Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->At4g35610                                                                      --------->ZAT2  <---------ARR14(3)                                                                      <---------ZAT2  --------->ARR14(3)       ---------->DOF2                        --------->ANAC58        <---------At4g35610         ---     --------->ANAC58                         --------->ANAC58  <---------ANAC46      --------->ARR11(3)     --------->ANAC58   --------->AtLEC2 ---------->DOF2      <---------ZAT14         <---------ARR11(3) --------->ANAC58 <------MYB83        --------->ANAC58        --------->ZAT18         <---------ARR14(2) --------->ANAC58 <------MYB46(1)     --------->ANAC58        --------->ZAT14         --------->ARR14(2) --------->ANAC46<---------AtMYB61   --------->DAG2     --------->GLK1(2)   ---------->DOF2  <------- ----->CCA1(2)  <--------P          ---------->DOF2 --------->YAB1 ---------->DOF2  ----------->ARR10   tagaagcaagaaagaagagttggtccatgaagatgaagaaaagcaaagaagcaatgagaatttgtgcagtgaagctgagaaagaagaagatattgatgaa  19118800                                                    <-------MYC3                                                    ------->MYC3                                                    <-------MYC2                                                    ------->MYC2                                                    <-------MYC4                                                    ------->MYC4                                                   <---------TGA1a                                                   <--------ABF1                                                   --------->ANAC55(2)                                                   <---------ANAC55(2)                                                   ====================MYC_MYB                                                   --------->TGA1a                                                   --------->O2                                         --------->ZAT2                                         --------->At4g35610                       --------->YAB1                                         <---------At4g35610                       <---------ICU4                                         <---------ZAT2       <---------MYB46(3)   <--------ATHB1               <---------ANAC58       ---------->DOF2        <---------TOE2(3)     --------->ATHB12           ---------->DOF2 <------ZmHOX2a(1)       <---------O2<-------GAMYB      --------->ICU4 ------>ATHB12 <---------ANAC58       =======================bZIP_DOF             <---------YAB1 --YAB1    ==================================================bZIP_DOF             <---------ATHB12   agattgaaacagagaaagcttgctatagaggagatagcattgaagctggagacacgtgttatggaggttgagaagagtttgacaatgattagaaaatgga  19118900                                                                                                   <-                                                                                                 <---                                                                                                 <---                                                                                           ------>ZmHOX2a(2)                                                                                           ==========                                                                                          --------->GLK1(1)                                                                                          <---------GLK1(1)                                                                                          <------ZmHOX2a(2)                                --------->At4g35610                                       ===========                            <---------ARR14(2)                                           <---------ARR14(2)                    --------->YAB1                                  <---------ICU4       --------->ARR14(2)                  ------>MYB46(1)                                   -------->HAHB4       <---------ARR11(3)                  ------>MYB83  <---------At4g35610                 --------->YAB1       --------->ARR11(3)                 --------->WOX13(1)        <-----------GT1         --------->ICU4        <---------AGP1         -------->P<---------ATHB12  --------->ANAC55(2)          <---------TOE2(3)      <---------ARR14(3)     --------->ANAC58       --------->GLK1(2)                    --------->YAB1          --------->GLK1(2)     --------->ANAC58       --------->ARR14(2)                 <---------YAB1           <------ZmHOX2a(1)   aaaccagaggcaaccagaccaatcatagagtttctgcttaagtattaacaaattgtgtcttaactattaatgatcagaaatttttcaagaggatctctta  19119000       --------->ANAC46       --------->YAB1   <---------MYB52(2)                                                       <---------ANAC58 -----ZmHOX2a(1)                                                            <---------ANAC58 ------TOE1(3)                                                              <---------ANAC46 ------TOE2(3)                           <---------ARR11(3)            <-----------RAV1(1) =====HOX2a_HOX2a      --------->ICU4    --------->ARR11(3)       --------->ANAC55(2)               - =====HOX2a_HOX2a   --------->ICU4  --------->ALFIN1              <---------ANAC55(2)              <-   aggaaacaaacacaacaatgtcacaattagtaatctatgtggagaacttatcagacacaaggcttattatgtattgttgcgtagagaaatgtgtttgaat  19119100                                   <------MYB83                                   <------MYB46(1)                                        --------->ATHB12                              <------MYB83                                               <---------AHL20(2)                              <------MYB46(1)<---------PCF5                              <---------YAB1                             <---------AtMYB61  <---------ALFIN1          --------->AHL20(2)                         <------MYB83       --------->WRKY38(1)          --------->AHL20(2)<---------                         <------MYB46(1) <---------ANAC58        <------MYB46(1)        <-----------TBP                         <---------MYB46(3)--------->ALFIN1      <---------MYB46(3) <------MYB46(1)                        <---------AtMYB61<---------ANAC46        <------MYB83 <---------AHL20(1)                     <-----------RAV1(1) <---------ANAC58       <---------AtMYB61   <------MYB83                <---------AHL20(2)--------->MYB59               --------->MYB59<---------AHL20(2)               --------->AHL20(2) <---------AtMYB61     <---------AHL20(2)<---------AHL20(2) -------->WRKY18(1)  --------->ALFIN1   <---------MYB46(3) <---------TOE2(3)  --------->AHL20(2) -------ZAP1  <---------YAB1 --------->MYB59--------->ZAT18<---------TOE1(3)  <---------AHL20(2)   cggtcaattttggtttattatatgtgttggtttggtttggtttgggtggaccacttaatttatggtttggttcgatttaattaatttggtttttattggt  19119200                                  ------>ZmHOX2a(2)                                 --------->At4g35610                                 --------->CCA1(2)                                --------->ARR14(2)                                --------->AGP1                                <---------AGP1                                <---------ARR14(2)                                --------->ARR14(3)                                --------->ARR11(3)                                <---------ARR11(3)                                <---------ARR14(3)                 <---------ARR11(3)                 --------->ARR14(2)                 <---------ARR14(2)                 --------->ARR11(3)         ---------->DOF2     *TSS<------ZmHOX2a(2)                                       ----------->GT1     <---------DEAR3(1)    <------ZmHOX2a(2)       <----------DOF2                    ---------->DOF2  ----------->TGA1       --------->GLK1(1)        <---------ANAC58                  --------->AtMYB61  ----------->HVH21 <---------LBD16----------->HVH21                             <----------ID1    <- ---CBF--------->At5g28300--------->ARR11(3)      <---------ANAC58     <-----------HVH21--------->DAG2   ttctctgacggtgaagcagtatctcggagatcaagatctgacattgttatgtgcttgaattcttcatcaagctcgtcagaaaaacaccaaaaggtttcaa  19119300                                                                                            <------MYB83                                                                             <---------At4g35610   <-                                                                             --------->At4g35610 <---                                                                          <------ZmHOX2a(1) <------MYB46(1)                   --------->TOE1(3)                                    --------->ANAC58   <---------AtMYB61           <---------ANAC58                                             --------->ANAC58  <--------P           <---------ANAC58                                      --------->CCA1(2)     <---------HSFB2a(2)           ----------->GT1                                      --------->ARR11(3)     --------->HSFB2a(2)           <---------ANAC46                                     <---------ARR14(2)    <---------ANAC55(2)          <-------TEIL  ---------->DOF2                         --------->ARR11(1)   <---------LBD16< --------AHL20(2)  --------->TOE2(3)  <---------TOE2(3)       ----------->ARR10    <---------SPL7<---   atttatctgaaattcgtgaaaccctaaaaagggttatgtcaaggtagaagagacagaacaaagatagatatggtaaggaagcagaagtacgggaaggtag  19119400                                                                                         ------>NtERF2                                                                                         --------->LBD16                                                                                        --------->ANAC46                                                                                        --------->DEAR3(1)                                                                                ------>NtERF2                                                                                --------->LBD16                                                                                <------NtERF2                                                                               --------->ANAC46                                                                               --------->ANAC58                                                                               --------->RAP2.3(3)                                                                               --------->DEAR3(1)                                                                               --------->RRTF1(2)                                                                               --------->RRTF1(3)                                                                               --------->RAP2.3(2)                                                                               --------->ANAC58                                                                               --------->RAP2.6(2)                                                                              --------->RRTF1(1)      <---------ANAC46                                                        --------->RAP2.3(1)      <---------ANAC58                                                       --------->LBD16      <---------ANAC58            --------->ATHB12                           <---------ATERF1(1)     --------->MYB52(2)     ------->GAMYB                                    ------>NtERF2<---------LBD16 <------MYB46(1)          --------->MYB52(1)                                 --------->At4g35610 <------MYB83           --------->MYB46(3)                                  --------->ANAC46 <---------MYB46(3)  --------->HSFB2a(2)                                    --------->DEAR3(1)     -- -------P <---------AtLEC2-------->P     <---------RAP2.6(3)                <---------ALFIN1     <--- ------ZAT6   <---------ZAT18--------->LBD16<----------DOF2               <---------ATERF1(1) <------ ---------AtMYB61    <---------HSFB2a(2) ------>NtERF2             <---------GLK1(2)   <---------LBD16 --------RAV1(1)  <----------DOF2 <---------ICU4         --------->REM1(1)------>ZmHOX2a(1) ---------   tgttggtttcttgcatcgcgcttctagcaaccggactcattgccgactttctctgggctacttctcatcgattctcctccgccgcaatctccgccggatt  19119500                                       --------->At4g35610                                       <---------ZAT2                                       <---------At4g35610                      --------->At4g35610                                       --------->O2                     <------ZmHOX2a(2)                                 ------>ZmHOX2a(1)                     <---------ARR11(3)                                 ==========================HOX2a_HOX2a --------->ARR11(3)                                <---------ANAC58                --------->AHL20(2)                                <---------ANAC58                <---------YAB1 <---------ARR11(3) ------->ZAT6         --------->At5g28300           ------>ZmHOX2a(2)  <---------AGP1 ------ARR11(3)   <---------ALFIN1     ----------->GT1 <---------MYB52(1)------>ZmHOX2a(2) ---GLK1(2)      --------->MYB46(3)  <-----------RAV1(2)        <---------AHL20(2) >LBD16         -------->P     ----------->RAV1(2) <---------At4g35610<---------CCA1(2)         -----   atctctaccttcttcacttaccaccgtaatcgttcctggccaggtgaattgtgatctgttattgatataattagatctcaacatctgaatttagcttcaa  19119600                                           <---------ZAT6                                         <---------ANAC58                                         <---------ANAC46                           ---------->DOF2                                         <---------ANAC58                <------ZmHOX2a(1)        <-----------GT1               <----------DOF2                    <---------------------WRI1     <---------ICU4                  <---------ANAC46              <----------DOF2<-------TEIL   <--- <---------YAB1                      <---------ANAC58           --------------->AGL15      >>>>>>>>>TBF1 ----->DOF2                          <---------ANAC58        <-----------GT1     --------->CCA1(2)   aagatgatttttacttcaatgttatacctagtttcaattgcttgagtgttaagttgctatattttactggttttaggagaaagatacaaagaagaagaag  19119700  Previous    Next  AGI:  At1g51538.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18510.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68396.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 19116851    to: 19118941    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g51540.1    Description:  similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G27220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41666.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 19119229    to: 19121202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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