Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ANAC58                                                                     --------->ANAC58      --------->YAB1                                          ------>MYB83     <---------ATHB12                ------>MYB46(1)          ------>MYB46(1)      <---------ARR11(3)    --------->ANAC58                 ------>MYB83             -------->P  <---------YAB1    --------->ANAC58               <---------MYB59         <---------ANAC58  --------->CCA1(2)     --   --------->WOX13(1)           <-----------GT1            <---------ANAC58--------->YAB1    ------>ZmHOX2a(1)   gaaggcaatcaaaccattccaggcctaaaccatataacctacttcaccaaaattcgaattggcctaccaataagctatgatacaagaactatctcctact  19135600                                                                           --------->ANAC58            -------->P                                       <-----------GT1 --------->YAB1     <------NtERF2                                    --------->ICU4       --------->ANAC58 ---->ZmHOX2a(1)  --------->GLK1(1)             <---------LBD16   <------ZmHOX2a(2)        ----------   cctaggcagagtctaaccagatttcattagacaaaacatacctcatgttctcgggcaagattaatacgatcccagacaagcatagaaacagagacgaaga  19135700                                              --------->ARR14(2)                                             <------ZmHOX2a(1)               --------->MYB52(1)          <---------TOE2(2)          --------->ANAC58                 <---------TOE1(2)          --------->ANAC58              --------->ANAC46        ---------->DOF2                 --------->ANAC58     --------->ANAC58                   --------->ANAC58     --------->ANAC58             <---------ARR11(3)          <---------ARR14(2)                <----   ---------->DOF2                --------->ARR11(3)          --------->ARR14(2)           --------->ANAC58 --------->YAB1<---------ALFIN1  --------->YAB1              <---------CCA1(2)             --------->ANAC58 -------------->ANAC81          <---------TOE2(3)       <-----------GT1--------->MYB46(3)  --------->ANAC46   caatgaaaagcaaagccaaacgtctcggtcttctaagataatacgcaggattcaaatatttccatatcccataaccactaatcgatctacttctcgccat  19135800              <---------ATHB12             --------->ANAC58                                                                       -             --------->ANAC46                                                                     ---            ------>MYB46(1)                                                                      ----            ------>MYB83                                                    ---------->DOF2   <------          ------->GAMYB                             --------->AtLEC2   ----------->GT1   *TSS -------        --------->ANAC58                            --------->ANAC46 ---------->DOF2 <---------AHL20(2)        --------->ANAC58                --------->GLK1(1)       --------->ANAC58    --------->AHL20(2) -----CCA1(2)--------->ANAC58           <---------GLK1(1)       --------->ANAC58 <----------DOF2-----   ctctcttctcaacccactcaacaaaaacagagaccaattgagaaatcagtgtccatgaaacagagcaagacaaaagttaaaagcttttaaatttctgatc  19135900                                                       ===========================HOX2a_HOX2a                                                       ==============================HOX2a_HOX2a           --------->MYB52(1)                          ------>ZmHOX2a(2)        --------->ANAC58                              <------ZmHOX2a(2)        --------->ANAC58                              ===============================HOX2a_HOX2a    ----------->GT1                                   --------->ARR14(1) --------->DOF2                                       --------->CCA1(2) ------>LBD16                                         ============================HOX2a_HOX2a ----------->AGL15                                   <---------ARR14(2) ---ARR14(2)                                         --------->AGP1           <------ZmHOX2a(1) -->ARR14(2)                               ---------->DOF2        --------->MYB111(1) *TSS          - ->ZmHOX2a(2)       ----------->GT1---------->DOF2   --------->ARR14(2)    <------ZmHOX2a(1)   ------   cgaaaagagtaagaaaccgagagagaaataagtctctcaaagaacaaaagttatagatccgattttagtagttagaaggaggaagacgaagaaagaatta  19136000                                                   <---------ALFIN1                                                  <---------MYB52(1)                                                 --------->LBD16                                                 ------>NtERF2                                                --------->ANAC46                                           <---------ARR11(3)                                          <---------CCA1(2)        <---------DAG2                  --------->AHL20(2)        <----------DOF2                 <---------AHL20(2) <---------ANAC58  --------->ANAC58                  --------->AHL20(2)     <---------ANAC58     --------->AHL20(2)  --------->ANAC46                  <---------AHL20(2)<----------DOF2        --------->YAB1  --------->ANAC58            ----------->GT1  <---------LBD16              <---------YAB1 -------->MYB52(1)          ---------->DOF2--------->ARR11(3)    <---------AHL20(2)      --------->WOX13(1) --->AHL20(2)          ---------->DOF2<-----------TBP <---------DAG2  <----------DOF2--------->YAB1 <   aaaaacgaaactttacccaaaaaccaaaagaaaagtatttatttatatctccggcacttttgcttatttattcttttgatgataaaataatcaatcgagt  19136100                                                                                     <------MYB83                   ---------->ID1                                               <------MYB46(1)                   <---------CCA1(2)                                           <---------MYB46(3)         <---------ALFIN1                                                     <--------P   ----------        <------NtERF2                                                         <---------ANAC46        --------->MYB46(3)                                          <------MYB46(1)  <------MYB46(1)       >>>>>>>>>>>>>>>>>LFY                                         <------MYB83<------MYB83       <<<<<<<<<<<<<<<<<LFY                                        <---------AtMYB61<---------AtMYB61      --------->PCF2                                              <---------MYB52(1)--------->MYB59      --------->ANAC46 <----------DOF2<----------DOF2      <---------ANAC58  <---------MYB52(1) ----------DOF2 <-------TEIL    <---------GLK1(1)          <---------ANAC58<-----------RAV1(1)   ctctttagcccccactggttcgtctctttcttcgatttctctttctatctggtttccattttcgtctcgttggtgttctggtgggtttggtttgtctctg  19136200                       <---------DEAR3(2)                     <------MYB83                       <---------MYB46(3)             <---------ZAT6              --------->DOF5.7(2)                     ----------->GT1            <---------ANAC58                        <---------ANAC46            <---------ANAC46                       <---------MYB52(1)                    --------->ARR11(3)            <---------ANAC58                  --------->ARR14(2)                         <---------ARR11(3)   ==================================================================================================   <---------------AGL15            --------->At4g35610       <------MYB46(1)    <----------DOF2 >ID1  <-----------RAV1(1)     --------->YAB1 <---------ARR14(2)     <-----------------AGL1 <--------   ttcttctatttgtggcgttatccatcggttcaattgtcatcttcatcgtttccgtcgtgttatttggtgtttctcgtttgggtctttcgaacatctttca  19136300                              --------->ANAC55(1)                              ----------->GT1                              --------->ANAC58                           --------->ICU4                              --------->ANAC55(2)                     --------->ICU4            <---------REM1(1) --------->ANAC46                      <---------ANAC46     <---------DAG2           <---------ANAC55(2)                   <---------ANAC58     <----------DOF2    <---------MYB52(2)                          <---------ANAC58   --------------->AGL15--------->ANAC58                     <---------ANAC58 --------->ARR14(2)   <---------------AGL15--------->ANAC58                     <---------ANAC58 <---------ARR14(2) ==================MADS_MADS  --------->ANAC58               <---------ANAC46<------ZmHOX2a(1)      < --DOF2     <-----------RAV1(1)                              <---------ANAC55(1)        <---------AHL20(2)   ttcttctctttttggtgttgctccccacgaacaggtaacatcatcttaactcttatattggtttcgtgtgtcgtaatgaggaacctatatttcaatggtt  19136400                         <----------DOF2                        <---------ANAC58                    --------->GLK1(1)                    <---------GLK1(1)                       --------->YAB1                   --------->ARR14(2)                      --------->ICU4                   <---------ARR14(2)               <-------GAMYB               <---------LBD16                     --------->MYB52(2)        <----------DOF2 <---------ANAC58           <---------MYB46(3) ---------AtLEC2  <------ZmHOX2a(1)            <---------YAB1 <---------YAB1     ----------->GT1   ttggatgtcgctttgtttcaggatttgcttttgtttcttagggtttattttgtttgttgaaattataagtgagtttgtggaattggtataatatggttta  19136500  Previous    Next  AGI:  At1g51590.1    Description:  mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative. similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] (TAIR:AT3G21160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69574.1); similar to hypothetical protein OsJ_015393 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31910.1); similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] (GB:AAF16414.1); contains InterPro domain Glycoside hydrolase, family 47; (InterPro:IPR001382) Range:  from: 19131812    to: 19135986    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g51600.1    Description:  ZML2 (ZIM-LIKE 2); transcription factor. Identical to GATA transcription factor 25 (TIFY2A) [Arabidopsis Thaliana] (GB:Q8H1G0;GB:Q94AN8;GB:Q9C541); similar to ZML1 (ZIM-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G21175.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41658.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679); contains InterPro domain CCT (InterPro:IPR010402); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 19135889    to: 19139209    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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