Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <------------CBF                                                                  <------ZmHOX2a(1)                <-                                                                 <---------YAB1       ---------------  <---------MYB46(3)        <---------ANAC46               --------->AHL20(2)         <-------------- -----MYB46(1)              <---------ANAC58               <---------AHL20(1)         <---------HSFB2a(2) -----MYB83                 <---------ANAC58       <---------GLK1(1)   <---------TOE2(3)----------->TBP -------AtMYB61    <----------DOF2      --------->YAB1     --------->AHL20(1)        ================ ------RAV1(1)   <------------------------ANAC81   --------->GLK1(1)<---------WOX13(1)--------->HSFB2a(2) ---TOE2(3)   <----------DOF2        <----------DOF2       <---------AHL20(2)        <---------------   ttggtgtttgagttttcttttcttttgtttgtgtgttttctttcatatttgggatttctattttattaggattgatgttacaacggttctataaatcgaa  19098200                                                       ---------->DOF2                      <--------                       <---------AHL20(2)            --------------->AGL15                  ---------                  --------->ICU4                     <---------------AGL15          --------->ARR14(2)      <-----------RAV1(1)                           ----------------->AGL2          <---------ARR14(2)    <----------DOF2<--------HAHB4                   ----------------->AG           <---------GLK1(1)   <---------ANAC58<---------ICU4                   ----------------->AGL1         --------->GLK1(1)   <---------ANAC58--------->YAB1              --------->AHL20(2)     ------------>CBF  --------->LBD16 ---------DOF2    <---------YAB1               --------->YAB1        --------->TOE2(3)<---------LBD16 >AGL15         --------->YAB1                ----------->TBP     <---------ICU4  ---------->DOF2 -AGL15    <---------ANAC46                   <---------ATHB12   --------->ICU4 --------->LBD16 ====================================================================MADS_MADS --------->ANAC46    <- --AGL3  <---------ANAC46                 ------------>CBF  ----------->GT1   <---------LBD16  <-----   actttgctttgttgtggataatcattttttttttttttggataaaccaataaaaaccaaaagaggtaattatctcaattacccgtaaatccggacatctt  19098300                                                                                  --------->TOE2(3)                                                                                  <-----------HVH21                                                                                 --------->ANAC55(2)                                       --------->TOE2(3)                         <---------ANAC46                                    --------->KAN4(2)                            <---------ANAC55(2)                                   <---------GLK1(1)                             --------->ANAC58                                  --------->ARR11(3)           <----------DOF2   <---------bZIP60(1)      --------->MYB52(1)          --------->ARR14(2)          <---------ANAC58   --------->bZIP60(1) -ARR11(3)                        <---------ARR14(2)          <---------ANAC58   --------->ANAC58 >ARR11(3)            --------->ARR11(3)                  <----------DOF2     <---------MYB52(1) --------TOE2(3)      <---------ARR11(3)                 --------->TOE2(3)   <-----------HVH21   ---- -----DOF2  <----------DOF2------------>CBF        <---------ICU4  --------------->AtSPL8      ------   taagaattcaacggctttgtgaaagatttgtcaatggatattcttagaattcaacattacctttgctttgttgtacttctgttacgtcaaaccccttata  19098400                                  <---------ICU4                            --------->YAB1                               ---------->DOF2                           <---------YAB1      ---------->DOF2       ---------->DOF2                         --------->YAB1   <---------At4g35610   --------->ANAC46                         <---------ICU4   --------->LBD16       --------->ANAC58               <-----                      --------->YAB1      --------->At4g35610   ----------->GT1                ------                      ------->GAMYB      --------->ANAC46       --------->ANAC58             --------                     --------->MYB46(3) --------->MYB46(3)   --------->ARR14(2)           ---------->DOF2 <-----------GT1    -------->P   <---------AHL20(2)          <---------ARR14(2)         <---------HSFB2a(2) ------->TBP       --------->WOX13(1)<-----------GT1       --------->ANAC58         --------->GLK1(1) ----->TBP     --------->WOX13(1)--------->AHL20(2)        --------->ANAC58      ------------>CBF   tataaacccctccaagttaatcaaccatcatcatattaattacccgctgaaaagctccatcaagaaacgcaaaaagaaagcatggcaattccaaaagctc  19098500                        <----------DOF2                   <---------ANAC58     <------ZmHOX2a(1)                  ---------->ID1     <---------HSFB2a(2)              <------------CBF       --------->HSFB2a(2)             -------->ATHB1          <---------LBD16             --------->YAB1      <---------MYB52(1)             --------->ATHB12   <---------RAP2.6(3)             <---------ICU4    <---------ANAC58                                             ---------    <----------DOF2<---------ANAC58 <---------ANAC46                                       <--------- ----ZAT18  <---------ATHB12   <---------ANAC58 --------->DAG2                         --------->At4g35610 --->ZAT18  --------->ICU4    ----------------->AGL1  ------------>CBF                 <---------At4g35610 ->At4g35610<---------YAB1  <-----------GT1    ---------->DOF2            ---------->DOF2------->GAMYB   actactctttagccatcattgtcgttctttttgccgtttcgaggagccaaaaagtatgcaatccagaatgcaaggccaaagaacccttcaactgcgacaa  