Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    ----------->GT1             -------                                                           --------->ANAC58                   <------ZmHOX2a(1)                   --------->ANAC46                        --------->ANAC58                  --------                   --------->ANAC55(2)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <--------       ---------->ID1                         ------->TEIL --------->ANAC46                --------->YAB1 -----MYB83   <---------AHL20(2)     <---------YAB1<---------AHL20(2)     --------------->AGL15  ---- -----MYB46(1)--------->AHL20(2)  <---------YAB1 <---------AHL20(2)<------ZmHOX2a(1)---------->DOF2 <   ttggtttttggctcaatttataagtaatcggaagtttttattagtatgtatatttttatgcaagcgataggataaacaaattttagtaaagaataaggat  19077600                                     <---------ALFIN1<---------ARR11(3)                                     --------->AtMYB61                                    --------->MYB46(3)                                  ------->GAMYB      --------->ARR11(3)                                  --------->AtMYB61 <---------CCA1(2)                                 <---------MYB55(2)--------->AHL20(1)                                 --------->MYB46(3)--------->ARR11(3)                             <--                               <-----------GT1     <---------ARR11(3)                          <-----                          <---------YAB1           <---------AHL20(1)<------ZmHOX2a(2)    --------->AHL20(2)                         <---------AHL20(1)   <---------YAB1        <---------ARR11(3)    <---------AHL20(2) -->YAB1                 --------->AHL20(1) --------->AHL20(2)  ---------->DOF2     --------->YAB1<-- --->GT1                 <---------AHL20(2) --------->YAB1<---------YAB1       <---------ZAT18<------ -TOE2(3)                --------->AHL20(2)<---------ATHB51  <---------YAB1  <---------------AtSPL8 ----->YAB1             --------->AHL20(2) <---------ATHB12--------->YAB1    --------------->AtSPL8 -----------GT1    <-----------GT1--------->ANAC46--------->AHL20(2)--------->ARR11(3)<---------YAB1   aataactcattccatcgtattatacattatatttaaccaccaccaattataaatatatctattataaaaagatcaaattagagtacttataattttttaa  19077700                                                                                  --------------->AGL15                                                                             <----------DOF2                                         --------->ANAC58              --------------->AtSPL8      ------>ZmHOX2a(2)     <----------DOF2                            <---------------AtSPL8 -------DAG2      --------->YAB1         ----------->GT1             --------->YAB1            ------ ------GT1  <---------ANAC55(2)          --------->ANAC58           <---------AHL20(2)   ----------->GT1 --------DOF2    --------->ICU4          <---------ANAC55(2)        <---------YAB1<---------------AGL15 -----GT1   --------->ANAC55(2)      --------->ARR11(3)            --------->AHL20(2) --------->YAB1   ctttttgatctattaagtattgatgacattctttaaaaatatcaagtaaaactattttcaaatgttctatataatagtactttccaaataatagtataaa  19077800                     --------->ANAC58                     --------->ANAC58             --------->CCA1(2)              <-------TEIL            --------->AHL20(1)           --------->At4g35610    <---------AHL20(2)         --------->AHL20(2)              <---------At4g35610    --------->AHL20(2)                  <       --------->AHL20(2)               --------->MYB52(2)  <---------YAB1                       ----  ----------->GT1  ---------->DOF2  <---------ZAT6        <---------AHL20(2)                     ---- ---->DOF2 --------->AHL20(2) --------->GLK1(2)       <---------MYB52(1)  <---------ZAT14      <-----   agtttagaaaaaaatatatgagaaagccaaataatctattgttagatgcataaaccgtttttatttttaaatggactaaactactaagaaaacatggaca  19077900                                                                                            ------>NtERF2                                                                                            ---------                                                                          <---------At5g28300                                                                         <-----------GT1   --------->ANAC58                                                                    --------->AHL20(2)     --------->ANAC46                                                                    <---------ATHB51       ------->GAMYB                                                                    <---------AHL20(2)     --------->ANAC58 ---------DAG2                    ---------->DOF2                 --------->YAB1          --------->SPL7 ----->ANAC58      <---------ANAC58     ----------->RAV1(1)     --------->AHL20(2)        --------->MYB46(3) ----->ANAC58      <---------ANAC58--------->DAG2          <---------AHL20(2)           <---------SPL7 ----ALFIN1--------->TOE2(3)  <------NtERF2                --------->AHL20(2)        ------>NtERF2   ccccttatccaaaccctagtttcttactgggcctcataaagcccacataagtctctaacatttaaaaaaaataattcactgtttctctgccatccgccag  19078000                           ----------->RAV1(1)                   <------NtERF2                                               --------->YAB1                 <---------DREB2C(2)    --------->REM1(1)                      --------->AHL20(2)  <-                 <---------DEAR3(1)    *TSS                                   <---------ATHB12     -- >LBD16     <---------AtLEC2           <------NtERF2                        --------->WOX13(1)    ---   tctctcaaaaatttgcaagtcggcgagtgccacaaactggctgcatcaaaaaaaacttctgtttcaatggagtctcttcaatcaaattccaaaattgaag  19078100                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                                              --------->LBD16                                                            <---------LBD16                                                           -------->P                                                           ------>MYB46(1)                                                           ------>MYB83                                                           --------->MYB52(1)                                                          --------->MYB55(1)                                                         <---------MYB111(1)                                                         <---------MYB46(2)                                                         <---------MYB59                                                        <---------HSFB2a(1)                         <                                                        --------->HSFB2a(1)                         <                                                        <---------HSFC1(2)                          -                                                        --------->HSFC1(2)                         --                                                       ------->TEIL                                --                                                  --------->LBD16--------->GLK1(1)                --- --------At4g35610                               --------->LBD16 <---------GLK1(1)                <-- ------->At4g35610                              <---------HSFB2a(2)                             ----- ------>GLK1(2)                                 --------->HSFB2a(2)   <<<<<<<<<TBF1 <-----------RAV1(1)   aagctgaacaaaatcccaaaattgaagaagcacaagtctcagtatcgcttcccgaagaacctaccggagttcttcttccctccgaactggtggacgattc  19078200          <---------HSFC1(2)          <---------HSFB2a(1)          --------->HSFC1(2)          --------->HSFB2a(1)       <------NtERF2      --------->LBD16     --------->LBD16     --------->RAP2.3(2)     --------->RAP2.6(2)    --------->ATERF1(1)    <------NtERF2    --------->RAP2.3(1)    <---------LBD16   ------>NtERF2   <---------ATERF1(1)   --------->ABI4(1)  --------->RRTF1(3)  <---------DEAR3(1)  --------->RRTF1(2)  --------->RAP2.3(2)  <---------ATERF1(2)  --------->RAP2.3(3)  --------->ATERF1(2)  --------->DEAR3(1) --------->RAP2.6(1) <------NtERF2 --------->ATERF1(1)                                                                       --------->LBD16 --------->RRTF1(1)                                                                      <---------LBD16 --------->ORA47(2)                                                                     --------->MYB52(1) --------->DEAR4(2)                                                                    --------->AtMYB61 --------->RAP2.3(1)                                                                   <---------ALFIN1 --------->ERF1                                                                       <---------MYB55(2) ---------RAP2.3(1)                                                                   --------->MYB46(3) ---------ATERF1(1)                                                                  -------->P ----->NtERF2                                                                      --------->MYB46(3) ------->ANAC46                        --------->ARR14(2)                     <---------TOE1(2) ------->DEAR3(1)                      <---------ARR14(2)                 <---------HSFB2a(2)      <- ------>At4g35610                   --------->YAB1                        <---------HSFC1(1)   ------ -------At4g35610                --------->WOX13(1)                       --------->HSFC1(1) -------- ----->CDC5--------->YAB1     --------->GLK1(2)     --------->At4g35610   --------->HSFB2a(2)<-------   agcgccgccggaatcatccgatgctgtcgaagaatcaatcgaaactgcttcagaagcagaagtatcaatttctcttctcgaaggaactaccaccggaacc  19078300                                                  --------->ATHB51                                                 <---------YAB1                                             ----------->GT1                                             --------->LBD16                                           --------->SPL7                                           <---------LBD16                                         <---------SPL7 ---------DOF2                         <---------HSFB2a(1)      <---------ATHB12 --->MYB46(3)                          --------->HSFB2a(1)     ------>MYB83 ->ARR14(2)          --------->ATHB12  --------->HSFC1(2)      ------>MYB46(1) --ARR14(2)         --------->ICU4     <---------HSFC1(2)   --------->MYB46(3)           <---------REM1(1)   gctcttcttccttctgaagagaatgatttagcgccattggaatcgtccggtataattgaagaaccaatcgatactgatttagagaaattagatgtagtag  19078400                     ------>ZmHOX2a(2)                                                             --                    <------ZmHOX2a(2)                           ------>NtERF2                      <-                   --------->ARR14(2)                      --------->At4g35610                   ----                   <---------ARR14(2)                      --------->ZAT2                  <---------ARR11(3)                 --------->LBD16                           --------->HSFC1(2)             <---------CCA1(2)                --------->ANAC46            <-------TEIL   <---------HSFB2a(1)        --------->TOE1(3)             -------->P              --------->ARR14(2)    <---------HSFC1(2)------>ZmHOX2a(1)  -----   ------->TEIL<---------LBD16       <---------ARR14(2)    --------->HSFB2a(1)        --------->TOE2(3)   ctatggatgttgatcaacccggatccgatttgaaaattgaatccgattcattctctgaagaagctccgactacttcttcctccgataaccctaaatctcc  19078500  Previous    Next  AGI:  At1g51450.1    Description:  SPla/RYanodine receptor (SPRY) domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO21886.1); contains InterPro domain B302, (SPRY)-like (InterPro:IPR001870); contains InterPro domain SPla/RYanodine receptor SPRY (InterPro:IPR003877) Range:  from: 19078039    to: 19080188    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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