Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->HSFB2a(2)                                                <---------HSFB2a(2)                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                              <-----------GT1                                    ----                                           <---------MYB46(3)                                <-------                                          <---------WOX13(1)                               --------->GLK1(2)                                         >>>>>>>>>ARR2                               --------->ALFIN1                                        --------->ATHB12                           <---------ANAC58     <----------DOF2                <----------DOF2                                <---------ANAC46 -------->DOF2                   --------->ARR11(3) --------->ZAT14                <---------ANAC58 -->YAB1                         <---------ARR11(3) <---------ZAT14               <-------TEIL   <--- --->GT1---------->DOF2 ---------->DOF2<---------YAB1                             <------------------   aaaaagcctttaaagactcttctggctaaagacaagttcttttgattgttacagaacagtgagaatagcataaaactaagcacatacgtggagaatcaat  19157600                                                                                              -------  <-----------HVH21                    --------->TOE1(2)                 ------->TEIL         <------ ----->ZAT14                          --------->YAB1                  <---------ANAC55(2)--------->ANAC58 --ICU4                       <---------YAB1                          --------->ANAC55(2)--------->ANAC58 ------ZAT14              --------->ANAC55(2)            <---------GLK1(2)              <---------ZAT18 -----TaNAC69(2)          --------->TOE2(3)  <---------KAN4(2)      --------->YAB1    <---------SPL7<   acactgtcagaagttgagagaagaccatacttaatattaaacatgagaatatacaaactgattttctgaatcatgtattttgaatcgcagtacgcatatt  19157700                                                                                                  <--                                                                                                 ----                                                                                              ------>NtERF2                                                                                             <-------                                                                                          --------->ANAC58                                   --------->MYB52(2)                                     --------->ANAC58                                   <---------MYB46(3)                                   --------->MYB52(1)                              <<<<<<<<<<AtSR1             ------>ZmHOX2a(1)         ------>MYB83-----                             --------->ANAC55(2)     <---------GLK1(1)              ------>MYB46(1) -->ARR14(2)            <----------DOF2            <------------------------ANAC81 ----------->RAV1(1) ---ARR14(2)            <---------DAG2      --------->AHL20(2)                   --------->MYB46(3) ---------TOE1(2)  <-----------HVH21        <---------AHL20(2) --------------------->WRI1 --------->ANAC46   tgcaggttagaccatctccaatgtcacttttacgcgtttgtttgatttaaattcgatttcctcttcttggtttatatcacaaaaccaacaaaacgacacc  19157800                                                      ---------->DOF2                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->ANAC46                                                 ------->GAMYB                                                 ----------->RAV1(1)                                                <---------MYB55(2)                                                --------->MYB46(3)                                               ------>MYB83                                               -------->P                                             --------->AtMYB61                  ---------->DOF2                                             <---------MYB111(1)             <----------DOF2                                            --------->DEAR3(2)              <---------ANAC58                                            --------->MYB46(3)              <---------ANAC58      <-- ---------->DOF2                         <---------ZAT14                 --------->LBD16          <-- -------ANAC46                           --------->ZAT14                --------->ANAC55(2)  -------- ----->LBD16               <-----------RAV1(2) ------>MYB46(1)          <---------ANAC58     -------- --ALFIN1          --------->MYB52(1)    <---------ZAT18                <---------ANAC58  ------>ZmHOX2a(1) ---->DEAR3(1)  --------->TOE2(3) --------->ZAT18--------->AtMYB61      <---------ANAC46------>ZmHOX2a(2)   gcgtaaagtctgaaaaaaacttaacagagccagaagtgcccagtgaaccaaccacacaaagtcacaaatggtttccgtgcttgaaagtgatcctcacgcg  19157900                                                               <---------AHL20(2)                                                              <---------AHL20(1)             <-------                                                              <---------AHL20(2)            <--------                                                              --------->AHL20(2)     <---------TOE2(3)                                                          --------->AHL20(2)         <---------TOE1(3)                   <---------DAG2                         <---------AHL20(2)         --------------->AtSPL8                   <----------DOF2                     <----------DOF2              <-----------GT1    --------->ANAC46    <-----------GT1         --------->AHL20(2)                  --------->MYB52(1) -------DAG2      <---------DAG2         <-----------GT1 --------->AHL20(2)         <---------DOF5.7(2) --------DOF2  <-----------GT1    ------------>CBF <-----------GT1             --------->ICU4<------- ->ANAC58   ----------->ARR10    <-----------GT1<---------AHL20(2)           --------->YAB1*TSS ->ANAC58<---------ANAC46--------->HSFB2a(2)   --------->AHL20(2)           --------->AHL20(2)   ctttacacatcgcgtagatacctttttctcgattttaacaattttgctatttatttccttttaattaattttctcaaaataaaaattaacgttccctttt  19158000     ------>ZmHOX2a(1)                                  ------>ZmHOX2a(2)     <----------DOF2     --------->HSFC1(2)         <---------YAB1 <---------ZAT18     --------->ANAC46             --------------------->WRI1 --DAG2              --------->ANAC58         <---------YAB1                                 <------- -DAG2               --------->ANAC58      <----------DOF2                             ----------->RAV1(1) ---DOF2    <---------ARR11(3)          <---------ARR11(3)              <---------ATHB12 <---------MYB52(2)   cagtgtcctttcaatttctttcgacgaaacttcatttctcaatttcttttgattttgatcgcttcgaagaacgaatcaatttaagcctgccacaaacaaa  19158100                      <---------------------WRI1                    --------->DEAR3(1)                 --------->ANAC58                 --------->ANAC58                 ----------->HVH21              ------->GAMYB              --------->TOE1(2)             <---------MYB52(2)             --------->ANAC58                                   <---------ICU4       <----------ID1------>NtERF2                             <---------YAB1       --------->ANAC46                                        <------ZmHOX2a(2)            <--------       --------->ANAC58                                       --------->ARR11(3)        <----------DOF2       --------->ANAC58                                       <---------ARR11(3)  <---------ATHB12 --MYB52(2)  --------->ANAC58                         <----------ID1        --------->YAB1 --------->AHL20(2)   ccctagaatacgacaacgcacgacgacgaagaagtcgaagaagactactactataaacgacgaagatcattacttcaatcttcaatcgagcttttaaatt  19158200                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                             ----------->GT1      <--                                                                            <---------ANAC46      ---                                                                           <---------LBD16        ---                                                                         <---------MYB52(1)      ----                                                                         --------->ARR14(2)      <---                                                                       <---------ANAC58         <----                                                                       <---------ANAC58         -----                                                                    --------->GLK1(2)          ------                                                                    <-----------GT1           <------                                                                    <---------ARR14(2)        <------                                                                  <---------HSFB2a(1)        --------                                                                  --------->HSFC1(2)     --------->ATERF1(1)                                                                  --------->HSFB2a(1)   <---------RAP2.6(3)                                                                  <---------HSFC1(2)    <---------SPL7                                                                <------ZmHOX2a(1)       <---------ATERF1(1)                                                              --------->LBD16--------->LBD16 --------    ------>ZmHOX2a(2)             --------->DAG2             --------->HSFB2a(2)        <-----------HVH21   <------ZmHOX2a(2)             ---------->DOF2             <---------HSFB2a(2)       --------->DEAR3(1)  <---------ARR14(2)           <---------HSFB2a(2)           <-----------RAV1(2)  ---------->DOF2<---  --------->ARR14(2)     <---------YAB1                    ------>NtERF2 <---------ARR14(2) <------NtERF2 -AHL20(2)            <----------DOF2                  ------->GAMYB--------->ARR14(2) --------->RAP2.6(2)   ttcagatcgtagaagaaaatcgaacttttgattccaaaagcgatgagaccgattcaatcgcctccaggagtttccgttccggtgaaaagccgtccccgtc  19158300        ========================HOX2a_HOX2a        ------>ZmHOX2a(2)      <---------ARR11(3)      --------->ARR11(3)    ------>ZmHOX2a(1) -------->ORA47(1)                                                                    <---------MYB46(3) ----->NtERF2                                                                         ------>NtERF2 ---------RAP2.6(3)                                                                   --------->ABI4(2) ---------SPL7                                                                 <---------ARR14(2) ------->DEAR3(1)                                                            --------->MYB55(2)    -- ----NtERF2  --------->TOE1(3)                                               <---------MYB46(3)   <-- ------>RAP2.3(1)                                                            --------->ABI4(2)   ---- ------>ATERF1(1)                                                           <---------AtMYB61    <--- -->NtERF2   <---------MYB59                                                --------->ALFIN1     <--- ------ATERF1(1)                                                          --------->LBD16<----------DOF2 -----DEAR3(1)                                                          <---------LBD16<------NtERF2 ---->DEAR3(1)                     <---------HSFC1(2)               ------>MYB83 <---------LBD16 <--- --->ATERF1(1)               --------->ANAC46                     <---------MYB46(2)<---------MYB52(1) -----HVH21  --------->TOE2(3)     --------->HSFC1(2)             <---------MYB111(2)<---------DEAR3(1) ---ATERF1(1)<---------DAG2---------->DOF2                ------>ZmHOX2a(1)<---------MYB52(1)    <--- ->ANAC46 <-----------GT1 ---------->CDC5        ------->TEIL     <---------MYB111(1)--------->ALFIN1 ->O2 <-----------ARR10  ------>ZmHOX2a(1)    <----------DOF2  <---------ALFIN1--------->ARR14(2)---- ------RAP2.3(1)        --------->TOE2(3)    --------------->AtSPL8 ------>MYB46(1)--------->LBD16<--   gccgtcctgatcttaccttaccgcttcctcaacgcgatgtttctctcgctgtacctcttcctctcccacctacttccggtggttccggtggctctagtgg  19158400      ------>NtERF2     --------->RAP2.3(2)     --------->DEAR3(1)     --------->RRTF1(3)     --------->RAP2.3(3)     <---------ANAC46    --------->ATERF1(1)    --------->RAP2.3(1)    --------->DEAR4(2)    <------NtERF2    xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->ORA47(2)   <---------ATERF1(1)   <------NtERF2   <---------RAP2.3(1)  ------>NtERF2   ------>NtERF2      ---------->ID1  --------->ANAC46  <---------DEAR3(1) ---->ZmHOX2a(2)   --------->SPL7 -------GLK1(1)   <---------ARR14(2)        --------->At4g35610                                    -- ----->ARR14(2)   --------->ARR14(2)        <---------At4g35610                                   <-- ------ARR11(3) --------->MYB55(2)        --------->MYB46(3)                            ------->GAMYB ------ARR14(2) <---------MYB46(3)      --------->MYB52(1)                            <-------------- ------AGP1 <-----------RAV1(1)     --------->ZAT6                           <---------ZAT6       --- --------ARR10<---------MYB52(1) ------->GAMYB                         <---------ARR14(2)  --------->ARR14(2) ----->ARR11(3)<---------AtMYB61--------->MYB46(3)           <---------ARR11(3)      --------->MYB52(1) -------At4g35610<---------SPL7 <---------MYB52(2)  ---------->DOF2    --------->ARR14(2)  <---------ARR14(2)   atctgcgccgtcttctggtggttcggcgtcttcaacgaacactaacagctccatagaagcgaagaactattcggatttagtgagaggtaaccgtatcgga  19158500  Previous    Next  AGI:  At1g51650.1    Description:  ATP synthase epsilon chain, mitochondrial. Identical to ATP synthase subunit epsilon, mitochondrial [Arabidopsis Thaliana] (GB:Q96253); similar to ATP synthase subunit epsilon, mitochondrial (GB:Q06450); contains InterPro domain ATPase, F1 complex, epsilon subunit, mitochondrial; (InterPro:IPR006721) Range:  from: 19156283    to: 19157597    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g51660.1    Description:  ATMKK4 (MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4); MAP kinase kinase/ kinase. Identical to Mitogen-activated protein kinase kinase 4 (MKK4) [Arabidopsis Thaliana] (GB:O80397); similar to ATMKK5 (MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5), kinase [Arabidopsis thaliana] (TAIR:AT3G21220.1); similar to double MYC-tagged mitogen activated protein kinase kinase 4 [synthetic construct] (GB:ABF55664.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/t Range:  from: 19157991    to: 19159615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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