19098600                                                    <---------MYB111(2)                                                   <---------ZAT2                           <--------                                            <-----------RAV1(1)                           --------->ATHB12                                      <-----------GT1 -------->P                         <---------YAB1                                --------->AHL20(2) <---------At4g35610                   --------->ICU4                                <---------AHL20(2) --------->ZAT2              <---------ARR11(3)                      <---------GLK1(1)  <----------DOF2                       --------->ARR11(3) -->RAV1(1)           --------->GLK1(1)  <---------DAG2            <---------TOE1(2)--------->ANAC46 -ID1        ------->GAMYB     --------->AHL20(2)  --------->At4g35610        <---------CCA1(2)   aactcttgcattcaaccgaaatggatttcccaaaaaaattttacttttggtgcagctacctctgcataccaggtttacatatatcttcgccatgatagat  19098700                                                                                              -------                                                                                              <------                                                                                              <------                                                                                           ----------                                                                                     <---------At4g35610       --------->ATHB12                     ------>ZmHOX2a(1)                       ----------->RAV1(1)     <---------WOX13(1)         <---------ARR14(2)          <----------DOF2       <-------TEIL------- -WOX13(1)                      --------->ARR14(2) <---------ARR11(3)            --------->ALFIN1   -   ttaggggattgatttctagctataacattttccatatactttcttccttacaatatccaacgctttgttctatcaggttgaaggtgcagcacatagagca  19098800                                                              <---------AHL20(2)                                                              <---------ICU4                                  <-----------HVH21          --------->AHL20(2)                                 --------->ANAC46            <---------AHL20(2)                                 --------->bZIP60(2)      --------->AHL20(2) -->ZAT14                       --------->LBD16       <---------YAB1 ---ZAT18                  <---------GLK1(1)          <---------AHL20(2) ---ZAT14                  --------->GLK1(1)         <---------AHL20(1) >DOF2                    <---------ARR11(3)     <---------AHL20(2)   <-------TEIL------->TEIL -->ZAT18                 --------->ARR11(3)    --------->AHL20(2)   --------->AtLEC2 -------->MYB52(1)   --------->YAB1       --------->YAB1 <---------YAB1 ------->TEIL   ---------->DOF2   cttaatggatgggactatttcactcatagatatccaggtcataaacatcatttaatattattatttattacatgcatcttcatgtatgtaaaagtataaa  19098900                       <---------ARR14(2)                       --------->ARR11(3)                      <---------CCA1(2)                              --------->ARR11(3)             -                    --------->YAB1                                   <---------ARR11(3)            --                   <-------TEIL                                      <---------ARR14(3)            <-              --------->YAB1                                      <------ZmHOX2a(1)       <---------ARR11(3)             <-------TEIL                                         =================================HOX2a_HOX2a         --------->AHL20(1)                             =================HOX2a_HOX2a      --------->ARR11(3)         --------->ARR11(3)                             ------>ZmHOX2a(2)  <---------ANAC46  <-------         <---------ARR11(3)                            <------ZmHOX2a(2)   <---------ANAC58  <-------       <---------AHL20(1)         <---------YAB1       ==================HOX2a_HOX2a   <---------TOE2(2)       --------->AHL20(1)       ----------->GT1      <---------At4g35610   <---------ANAC58 ------>ZmHOX2a(2)      --------->AHL20(2)  <---------LBD16 ---------->DOF2     --------->ZAT14          <---------TOE1(2)   tataagaaatatatattcatattcatatctcggattgttatacagaaagagtttcagatcgcagtataggagaccttgcttgtaattcgtatgatcttta  19099000                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                                                            <---------GLK1(2)                                                                        ---------->DOF2                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                                      <---------AHL20(2)                      ------->TEIL                                --------->AHL20(2) ---------->GT1    <---------YAB1                                --------->AHL20(2) ------->DAG2   ----------->TGA1                                 <---------AHL20(1)                <- --------TOE2(3)<---------ATHB12                                 <---------AHL20(2)       --------->TOE2(3) ---DOF2    <---------YAB1                      --------->AHL20(2)<---------AHL20(2)      --------->TOE1(3) --------AGL15--------->WOX13(1)        <---------MYB46(3)   <---------AHL20(2)        <-----------GT1   taaggtgaaaggctatcaatgacgaatgtgtacatatggtgtttgttcaattttttcttagttttaatttaatttaaagatttttcatataaccttgaac  19099100  Previous    Next  AGI:  At1g51490.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G47600.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G51470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21976.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 19098556    to: 19101120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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