Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ZAT14              --------->ANAC58                     --------->DAG2      --------->ICU4                              ---------->DOF2  <---------ZAT14                             <---------AHL20(2)     --------->ZAT14  <---------ZAT18            --------->ALFIN1 --------->AHL20(2)   --------->ANAC46        --------->ZAT2  --------->ZAT18            ----------->GT1 --------->AHL20(1)    XXXXXXXXXXXXXXXXXXXXX>MIR840   ---  --------->ZAT14   --------->ATHB12         <---------AHL20(2)  --------->ZAT6            --------->At4g35610 --->AHL20(2) --------->ANAC58               --------->AHL20(2)<-----------GT1             <---------At4g35610 >AGL15       --------->ANAC46         --------->TOE2(3) ----------->GT1                   <---------ZAT2   aatgtgcacttattcaacgcattgatttgaagtgtgactagcctaaatttaataaagtatagtatttacactgaagaaacagaactaaaacagagctgaa  19116500                                                                                              -------                                                                                          <---------WRKY18(1)                                                                                          <----------                                                    --------->MYB46(3)                   --------->WRKY12                                                <---------MYB59                          ----------->HVH21                     ------->GAMYB            --------->SPL7                        --------->AHL20(2)         <---------YAB1              <---------KAN4(2) --------->ANAC58             <---------AHL20(2) -------->GT1      ----------->RAV1(2)  <-----------GT1--------->ANAC58          <----------DOF2   tagagaaaactattagagtccaactgaaccaagttatggaataaaccggaccgaatcacccaaatgctattctcttcggtttacttttaatttgaccggt  19116600                                                  <----------DOF2                                           <---------YAB1                                         <---------ICU4                     ----------------->AGL2                                         --------->YAB1                     ----------------->AGL3                                ------->MYC3     --------->TOE2(3)          <-----------------AGL3                         <-------GAMYB   -------->HAHB4                   <-----------GT1                        ----------->GT1 <---------ATHB51             <---------ANAC46                   <------------CBF  --------->AHL20(2)           <----------DOF2                --------------->AGL15<---------AHL20(2)     <---------AHL20(2)    ---------->DOF2                ------------>CBF<-------MYC3--------->YAB1 --------->AHL20(2)--------------->AGL15 ---->GT1       ==============================================================================MADS_MADS -GT1----------->GT1   <---------TOE2(3)--------->ICU4     <---------AHL20(2)<---------------AGL15   taagacatggttagattactcaattggggttaaacgtgtttaattatgatacctttaactattaatttctttcgagtaaccatataaagaagttgttcca  19116700                                                                                                <----                                                                                                -----                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                             --------                                                                                             --------                      --------->ARR14(2)                                                     <-------             <----------DOF2                                                                <--------           <---------YAB1                                                                 --------->HSFC1(1)          --------->ARR11(3)                                                              --------->HSFB2a(2)          <---------ARR11(3)----------->RAV1(1)                                           <---------HSFB2a(2)        --------->ICU4<---------ARR14(2)                    ---------->DOF2       <---------AHL20(2)    ------>NtERF2     ------->TEIL                       <---------TOE2(3)   ------------>CBF<-------   --------->DEAR3(1)<---------CCA1(2)       ----------->HVH21     --------->ANAC46<-----------GT1   ttccagcgccattatctttctctgtatctgcaacatagttttgtgatttgacatttgttaagaaaagacacaaaacttgtccaatttatcttctagatct  19116800  --------->AHL20(2)  <---------AHL20(2) -----HSFB2a(2) ---->HSFB2a(2) >ZmHOX2a(2) --AGP1                     <----------DOF2                              <---------ANAC46 ->ARR14(2)          <----------DOF2                                     <---------ANAC58 ->ARR11(3)          <---------DAG2                        --------->ANAC58 --ARR11(3)     <----------DOF2        <---------At4g35610 --------->ANAC58 --------->ATHB12 <------- -CCA1(2)   --------->DAG2 <---------ANAC58        <---------WOX13(1)    <---------ANAC58    -------- --ARR14(2)---------->DOF2 <---------ANAC58     <---------YAB1---------->DOF2 <---------WOX13(1)   cgaaataaatacaaaaagctttcctttttgctttcatcttctgctacttgatgatggattcaagtaaagagagtagcttgattgaaacccattttctaaa  