Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->DREB2C(2)            <-------TEIL     --------->DEAR3(2)              <---------ZAT14 ------>DOF2                <------MYB83  --------->ZAT14                       <----------DOF2 -DEAR3(2)     <<<<<<<<<<<<<<<<<LFY  --------->ZAT14               --------->ZAT2 -->GT1----------->RAV1(1)  <------MYB46(1)          ----------->RAV1(1)    --------->RAP2.6(2) -MYB46(3)     ----------->RAV1(1)   --------->ZAT18<----------ID1 <---------ZAT2        ----------->GT1   aaagaaaaccgacatagcaacaatggagattggtccaagtacagtgaaggaagaacaacaaaaccgtcgagctcgagaccgcctttgagggaagttaaga  19063200                                                --------->TOE2(3)                                <---              --------->ANAC58                  --------->TOE1(3)                           ---------              --------->ANAC58               <-----------GT1                                <--------       --------->YAB1               <---------YAB1                                          <--------  <---------ZAT14                 --------->YAB1<---------DAG2         <---------MYB52(1)   ---------  --------->ZAT14               --------->ARR11(3)                 --------->MYB52(1)   >>>>>>>>>GT-1  <---------ZAT18  <------NtERF2<---------ARR11(3)    <---------AHL20(2)             ----------->GT1   acagttcagtcatagcaaggcagagaaactccaatatcatgaaaatgtaaccttattttttctgacaaaaaccggtttttgtttctctggttaataaatt  19063300                                           --------->ANAC58                                           --------->DEAR3(2)                                           --------->ANAC58                                          <-------TEIL                                          --------->SPL7                                          ------->TEIL                                          --------->SPL1(2)                                         --------->SPL1(1)                                         --------->MYB52(1)  <------------CBF                      --------->TOE1(2)                        <-------GAMYB --------GT1                            <---------SPL7                           <---------ANAC58 >AHL20(2)                              --------->TOE2(2)                  <---------ALFIN1 -AHL20(2)                            <---------------AtSPL3             <---------ALFIN1 -AHL20(1)                    <---------TOE2(3)                      <-----------HVH21          <---- >AHL20(1)     <------------CBF      <------------------SPL14<------ZmHOX2a(1)   <---------ANAC58<---   tacgaattgagttcaagtattggttttttgttaatgaataaacgtacggacgagagaataagaggagtcagagtcacacacttggttgagaaatgtcccg  19063400                                <------NtERF2                               --------->ZAT18                               ------>NtERF2                               <---------ZAT18                              <---------ANAC58                     ------>ZmHOX2a(1)                     <---------------AGL15                    <-----------------AGL3                     --------->AHL20(2)                    ========================================MADS_MADS            ------->GAMYB<---------ICU4                  <------ZmHOX2a(1)           <------------MYB.PH3(2)        ----------------->AGL3    --------->DAG2     <---------ARR11(3)           <---------MYB52(2) <---------ANAC58          ----------->GT1                --------->ARR11(3) ---GAMYB--------->MYB52(1)   <---------ANAC46         ----------->GT1   <------NtERF2 <-----------ARR10 ------MYB52(1)--------->HSFB2a(1)        ----------------->AGL2  ---------->DOF2 <---------TOE2(3)   ttggaaaactctaacgaactctcctaaaaatggcgcgcttgaaacccaaaaacagaacaggaaaaataaaaaggcagagaggctaagaatatctaagttt  19063500                                                                                        --------->At4g35610                                                                                      ===============                                                                                      <------ZmHOX2a(1)                                                                                   <-----------RAV1(2)                                  <---------AHL20(2)                            ----------->HVH21                           ----------->GT1                                  <---------ANAC58                         ----------->GT1             --------->At4g35610    --------->ALFIN1                     ---------->DOF2     ---------->DOF2--------->At4g35610 <---------ANAC58 <-------               ---------->DOF2   --------->AHL20(2)  <---------At4g35610  --------->ALFIN1  <--------   tgaagaattcaaacacagaaagaaaaagagagaaaataaatctgaaagaagaatgagcagcgaagaagagaagacagtgtgtgtgacaggagcttcaggt  19063600                   <---------TOE1(3)            ---------->DOF2                <---------MYB52(1)            --------->DOF5.7(2)     <----------DOF2                          <---------MYB52(1)    <---------ANAC58                <---------MYB46(3)    <---------ANAC58      <<<<<<<<<TBF1      --------->At5g28300  ------>ZmHOX2a(2) ====================HOX2a_HOX2a  --------->LBD16           <---------ANAC58 --TOE1(3)     <-------GAMYB     <---------ANAC46           <---------ANAC58       <-----------GT1 ---RAV1(2)   ------>ZmHOX2a(2) <---------LBD16 <---------DOF5.7(2)            <----------DOF2   tacattgcttcatggatcgttaagcttcttcttctccgtggttacaccgttaaagcctctgttcgtgatccaagtctgtctcttttctctattcaatctc  19063700                    <------ZmHOX2a(2)                   --------->ARR14(2)                   <---------AGP1                   <---------ARR14(2)                                                 <---------TOE2(3)              <-----------GT1                                                       <---------AHL20(2)              --------->MYB52(1)                                               <---------RVE1(1)       ----------->GT1                                                        <---------ARR11(3)   --------->ARR11(3)                                                   --------->ARR14(2)   --------->ARR14(2)                      --------->AHL20(2)    --------->ATHB12  <---------AHL20(2)   <---------ARR11(1)                 <---------TOE2(2)         --------->ICU4--------->ARR11(3)   <---------ARR11(3)                 <---------TOE2(3)         <---------YAB1<---------GLK1(2)   <---------ARR14(2)------>ZmHOX2a(2)<---------TOE1(2)      <-------TEIL   <---------TOE2(3)  <---------CCA1(2)------->TEIL     <---------MYB52(1)    --------->ICU4<---------ARR14(2)         --   ttccaaatcttgtatataacggatctaatatagtttctcttaggtttaaatagaagagtcatgttcatgattcggatttagattttttaatgaaatttga  19063800                             --------->ICU4                        ----------->GT1                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->ARR11(3)                    <---------ARR14(3)                    --------->ARR14(3)                    <---------ARR11(3)                    --------->ARR14(2)                    <---------ARR14(2)                    --------->AGP1                                                                ---                    <---------AGP1                                                                ---                   --------->RVE1(1)            <-------TEIL                                      ---                ---------->DOF2       -------->HAHB4                                   <-----------RAV1(2)               <---------AHL20(2)     --------->ATHB12                     ----------->GT1      ----- -------->DOF2 --------->AHL20(2)    <---------ATHB12                  <---------ARR14(2)      ------   agaaagatgagaaacaattaaagatcttgtaattttcaaatgattcaagattcatagatttgtttactctgtatatatggttcaatggaacagatgatcc  19063900                               <---------At4g35610 ------>ANAC46                 --------->At4g35610 ------>ANAC58               <------ZmHOX2a(1)                                                      < ------>ANAC58  <---------ANAC46          ----------->GT1--------->ANAC58                      <----- ---->TOE1(2)   <---------ANAC58     <------ZmHOX2a(1)   --------->ANAC58                  <---------At4g35610 >ZmHOX2a(2)    <---------ANAC58  --------->At4g35610  ---------->DOF2           <----------DOF2    -   aaggaaaacagagcatttgcttgcattggaaggagcagaggaaaggcttaaattgttcaaagcaaacttgttagaagaaggctctttcgattcagcaatc  19064000                                                    --------->ARR14(2)                                                    --------->PCF2                                                   <------ZmHOX2a(1)                                                 --------->ANAC58                                                 --------->ANAC58                                             <-----------HVH21                                            <---------O2   --------->TGA1a                                            --------->TGA2(1)                                            <---------ANAC46                                            --------->O2   <---------O2                                            <---------TGA2(1)--------->ALFIN1          <------ZmHOX2a(1)                 <---------bZIP60(1)     <---------ANAC58                       --------->bZIP60(1)     <---------ANAC58  --------->DEAR3(1)  --------->RAP2.6(3)     <---------ANAC46 --------->ANAC46    <---------TGA2(2)<---------TGA1a <-------GAMYB        --------->ANAC58   ----------->TGA1  --------->O2                  --------->ARR14(2) ---------MYB46(3)    --------->ANAC58 <---------ICU4      --------->At4g35610           <---------ARR14(2) ----ATHB12         <---------ALFIN1   --------->YAB1      <---------At4g35610        <---------ANAC46 -------->MYB55(2)  --------->ANAC46  <---------ATHB12   <-----------RAV1(2)         ---------->ID1   gatggttgcgaaggagttttccacaccgcatcgccattctatcatgacgtcaaggaccctcaggtgtctctctctctccctcattttggcgcatactctt  19064100  Previous    Next  AGI:  At1g51405.1    Description:  myosin-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO21893.1) Range:  from: 19061448    to: 19063250    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g51410.1    Description:  cinnamyl-alcohol dehydrogenase, putative (CAD). similar to cinnamyl-alcohol dehydrogenase, putative (CAD) [Arabidopsis thaliana] (TAIR:AT5G19440.1); similar to putative cinnamyl alcohol dehydrogenase [Malus x domestica] (GB:AAC06319.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 19063553    to: 19065092    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version