->HSFB2a(2)          <---------TOE2(3) <-----------GT1<-----------GT1         ------>ZmHOX2a(1) --HSFB2a(2)  <---------YAB1<---------YAB1 --------->MYB46(3)    <----------DOF2  ------>ZmHOX2a(1)   aaggcttgaaaaaattgtcattttgtggttataaatgaaaataaacccaccaccaaataactccactctttatctctcttcctccttctcctataacttg  19177800                                                                 --------->ANAC58                                                                 --------->ANAC58                <---                                                             --------->ANAC46                    ----       --------->ANAC58                                      --------->ANAC55(2)                 ----       <---------ALFIN1                                      --------->ANAC55(1)                 <---       --------->ANAC46                                      --------->ANAC58                    ----       --------->ANAC58                                      <---------ANAC55(2)              <------     <---------ALFIN1         <---------ARR11(3)             --------->ANAC58                 <------ --ANAC58                 ---------->DOF2             --------->AHL20(1)            <------ZmHOX2a(2) --ANAC58          --------->GLK1(2)                  <---------AHL20(1)   <----------DOF2    <------ ---AGL15     ---------->DOF2 --------->ARR11(3)      <---------ARR11(3)   <---------DAG2 <---------GLK1(2)   caacttcccacaccaaaaaagattccatcaaaggtctctctctcttcataaaccaatattttcacgtaagaaacaaactttttccgatcaaagattgtgt  19177900                                                   <---------At4g35610                                                   --------->At4g35610                                                   <---------ZAT2                                                  ----------->RAV1(1)                                                <---------At4g35610                                                <---------ZAT2                                                --------->At4g35610                                                --------->ZAT2                                             --------->TGA2(2)                                            <-----------TGA1                                            <-----------HVH21                                            <<<<<<<<<<<AtbZIP1                                           <---------O2                                           --------->O2                                           <---------TGA2(1)                                           --------->TGA1a                                           --------->TGA2(1)                                           <---------TGA1a                                           --------->bZIP60(1)                                           <---------bZIP60(1)                                          <-----------STF1                                         <---------TGA2(2)                                        ----------->TGA1                                        ----------->HVH21                                      <------ZmHOX2a(2)                                      <---------At4g35610                        ----------->GT1------>ZmHOX2a(2)                               <------NtERF2                      ===============================bZIP_DOF                         ------>NtERF2                      ---------->DOF2 --------->At4g35610                            <---------DEAR3(1) ------ZAT14      --------->LBD16    <---------ARR14(2)                             --------->ATERF1(1) ----->ZAT14     <---------LBD16     --------->ARR11(3)                           --------->ETT(2) ----->At4g35610 --------->LBD16     --------->ARR14(2)                        ----------->TGA1 ------At4g35610<---------ANAC46     <---------AGP1--------->ZAT2            <---------ICU4 ----->ZAT18    --------->LBD16      <---------ARR11(3)        --------->YAB1--------->YAB1        -- ---ANAC46      <---------LBD16      <-----------ARR10        <---------YAB1--------->ICU4         <- ---ANAC58     <---------LBD16       --------->GLK1(2)      --------->YAB1  <---------YAB1        --- ---ANAC58    <---------LBD16       <------ZmHOX2a(1)  <---------ANAC46   --------->YAB1          ---   gcagagtcagaaattttcccggggaaaagaaaaatgcaggatctgacgtcagcagcagcgtattatcatcagtcgatgatgatgacgacggcgaaacaga  19178000                                                                                                    <            --------------->AGL15                                                                  <-            --------->HSFB2a(2)                      ------>MYB46(1)                               <-            <---------------AGL15                    ------>MYB83                                 ---            <---------HSFB2a(2)                     --------->MYB55(1)                            ---          -------->P                               <---------MYB46(2)                             <--      <---------ZAT6                               <---------MYB52(2)                             ===  --------->MYB46(3)                               <---------MYB59                                --- -------->P----------------->AGL1                  <---------MYB111(1)                            --- ------>MYB83                             --------->At5g28300                                     --- --------->MYB52(1)                       <-----------HVH21                              ----------->HVH21 ------>MYB46(1)                     ------>ZmHOX2a(1) --------->ZAT6               --------->GLK1(2) ------->AtMYB61                 --------->ZAT18   <---------MYB111(2)       <---------ICU4       === --------MYB111(1)               <---------ZAT18  --------->ANAC46 <---------MYB52(1)   <-----------HVH21 ------>DEAR3(2)            ---------->DOF2----------->HVH21  --------->GLK1(2) --------->YAB1    --- ------>MYB46(3)         --------->At4g35610      --------->ANAC55(2)    --------->REM1(1)   --------   accaaccagagttaccagaacaagaacagctaaagtgtcctcgctgtgactcacctaacactaaattctgttactacaacaattacaatctgtcacagcc  19178100                                           <---------ZAT18                                         --------->ATERF1(1)                                         <------NtERF2                     <---------LBD16    <----------DOF2                     <---------DEAR4(2)               <---------GLK1(1)         --    <---------DAG2                      <---------ORA47(2)         --------->MYB55(2)         <------ZmHOX2a(2) ---------MYB52(1)                     <---------DREB2C(2)         <---------MYB46(3)        <------- ----------HVH21                       --------->ALFIN1           <---------AtMYB61          -------- ----------TGA1                        <---------DEAR3(1)         <---------DEAR3(1)     --------->MYB52(1) ------>O2                        --------->MYB52(1)              --------->ALFIN1      ------->GAMYB ------>ANAC58               <---------ZAT14                     <-------GAMYB         --------->MYB46(3) -------O2                   --------->ZAT18                    <---------MYB46(3)     <---------MYB52(2) ==============bZIP_DOF      --------->ZAT14                    <---------DEAR3(2)     <---------MYB55(2) ------>ANAC58               <---------ZAT18 <----------DOF2   <---------At1g77200   ----------->RAV1(1) ------>ANAC46          <---------MYB52(1) --------->ABI4(2)   <---------DEAR3(1)   <----------ID1 <- ------>TGA1a        <------NtERF2---------->DOF2              <---------MYB46(3) --------->ANAC58 <- =============================================bZIP_DOF         <---------DREB2C(2)--------->ANAC58<-- ------>bZIP60(2)  <---------ETT(2) --------->DAG2           <-----------HVH21   --------->DAG2  ---- ->DEAR3(1)     <-----------RAV1(1)---------->DOF2          --------->ANAC46    ---------->DOF2------   ccgtcacttttgcaaaaactgtcgtcgttactggactaaaggcggtgctcttcgtaacatccccgtcggtggtggaactcggaaaagcaacaaacgatcc  19178200  Previous    Next  AGI:  At1g51700.1    Description:  ADOF1 (Arabidopsis dof zinc finger protein 1); DNA binding / transcription factor. Identical to Dof zinc finger protein DOF1.7 (DOF1.7) [Arabidopsis Thaliana] (GB:O82155); similar to ADOF2 (Arabidopsis dof zinc finger protein 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G21270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45729.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 19177738    to: 19178857    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version