Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   <-        --------->At4g35610                                          --------->MYB52(1)        <<<<<<       <---------MYB46(3)                                     --------->ANAC58               <-------      <--------P                                              --------->ANAC46             --------->AHL20(2)     <-------GAMYB                                            <---------ANAC55(2)          -------->ATHB1    <---------MYB46(3)                                        --------->ANAC55(2)          --------->ATHB51    <---------DEAR3(2)                                        --------->ANAC55(1)          <--------HAHB4   <---------DEAR3(1)                                         --------->ANAC58             <---------AHL20(2) ------------>AtMYB77  --------->AHL20(2)                    <---------LBD16               <---------ICU4 ---------->HVH21      --------->YAB1               --------->ARR11(3) --------->ZAT6      --------->YAB1 ----HSFB2a(2)   <---------TOE2(3)          --------->At4g35610    <---------MYB52(2)     --------->ICU4 --->HSFB2a(2)  --------->MYB52(1)     --------->CCA1(2)   <---------REM1(2)              <---------ATHB51   gaacgacggttgctgtattaacgaataatataagttttgtgatataagctaagtgatattggacacggaactaacagttccaagttccaacaattatttt  19090700                                              <-------TEIL        --------->ATHB12                   <---------ZAT2                    --------->AHL20(2)       <---------MYB52(1)                  <---------STY1(2)                 <---------AHL20(2)      --------->TOE2(3)                    --------->STY1(2)                --------->AHL20(2)     <---------ICU4                    --------->ZAT2                    --------->AHL20(2)     --------->YAB1            --------->ANAC58   --------->ZAT14        --------->AHL20(1) <---------AHL20(2)            --------->ANAC58<---------ANAC55(2)       <---------AHL20(2)       <-- ------->TOE2(3)    --------->CCA1(2)  --------->STY1(2)     --------->ARR11(3)                  <--- ---------DOF2     --------->ARR11(3)  <---------STY1(2)     <---------ARR11(3)                <----- <<<<GT-3b         <---------ARR11(3)------->GAMYB<-------TEIL--------->CCA1(2)          ----------->GT1 --YAB1<---------YAB1          --------->ANAC46<---------ANAC46         --------->AHL20(2)    -------   tctttaatcgttattggaagagatataagaaataagcaacgagctagctacgtacagtctagagatataaaaaaaaaaattaatatcaaaaatgtaatta  19090800                                                                                    --------->ALFIN1                             <---------YAB1                                      --------->DAG2  <---------AHL20(2)      --------->ICU4                                        ---------->DOF2 --------->AHL20(2)  ----------->GT1                                       <---------ARR11(3) -------ZAT6         --------->YAB1                                        --------->ARR11(3) ------YAB1      --------->AHL20(2)                                       <---------CCA1(2) ----ICU4      --------->TOE2(3)                           <------ZmHOX2a(1) --------->TOE2(3)    --- -->ICU4      <---------------AGL15                --------->CCA1(2)  ----------->GT1  <---------YAB1   gtattaaatgaaatttacataaattgtaattttgatttagacatatttctcagatataagaggaatataagaccgtatatcttaaagtgctgattcagaa  19090900                                                                             <---------ANAC58                                                                   --------->MYB52(1)        --------                                                                --------->ANAC55(1)      --------->ANAC58                                                      --------->AtLEC2    <---------ZAT14--------->ANAC58               --------->ANAC58                ------>MYB46(1)  --------->ANAC46  ------->TEIL               --------->ANAC58                ------>MYB83     <---------ANAC55(2)      --------->AtLEC2      --------->YAB1      --------->ALFIN1  --------->ANAC58    --------->ANAC55(2)      --------->ANAC46  --------->AHL20(2)    <---------ZAT2      --------->ANAC58    --------->ANAC58 <---------CCA1(2)  <---------AHL20(2)    <---------ANAC46 --------->ZAT18        --------->ANAC58 <---------GLK1(2)  - ------>ICU4   --------->ANAC46         <------ZmHOX2a(1)      <-------TEIL  <---------ANAC58--------   atttttaattagaaaacaagacagcgaggtggagaacatggaggacaccaaattcaatgcaaatatacgtaacgagtttacttgaatctccatgcaagtc  19091000    --------->ANAC58    --------->ANAC46                                                             *TSS    --------->ANAC58                                                        --------->AHL20(2) --------->ZAT14                                --------->YAB1            ----------->GT1 <---------ZAT18                                <---------ICU4          ---------->DOF2 ->ANAC58                           <---------WRKY12               <---------ATHB12               <-- -------->AtLEC2      <-----------GT1          <---------ATHB12    ------------>CBF --------->ANAC46- ->ANAC58         ----------->TBP <---------ARR11(3)    ---------->DOF2<---------ATHB12       -------   ccatgcactcaaacccttgtatataaacccctccaaggtcatcgttttaatcatcaccaaaagaagcccatcaataaagaaaatacaaaccatggcaatt  19091100                                    <----------DOF2                            ---------->ID1     <---------ZAT18    <---------ANAC58          <---------HSFB2a(2)     --------->ZAT18    <---------ANAC58          --------->HSFB2a(2)   --------->At4g35610<---------ARR14(2)     <---------DEAR3(2) -------HSFB2a(2)     --------->ARR11(3)   <------NtERF2     --------->DAG2 --------->DOF2       --------->ARR14(2)---------->ID1      ---------->DOF2                        <- -->GLK1(1)   <----------DOF2  ------>ZmHOX2a(1) <---------ANAC46                      ---------->DOF2   