Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ------------------------>ANAC81     <------MYB83                   <-----------GT1      --------->ANAC46                     <------     <------MYB46(1)                <---------AHL20(2)   --------->ANAC58                     ------- ------->YAB1                <---------AHL20(2)          --------->ANAC58 --------->DAG2 --------->ANAC46 ---->WOX13(1)              --------->AHL20(2)          ------------------------>ANAC81  --------->ANAC55(1) >ANAC58           <-------GAMYB --------->YAB1  <----------ID1     ---------->DOF2      --------->ANAC58 >ANAC58          <-----------RAV1(1)  <----------DOF2 --------->MYB52(1)---------->DOF2 --------->ANAC58   atgagattggtgtcttctctctgttgcacatttaatattaacttttgaaaaactacaaaacgaaacaaaacaaagaaaagcagacatttacacgaaatta  19155900                                                                     --------->HSFB2a(2)                                                                     --------->LBD16                                                                     ------>ZmHOX2a(1)                          --------->TOE2(3)                          <---------HSFB2a(2)           --------->ANAC46                                         <---------LBD16           --------->ANAC55(1)                            <---------LBD16      <---------ARR14(2)------->TEIL                     <---------ANAC58      --------->ARR14(2)-------->P                       <---------ANAC58 ---ATHB51 --------->ANAC58                              <---------ANAC46                        <--- -->ICU4   --------->ANAC58       --------->YAB1----------->GT1    ----------->RAV1(2)       ------>ZmHOX2a(1)   tgcagacatatacacgaaattcaatctacctgaaaatgagaataagttttgagtaaatttcgtggagactcctggaaataagtttgtttgttttcctatt  19156000                                                                                               ------                                                                                              <------                                          <---------AHL20(2)                                  <<<<<<<                                     <---------ARR11(3)                                       <<<<<<<                                <---------ATHB12                                      --------->ANAC46            <----------DOF2 <---------MYB59<---------YAB1                             --------->ANAC58    ------->TEIL            --------------->AGL15        <------MYB83                 --------->ANAC58    <-----------GT1        ----------------->AG   ---------->DOF2             <---------ARR14(2) --------->ANAC55(2)    <---------WOX13(1)--------->AHL20(2)                  --------->ARR14(2) ------AHL20(2)      <---------YAB1<---------TOE2(3)     <------MYB46(1)   <---------ANAC46 ---------   tttatgtaacttcgcttaaatttctaattgcctaatcaaggtattaaaatagcaaagcttggtttggctcagtcttcgcgtaaactccaagaaacaatca  19156100                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                        --------->MYB59                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                              <-------TEIL                                                                             --------->CCA1(2)                                                                            <---------ARR14(2)                  --------->ANAC46                                          --------->ARR14(2)                  --------->ANAC58                                         <---------HSFB2a(1) --->YAB1         --------->ANAC58                                         --------->HSFC1(2) ---ATHB12   <----------ID1                      --------->GLK1(1)         <---------HSFC1(2) <<ARR1 --------->AHL20(2)                       <---------GLK1(1)         --------->HSFB2a(1) <<ARR2--------->AHL20(2)             --------->DAG2         ---------->DOF2<---------GLK1(2) >WOX13(1) ---------->DOF2           ---------->DOF2     --------->At4g35610--------->ARR11(1)   taaaaacaaataaaaaagacaagaaaccaaaaaaaaaaaaaaagttgagagatttcagtagatgaaagttggatagaagattcgtgtagttagctactta  19156200               --------->AHL20(2)               <---------AHL20(2)              --------->AHL20(2)           --------->AHL20(2)          <---------AHL20(1)                                                                     ----          <---------AHL20(2)                                                              <----------DOF2          --------->AHL20(1)                                                             <---------HSFC1(2)       --------->AHL20(2)                                       --------->GLK1(2)        --------->HSFC1(2)     <---------MYB52(1)                                        <---------GLK1(2)    <---------HSFB2a(2)    ----------->GT1                                         --------->ANAC58        --------->HSFB2a(2)    <-------GAMYB             <---------ANAC46           <---------ZAT18   ---------->ID1--------->HSFB2a(1)    --------->At5g28300   <------------CBF     <------ZmHOX2a(1)--------->ARR14(2) *TSS  <---------HSFB2a(1)   <---------MYB46(3)  <<<<<<<<<<<<<<<<<LFY   <---------YAB1--------->ANAC58       <---------ANAC46   ----------->GT1 <---------ICU4  <---------ZAT14       --------->ZAT18  <-----------HVH21     -----   atgggccgttaaaatatttaataaggcccattgggtctaaactgtgttaggattactagggcacagaatcggtctctgtcccatttcgcgaactttctcc  19156300                                                                       <---------HSFB2a(2)                                                                    <---------MYB52(1)                                                                  <---------ANAC58                                                                  <---------ANAC58                                                               <---------ARR14(2)                                                              <-------GAMYB                                                              --------->ATERF1(1)                                                             <---------MYB46(3)        ----------->HVH21                                                             <---------DEAR3(2)    <------NtERF2                                                             <---------ATERF1(1)  --------->LBD16                                                             --------->ABI4(2)    ------>NtERF2                                                            <---------DEAR3(1)   --------->ALFIN1                                                           ------>NtERF2         <---------DEAR3(1)                                                           <------NtERF2        <------NtERF2                                                          ------------>AtMYB77  --------->ATERF1(1)          --------->TOE1(2)                               <---------RAP2.3(1)   <---------LBD16          <---------SPL7               ------>ZmHOX2a(2) <---------RRTF1(3)    <---------RAP2.3(1)         --------->MYB46(3)           <------ZmHOX2a(2)  <---------RAP2.3(3)   <---------DEAR4(2)         --------->DEAR3(2)          <---------ARR11(3)  <---------RAP2.3(2)  <---------DEAR3(1)       --------->MYB52(1)            <---------ARR14(2)  <---------RAP2.6(2) <---------At4g35610  --------->GLK1(2)                  --------->ARR14(2)  <---------RRTF1(2)  --------->At4g35610 <---------GLK1(2)          --------->ANAC58             <---------DEAR3(1) --------->ALFIN1 -->ZmHOX2a(1)              --------->ANAC58      <------NtERF2--------->ARR14(2)<---------ANAC46 ---->TOE2(3)          <----------ID1--------->ARR11(3) <---------LBD16--------->HSFB2a(2)   ttagaatcggaacggacgaagaaggaagacaaggaagaagatcggagatggcatcgaatgcggcggttccgttctggagagcggcggggatgacatatat  19156400                               <---------ARR14(2)                               --------->ARR14(2)                              <------ZmHOX2a(1)               <---------ARR11(3)                        <---------ANAC58                      --------->ARR11(3)                        <---------ANAC58               <---------At4g35610                        <---------ANAC46               --------->At4g35610       <-------TEIL                      <---------ARR11(3)            ---------->DOF2           --------->HSFC1(2)                      --------->ARR11(3)         --------->ANAC58             <---------HSFC1(2)                    <---------ARR14(2)           --------->ANAC58             <---------HSFB2a(1)                    --------->ARR14(2)         ----------->RAV1(1)    --------->ANAC46--------->ZAT14   atcgtattcaaacatctgtgcgaatatcgtgaggaactgtctcaaggagccacacaaagctgaagctcttactcgcgagaaggttcacttctctctctcc  19156500                                                                            <---------GLK1(2)                                                                            --------->ARR14(2)                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       --------->CCA1(2)                                                                      --------->AGP1                                                                      <---------AGP1                                                                      <---------ARR14(2)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                      --------->ARR14(2)                                                                     <---------CCA1(2)                                                                    ----------->ARR10                                                                 ------>ZmHOX2a(2)                                             <----------DOF2   <---------ARR11(3)                   --------->LBD16           ==================================HOX2a_HOX2a                  <---------HSFB2a(2)        =================================HOX2a_HOX2a                ----------->RAV1(1)          ===========================HOX2a_HOX2a             --------->ANAC58      <----------DOF2             <---------AGP1             --------->ANAC58     <---------DAG2               <---------ARR14(2)            <---------GLK1(1)  --------->ANAC58                --------->ARR14(2)           ---------->DOF2     --------->ANAC58          <-----------RAV1(1)<---------ARR14(2)   ----     ----------->HVH21       <--------P      ------>ZmHOX2a(1) --------->ARR11(3)       <---------ANAC58     <---------MYB46(3)  --------->TOE1(2)<------ZmHOX2a(2)   <---------CCA1(2)         <---------ANAC58   aaatgggctgatggaaagccccagaaacctggtaagccttttcgatcctttaatcgtcgatgttggatcttagatctggattcttcacgttcttgtgttc  19156600                                                                                                  ===                                                                                                  ---                                                ---------->DOF2                                 <----                                              ------>ZmHOX2a(1)                            --------->ARR14(2)                                             --------->TOE2(3)                             <---------ARR14(2)                                         --------->GLK1(1)                      ----------->RAV1(2)                                         <---------GLK1(1)                      --------->At4g35610                                   --------->GLK1(2)                   ----------->GT1  <---------HSFB2a(2)      --------->ATHB12           --------->KAN4(1)                   ---------->DOF2    --------->HSFB2a(2)     ------>ZmHOX2a(1)           <---------KAN4(1)              <---------ANAC46<---------At4g35610 ----->HSFB2a(2)                <---------KAN4(2)     --------->MYB52(1)      --------->YAB1    -----   tcgattcctgatttgtttttgagtaatttgttggaataatctgatttcctaaaagttatcggaattaagtggaaagtgaatcatctgcttctggatttga  19156700                                  <---------ARR14(2)                                  --------->ARR14(2)                          <---------At4g35610                       ------>ZmHOX2a(1) =============================HOX2a_HOX2a              --------->YAB1 --->ZmHOX2a(2)        <---------At4g35610 --------->At4g35610 -----ARR11(3)   <---------DAG2--------->HSFB2a(2)   <---------ARR11(3) ---->ARR11(3)<-----------GT1  <---------HSFB2a(2)   --------->ARR11(3)   tcttcgattttgcatttaacctttcctctgcttctggatttgatcagttcaatactatcttcatacaatgttgttatgtccaaattgttgaatttttcat  19156800  Previous    Next  AGI:  At1g51650.1    Description:  ATP synthase epsilon chain, mitochondrial. Identical to ATP synthase subunit epsilon, mitochondrial [Arabidopsis Thaliana] (GB:Q96253); similar to ATP synthase subunit epsilon, mitochondrial (GB:Q06450); contains InterPro domain ATPase, F1 complex, epsilon subunit, mitochondrial; (InterPro:IPR006721) Range:  from: 19156283    to: 19157597    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version