19116900                                              --------->DEAR3(1)                                         <-----------TGA1                                        --------->ANAC46                                        --------->O2                                        --------->bZIP60(2)                                     <----         --------->TOE2(3)  <---------At4g35610                                             <--------        --------->MYB46(3)  --------->At4g35610                                             ---------      <-----------GT1   <---------REM1(1)<-----------HVH21            <---------MYB59     <------ZmHOX2a(1) --HSFB2a(2)      <-----------RAV1(1)  ------>ZmHOX2a(1)        <---------At4g35610    <---------HSFB2a(2) ->HSFB2a(2)    --------->YAB1  <-----------ARR10               --------->At4g35610    --------->HSFB2a(2)   accctatgtaacctccattgatggtgctgtagcagagcttcctcgtcaccgtctctctgtttcttcatcagacctaaatgagtcgttttctaggatttct  19117000                                                              --------->ANAC58                      ------->GAMYB                           --------->ANAC46                    --------->ANAC58                          --------->ANAC58                    --------->ANAC58         --------->AHL20(2)     <---------------AGL15                --------->ANAC46             <---------AHL20(2)  ------->TEIL               --------->ZAT14         ----------->GT1      <---------AtLEC2      --------->TOE1(2)               --------->At4g35610<---------ICU4        <----------DOF2          --------->ZAT2 ------DOF2    <---------ZAT14    --------->YAB1      <---------HSFB2a(1)       --------->GLK1(2) -GLK1(1)      --------->ZAT18    --------->ATHB12    --------->HSFC1(2)       --------->DAG2       < >GLK1(1)<---------AtMYB61       <---------ATHB12     <---------HSFC1(2)      ---------->DOF2 <------   ttcaatgggttttggtctgcacaacccaatttcaaatcatgggctaaaaaaatggaagctttgcacgaacccatttggagaaaagctgggatttttgagg  19117100                                                                               <---------ARR14(2)                                                                               <---------ARR11(1)                            --------->ICU4                                     <-----------ARR10                        --------->LBD16                                        <---------ARR11(3)                       ----------->GT1                                         --------->ARR14(2)                       --------->ANAC55(2)                                    ------>MYB46(1)       -                    <---------ARR14(2)   <---------ANAC58                     ------>MYB83        <--        <------NtERF2  <---------ANAC55(2)                                    <---------CCA1(2)   <-- ---------->DOF2    --------->GLK1(2)    <---------ANAC58                     <---------ARR14(1)  <-- ---------ATHB12    --------->ARR14(2)  XXXXXXXXXXXXXXXXXXXX>MIR773   ------>ZmHOX2a(1)       <------ ---TOE2(3)--------------->AtSPL8    <----------DOF2                <---------ANAC46   ------>ZmHOX2a(1)   caataaaggcatcgatgtacaaaatccgtaaaaatcagtctttgcttctagctcttgttgagaaatggtgtcctgaaaccaaatctttcctcttcccttg  19117200          --------->DOF5.7(2)         --------->TOE2(3)         --------->YAB1      --------->MYB52(1)   --------->ANAC58         <---------ANAC58   --------->ANAC58         <---------ANAC58                                       --------->At4g35610 -------->ALFIN1       <---------ARR14(2)                                          <---------At4g35610 -------ANAC58         --------->ARR14(2)                                  <----------DOF2         -- -------ANAC46        <------ZmHOX2a(1) <---------TOE2(3)              ---------->ID1              <- -------ANAC58      <---------TOE2(3)   <---------TOE1(3)            <-----------GT1      --------->CCA1(2) ---MYB52(1)<---------DOF5.7(2)    <----------DOF2             ------>ZmHOX2a(1)---------->DOF2   <--   gggtgaagcaacgataacgcttgaggatgtgcttgtgcttttagggttttctgttcagggttctcctgtttttgcccctttagaaagctcagagatgaga  19117300          --------->GLK1(2)          <---------ARR14(2)   --------->LBD16  <---------ANAC46  <---------ANAC55(2)  <---------ANAC58  <---------ANAC58                                                                     <---------ANAC46 ------->GLK1(2)             ----------->GT1             <----------ID1          <----------DOF2 --------ARR14(2)        --------->ATHB12    <------ZmHOX2a(1)              <---------ANAC58 -------GLK1(2)   ---------->DOF2         <-----------RAV1(2)               <---------ANAC58   gattccgtagagaaactggagaaagctagattggagaatagaggccaggatgggctagtgagacaaaacttatgggtttcgagcttcttgggtagaggtg  19117400  Previous    Next  AGI:  At1g51538.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18510.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68396.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 19116851    to: 19118941    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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