ccaaaagctcactactctttagcagttcttgtccttctctttgtcgtcgtttcgagtagccaaaaagtctgcaatccagaatgcaaggccaaagaaccct  19091200                                                                                                <----                                                                                               <-----                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        --------->AGP1                                                              <---------ZAT2            --------->ARR14(2)                                   --------->GLK1(1)          <---------At4g35610       <---------ARR14(2)                                   <---------GLK1(1)          --------->At4g35610       <---------AGP1                                  <---------ARR14(2)   <-----------RAV1(1)              --------->ARR11(3)                                  --------->ARR14(2)<----------DOF2                     <---------ARR11(3)        --------->YAB1    --------->TOE2(3)         <---------DAG2               --------->AHL20(2) --------ALFIN1           ------->GAMYB          <-----------GT1               ----------->GT1 <-----   tccactgcgataatactcatgcattcaaccgtagtggatttcccaaaaatttcacttttggtgcagctacttcggcttatcaagtatatagatcttggct  19091300                        <---------YAB1                      --------->YAB1                      <---------ICU4                     <---------YAB1                   --------->YAB1                   <--------HAHB4                   --------->ATHB51                   <---------ICU4                  <---------YAB1                  --------->ICU4                --------------->AGL15                                                      <---------ZAT18             <-----------GT1                                                               --------->ZAT18           --------->HSFB2a(1)                                                             <---------ZAT14         <---------GLK1(2)<---------AHL20(2)                                            ---------->DOF2    --------->CCA1(2)--------->ICU4    <---------AHL20(2)                         <---------At4g35610 ------DOF2--------->HSFC1(2)      <---------YAB1                                ----------->RAV1(1) ----ANAC58<---------HSFC1(2)    --------->YAB1<---------ICU4                  <-------TEIL--------->ZAT14 ----ANAC58<---------HSFB2a(1)----------->GT1----------->RAV1(1) -------->P   --------->ALFIN1   ----   tttgggatatagaattttccattattattattttgttataatttatccaacatgacttaatttgttctaccagattgaaggtgcagcacatagagcactt  19091400                               <-----------HVH21                              --------->bZIP60(2)                                    <---------------AGL15                             --------->LBD16                                        <----------------                        <---------GLK1(1)          <-----------GT1                  -----------------                        --------->GLK1(1)      <---------YAB1                 <---------------AtSPL8                       <---------ARR11(3)     <---------AHL20(1)              --------------->AtSPL8                       --------->ARR11(3)   <---------AHL20(2)          ----------->GT1                --------->ANAC58        --------->YAB1                 <---------HSFB2a(2)                --------->ANAC58   --------->At4g35610                 --------->HSFB2a(2)      -----                --------->ANAC46   <---------At4g35610     <---------ARR11(3) <---------------AtSPL3 ----->MYB52(1)<---------LBD16--------->ANAC46<---------AHL20(2)      <---------ETT(2)         ------   aatggatgggactatttcacgcatagatatccaggtcatctaacatattattttttcccatggtcttcgatgtcgagaaaatagtacctatatttagatg  19091500                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR14(3)                                                                                 <-----------ARR10                                                                                 --------->ARR14(3)                                                                                 <---------ARR11(3)                                                                    ------>ZmHOX2a(2)      <---------YAB1                                                                   <------ZmHOX2a(2)   <---------ANAC58                                                                  --------->ARR14(2)   <---------ANAC46                                                              <---------LBD16    --------->AGP1                                                             --------->MYB52(1)  <---------AGP1     ----------->GT1                                     <---------------AtSPL8 <---------ARR14(1) ---------->DOF2                                         <---------------AtSPL3 <---------CCA1(2) -AGL3                                                   --------->DAG2      <---------At4g35610   <- >AGL3          <---------AtLEC2                        ---------->DOF2      --------->At4g35610   <- ------>GT1   --------->AtLEC2               --------->AHL20(2)   <---------ARR14(2)   <---------ANAC58 ----->GT1<---------YAB1<---------YAB1       <---------AHL20(2) --------->LBD16----------->ARR10<----   ttaaaaagagttattcatgcatggtcatgactcatgttttttgttatttatatacagaaaaagtaccggatcgtagttcagcagatcttgcttgtgattc  19091600  Previous    Next  AGI:  At1g51470.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G51490.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G47600.1); similar to OSIGBa0106G07.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67305.1); similar to OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66812.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21976.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 19091081    to: 19094082    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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