Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->ATHB51                      <---------ICU4            --------->YAB1                        <--------ATHB1            <---------ICU4                        --------->ATHB51            <--------HAHB4                       --------->AHL20(2)            -------->HAHB4                       <---------ATHB51            -------->ATHB1                  --------->TOE2(3)           <---------YAB1                  <---------ANAC55(1)           --------->ICU4                  ----------->GT1           <---------ATHB51                --------->ANAC58         --------->YAB1                    <---------ANAC46         <---------ICU4                    <---------ANAC55(2)        <---------ATHB51                   --------->ANAC55(2)                          <---------ATHB12        --------->ICU4                     --------->ANAC58                           --------->WOX13(1)        <---------AHL20(2)             <---------ANAC58          ----------->GT1  --------->YAB1        --------->AHL20(2)             <---------ANAC58      ------->TEIL    <---------ARR14(2)  ----------->GT1                   ---------->ID1-------->HAHB4<---------YAB1   <---------YAB1    -- ------>GLK1(2)        <---------TOE2(3)------>ZmHOX2a(1) <---------YAB1     --------->ARR14(2) <---- -------ARR14(2) <---------YAB1<----------DOF2   <---------AHL20(2)          <---------GLK1(2) ------   aatctagtaaataattattacgaataatgtaatcttttgttccttacgtaaataattgttatgaatgtgattaaaactggattttcataaatcaatattt  19097600                                                                                          --------->CCA1(2)                                                                    <---------ARR14(2) <-------TEIL                                                             ---------->DOF2          <--------P                                                          --------------->AGL15     <---------ANAC46                                                          <---------------AGL15    --------->MYB111(1)                                                          <---------HSFB2a(2)      --------->MYB59                                                          --------->HSFB2a(2)      --------->MYB46(2)                                                         ----------------->AGL1    --------->MYB111(2)                            <<<<<<<<<TBF1               --------->MYB52(1)        <---------MYB55(1)            <------------------------ANAC81    <---------ANAC46    --------->GLK1(1)<------MYB46(1) ------->ZAT6      <---------ANAC58      <-------TEIL<---------At4g35610 --------->ARR14(2)      ---- -----AHL20(2)     <---------ANAC58 --------->AHL20(2)  -------->P <---------GLK1(1)<------MYB83 ---- --->AHL20(2)    <-----------GT1 <----------DOF2     --------->At4g35610 <---------ARR14(2)<-------TEIL   aatactatgtgtttttttttttcttgtttcttcttcttttaaatacattgagcgtagctaccagaaagggtttccgatatggagttaggtagatacatca  19097700                                                                   <---------ARR11(3)                                                                   --------->ARR14(3)                                                                   --------->ARR11(3)                                                                   --------->GLK1(2)                                                           ------->TEIL                                                        --------->ANAC58                                                        --------->ANAC55(1)     <---------ANAC58                                                        --------->ANAC46        <---------ANAC58                                                        --------->ANAC58        --------->HSFB2a(1)                                                        <---------ANAC55(2)     <---------HSFB2a(1)                                    --------->AtMYB61   --------->ANAC55(2)   <-----------GT1         --------->At5g28300--------->YAB1            <---------DOF5.7(2)<---------ANAC46      <-----        ----------->GT1   ------->TEIL               <-------TEIL  <---------ARR14(3) --------->LBD16 ----->ANAC58          <---------ATHB12             --------->DOF5.7(2)  <---------ANAC58     <------ ----->ANAC58    <-----------GT1 <----------ID1     <-----------HVH21    <---------ANAC58     <------   ctcaatctgagggtaaattataccaatgaatcaaaacaccaaaactcttatcacgttcacgtatcacaaaatcttgggtgtaacgttccccaaattgctt  19097800                                                                               <----------DOF2                                                                              <---------ANAC58                                                                     <---------RAP2.6(3)                                                                     <-----------TGA1                                                                    --------->bZIP60(1)                                                                    <---------bZIP60(1)                                                                    <---------TGA2(1)                                                                    <---------ANAC46                                                                    --------->TGA2(1)        <---------LBD16                                          --------->ALFIN1          <------ZmHOX2a(1)       ------->TEIL                                           <---------DEAR3(1)          --------->ANAC46     <---------ZAT14                  <----------DOF2  <---------ANAC58       <---------ANAC46    ----------->HVH21         <-----------RAV1(1)      <---------ANAC58       <---------ANAC58 ------  <---------ANAC46           --------->ARR11(3)      <---------YAB1<------NtERF2         --------->LBD16 -----DOF2                <-----------RAV1(2)        <---------TOE2(3)   <-----------RAV1(1)   <----- ---ANAC58   <--------P   ================RAV  <---------YAB1--------->At4g35610        <---------HSFB2a(2) ---ANAC58--------->LBD16<------ZmHOX2a(2)  <------ZmHOX2a(2)<---------At4g35610        --------->HSFB2a(2)   aatggtgtgaaccgggttgaaaactggatcagatgttggactttggatcaccattaagcttgcagcggtgtcgtcatgttgcttcaagttccaggacatc  19097900                                                      ------>MYB46(1)                                                      ------>MYB83            ----------->RAV1(1)                     <---------ALFIN1         --------->ALFIN1                           --------->AtMYB61   --------->ZAT2                         --------->At4g35610             <------------CBF  --------->ANAC58                        <---------At4g35610       <---------ALFIN1  --------->ANAC46                        --------->ZAT2     --------->At4g35610  --------->ANAC58          <----------DOF2    <-----------HVH21    --------->AtMYB61 --->At4g35610 <---------ARR11(3)         ----------->RAV1(2)--------->ZAT14               <---------ANAC46 ----At4g35610--------->REM1(1)           <---------ZAT2    --------->ALFIN1 <-----------HVH21   tcacaagcagggtgcaacatctctatgtgacttttggttctcacagctgggtcaccatcccagtgctgcaccattccattgtcatctctggtttcgagtt  19098000                                                      <---------ANAC58                                                      <---------ANAC58                                           --------->ARR11(3)              ------------>CBF        <-                                           <---------GLK1(2)       --------->TOE2(3)              <--                                           <---------ARR11(3)   <---------ALFIN1               <-----                       <---------GLK1(2) <---------TOE2(3)   --------->ANAC46                 <------                       --------->ARR14(2)<---------TOE1(3)  ------>ZmHOX2a(1)     <------ZmHOX2a(1)<-                  ------------>CBF   <----------DOF2<-----------GT1--------->TOE1(3)      <----------DOF2   tcttatttcatcttcatcacttcaatattctctctcattctttaagattttgttttgccttcctctccaccttaatctccaataggatttatcttttatg  19098100                                                                   <------------CBF                                                                  <------ZmHOX2a(1)                <-                                                                 <---------YAB1       <--------------  <---------MYB46(3)        <---------ANAC46               <---------AHL20(2)         --------->HSFB2a(2) -----MYB83                 <---------ANAC58               --------->AHL20(2)         <---------HSFB2a(2) -------AtMYB61             <---------ANAC58       --------->GLK1(1)   <---------TOE2(3)----------->TBP ------RAV1(1)     <----------DOF2      --------->YAB1     <---------AHL20(1)        <--------------- ---TOE2(3)      <------------------------ANAC81   <---------GLK1(1)<---------WOX13(1)--------------- -----MYB46(1)<----------DOF2        <----------DOF2       --------->AHL20(1)        ================   ttggtgtttgagttttcttttcttttgtttgtgtgttttctttcatatttgggatttctattttattaggattgatgttacaacggttctataaatcgaa  19098200                                                       ---------->DOF2                      ---------                       <---------AHL20(2)            <---------------AGL15                  <--------                  --------->ICU4                     --------------->AGL15          --------->ARR14(2)      <-----------RAV1(1)                           ----------------->AGL2          <---------ARR14(2)    <----------DOF2<---------ICU4                   ----------------->AGL1         <---------GLK1(1)   <---------ANAC58--------->YAB1                   ----------------->AG           --------->GLK1(1)   <---------ANAC58<--------HAHB4              --------->YAB1         ------------>CBF  --------->LBD16 ---------DOF2    <---------YAB1               --------->AHL20(2)    --------->TOE2(3)<---------LBD16 -AGL15         --------->YAB1                ----------->TBP     <---------ICU4  ---------->DOF2 --AGL3    <---------ANAC46                   <---------ATHB12   --------->ICU4 --------->LBD16 >AGL15  <---------ANAC46                 ------------>CBF  ----------->GT1    --------->ANAC46    <- ====================================================================MADS_MADS<---------LBD16  <-----   actttgctttgttgtggataatcattttttttttttttggataaaccaataaaaaccaaaagaggtaattatctcaattacccgtaaatccggacatctt  19098300                                                                                  --------->TOE2(3)                                                                                  <-----------HVH21                                                                                 --------->bZIP60(1)                                       --------->TOE2(3)                         <---------bZIP60(1)                                    --------->KAN4(2)                            --------->ANAC58                                   <---------GLK1(1)                             <---------ANAC46                                  <---------ARR14(2)           <----------DOF2   --------->ANAC58      --------->MYB52(1)          --------->ARR14(2)          <---------ANAC58   --------->ANAC55(2) >ARR11(3)                        --------->ARR11(3)          <---------ANAC58   <---------ANAC55(2) -ARR11(3)            <---------ARR11(3)                  <----------DOF2     <---------MYB52(1) --------TOE2(3)      --------->ARR11(3)                 --------->TOE2(3)   <-----------HVH21   ---- -----DOF2  <----------DOF2------------>CBF        <---------ICU4  --------------->AtSPL8      ------   taagaattcaacggctttgtgaaagatttgtcaatggatattcttagaattcaacattacctttgctttgttgtacttctgttacgtcaaaccccttata  19098400                                  <---------ICU4                            --------->YAB1                               ---------->DOF2                           <---------YAB1      ---------->DOF2       ---------->DOF2                         <---------ICU4   <---------At4g35610   --------->ANAC58                         --------->YAB1   --------->LBD16       --------->ANAC58               ------                      ------->GAMYB       --------->At4g35610   --------->ANAC46               <-----                      --------->YAB1     --------->ANAC46       ----------->GT1              --------                     --------->MYB46(3) --------->MYB46(3)   --------->ARR14(2)           ---------->DOF2 <-----------GT1    -------->P   --------->AHL20(2)          <---------ARR14(2)         <---------HSFB2a(2) ------->TBP       --------->WOX13(1)<-----------GT1       --------->ANAC58         --------->GLK1(1) ----->TBP     --------->WOX13(1)<---------AHL20(2)        --------->ANAC58      ------------>CBF   tataaacccctccaagttaatcaaccatcatcatattaattacccgctgaaaagctccatcaagaaacgcaaaaagaaagcatggcaattccaaaagctc  19098500  Previous    Next  AGI:  At1g51480.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At1g51480 [Arabidopsis Thaliana] (GB:Q9C8K0); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43730.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43740.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43740.2); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00216.1); similar to RFL1 [Arabidopsis lyrata] (GB:AAL65637.1); similar to disease resistance protein Range:  from: 19094515    to: 19097974    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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