Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------YAB1                                                <---------ANAC58                                                <---------ANAC58                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                               <-------TEIL                                              --------->CCA1(2)                                             --------->ARR14(2)       <---------TOE2(3)                     --------->ARR11(1) ------ANAC58                                <---------ARR14(2) ------ANAC46                          --------->ATHB12                                     ------>NtERF2 ------ANAC58          <---------At4g35610   <---------GLK1(2)            <---------MYB46(3)<-------- ------->GT1           --------->At4g35610 ----------->ARR10  <---------YAB1               <---------ANAC58 >ARR14(2)   --------->ALFIN1          --------->YAB1   <---------YAB1 <-----------RAV1(1) <---------ANAC46 -ARR14(2)<---------DEAR3(1)          <---------YAB1 --------->ICU4<---------YAB1          <---------ANAC58   ggtgaaattgaggctgtggatgatcagatgaagttgcagaatgataagattcgtgattatgttgatgataccattgttgttgagttcaatgtgccgtctt  19048500                                                            <-----------GT1 --------->LBD16                                                  ------->GAMYB           <---------LBD16                                               --------->MYB52(1)    <------MYB83                     ----------->GT1         ------>ZmHOX2a(1)       <------MYB46(1)                  ------->TEIL              --------->TOE1(3)       --------->MYB59                --------->ZAT18             <---------ANAC55(2)     <---------AtMYB61 -RAP2.6(3)     <---------ZAT18             --------->TOE2(3)     <---------MYB52(1)  <---------ANAC46   cttcataagtcttctaagtgtacctgtaaaatgctccaatttcattccttaaccgaaattttaaaccagtttggtctccggtgtaatttcgtcgattaca  19048600                   <------NtERF2                  --------->ABI4(1)                  <---------ATERF1(1)                  ------>NtERF2                 <---------DEAR3(1)                 --------->RAP2.3(2)                 --------->DEAR3(1)                 --------->ATERF1(2)                 --------->RAP2.3(3)                 --------->RRTF1(2)                 --------->DREB2C(2)                 --------->RRTF1(3)                --------->RRTF1(1)                --------->DEAR4(2)                --------->RAP2.6(1)                --------->ERF1                --------->ORA47(2)                --------->RAP2.3(1)                <------NtERF2                --------->ATERF1(1)               <---------RAP2.3(1)               <---------At4g35610               --------->ABI4(1)               --------->At4g35610               ------>NtERF2               <---------ATERF1(1)               <---------DEAR4(2)               <---------DREB2C(1)              --------->ANAC46              --------->RAP2.3(2)              <---------ALFIN1              --------->RRTF1(2)              --------->RRTF1(3)              --------->RAP2.3(3)              --------->DEAR3(1)              --------->RAP2.6(2)              <---------DEAR3(1)              <---------ATERF1(2)             --------->RAP2.6(1)             <------NtERF2             --------->ATERF1(1)             --------->DEAR4(2)             --------->RRTF1(1)             --------->ORA47(2)             --------->RAP2.3(1)             --------->ERF1            --------->ABI4(1)            ------>NtERF2            <---------DREB2C(1)            <---------ATERF1(1)            <---------RAP2.3(1)            <---------DEAR4(2)            <---------At4g35610            --------->At4g35610           --------->RAP2.3(3)           <---------DEAR3(1)           --------->ANAC46           --------->RRTF1(2)           --------->RAP2.3(2)           --------->RRTF1(3)           --------->DEAR3(1)           --------->RAP2.6(2)           --------->ATERF1(2)           <---------ALFIN1           <---------ATERF1(2)          --------->RAP2.6(1)          --------->ATERF1(1)          <------NtERF2          --------->DEAR4(2)          --------->RRTF1(1)          --------->ORA47(2)          --------->RAP2.3(1)          --------->ERF1         <---------DEAR4(2)         <---------RAP2.3(1)         <---------DREB2C(1)         --------->ABI4(1)         --------->At4g35610         ------>NtERF2         <---------ATERF1(1)         <---------At4g35610        --------->ANAC46        --------->ATERF1(2)        --------->DEAR3(1)        --------->RAP2.3(2)        <---------ATERF1(2)        --------->RAP2.3(3)        <---------DEAR3(1)       --------->RRTF1(1)       --------->RAP2.6(1)       --------->ATERF1(1)       --------->DEAR4(2)       --------->ERF1       --------->ORA47(2)       --------->RAP2.3(1)       <------NtERF2      <---------ATERF1(1)      ------>NtERF2--------->RAP2.3(1)      <---------RAP2.3(1)     --------->DEAR3(1)                      <---------AHL20(2)     <---------DEAR3(1)           --------->AHL20(2)    <------NtERF2--------->RAP2.6(2)    <----------DOF2                               --------->YAB1    --------->ATERF1(1)       <---------AHL20(2)                                   --------->WOX13(1)   <---------ATERF1(1)       --------->AHL20(2)              ---------->DOF2       --------->YAB1   <-----------HVH21 <---------SPL7  --------->ARR11(3)    --------->AHL20(2)      <-----------GT1  <---------DEAR3(1)<---------ANAC46 <---------ARR11(3)    <---------AHL20(2)<---------DEAR3(2) <------NtERF2--------->ATERF1(2) <---------AHL20(2) <---------ALFIN1    --------->ANAC46   gtcgtcgtcgccgccgccgccgccgtatgtattaaataaaatctttttttattcaacacatttaaaagctcatttacgtcggtattaatcatattagacc  19048700                                                    --------->ANAC46                                                    <---------ALFIN1                                                 --------->ZAT14                                                 <---------REM1(2)      --------->ZAT2                                                 <---------ZAT14        <---------ZAT2        <------             --------->YAB1                    --------->ANAC46        --------->MYB52(1) --------->ANAC58    ------>MYB83                         --------->ANAC58           ------->GAMYB         --------->ANAC58    ------>MYB46(1)                      --------->ANAC58<---------MYB52(1)          --------->ANAC46    -------->P                     ---------->DOF2<---------ALFIN1-------->P     --------->CCA1(2)---  --------->AtMYB61           ------->TEIL   --------->ZAT6     --------->MYB46(3) --------->MYB52(1)   aagaccaactcggtttcataagagttaagatgaaactagaagcacgaacactacacaccgttttcatcaaccccaactgagagataaacggcaaggcttt  19048800                                                                                    =================                                                                                *TSS<------ZmHOX2a(1)                      ---------->DOF2                                        ------->GAMYB <------------CBF ----------->GT1            <---------ANAC46                --------->TOE2(3) ----DOF2   <<<<<<<<<<<<<<<<<LFY           ------>NtERF2               --------->REM1(1) --------->CBF    <---------MYB46(3)------>ZmHOX2a(2)     --------->YAB1  --------->MYB52(1)       --   cgcaattgaaattctcacagtggttaaaggcacttggatcgatggtgccttaggcttcattcatcatcttgctacataaccgtagaggaagacgaatagg  19048900                   <---------AHL20(2)                   --------->AHL20(2)                --------->ATHB51                -------->HAHB4                --------->YAB1                <---------ICU4                <--------ATHB1               --------->ICU4               <---------YAB1               <---------ATHB51          ----------->GT1        ------>NtERF2     --------->At4g35610               <-------TEIL   ------>ZmHOX2a(2)            <------MYB83  <---------At4g35610           <------MYB46(1)                   <---------ANAC58  --------->At4g35610           <---------ANAC55(2)       <-----------GT1                         --- =========HOX2a_HOX2a          --------->MYB46(2)     <----------DOF2                   <------ZmHOX2a(1) --------->ARR10<--------HAHB4 --------->MYB59   <<<<<<<<<TBF1    <---------ANAC58   <---------LBD16   tttgatctgccgaggtaataattaaactgcaattaggtgagttcatgcttcttcttcttttaactgtttcttgatttttagtaatcttcaggaagccctt  19049000                                    <---------ARR11(3)                                    --------->ARR11(3)                                    --------->ARR14(2)                                    <---------ARR14(2)                                   --------->GLK1(1)                                   <---------GLK1(1)              <----------DOF2                                <---------YAB1               <----------DOF2 ------>REM1(1)        <----------DOF2                ---------->DOF2                      --------->TOE2(3)   acatctaattttagttgttctatctctttccattacgatatctgttttgagtctctcaaagggcttttctttcatgtgaaaatttctaacatttcttaac  19049100                            --------->ZAT6              <------MYB46(1)                           <---------YAB1               <------MYB83                                <                          <-----------GT1              --------->MYB59                             <-                        --------->AHL20(2)             <---------TOE2(3)                          <--                  <-----------GT1        --------->GLK1(2)          <---------AHL20(2)           <---              <---------ARR14(2)        <---------GLK1(2)  <-------TEIL               --------->ANAC58      ---------->DOF2   <---------AHL20(2)          <---------GLK1(2)                 --------->ANAC58   tggaacttaaaaggagtattttgcaatttatcagtattttgagaatcgcatccagattaggttgatacaatttatctcgttttttcactcgaaattagat  19049200                                                                                     <------MYB46(1)                                                                                     --------->ALFIN1                                                                                     <------MYB83                                                                  --------->REM1(2)  <---------ANAC58                                                               <---------ANAC58      <---------ANAC58                                                               <---------ANAC46     --------->MYB111(1)    <-----------RAV1(1)                                        <---------ANAC55(1)  <---------MYB46(3)  <---------ANAC58                                             <---------ANAC55(2)  --------->MYB55(2)  <---------ANAC58                                             --------->ANAC55(2)  <---------DEAR3(1)  <---------ANAC46                                             <---------ANAC58     --------->MYB111(2) ---------MYB46(3)                                       --------->AHL20(2)        <---------ANAC46 -------P                                                <---------AHL20(2)        --------->ALFIN1 -----GAMYB <----------DOF2           <---------YAB1     <---------YAB1  ----------->GT1            > ------MYB46(3)              ----------->GT1       --------->AHL20(2)  ---------->DOF2   <------NtERF2   ggttgtttgtgggactttcaatattcagtcttggtaaattttgatgatgcagattatatataattgcgtgaagaaaagagaaatggtgggtggcaagaag  19049300                                                                 --------->ARR11(3)                                                         <---------HSFB2a(1)                    <-----------HVH21                    --------->HSFB2a(1)               ---------->DOF2                         <---------ARR14(2)           ----------->HVH21       --------->CCA1(2) --------->LBD16         <---------ANAC55(2)      <---------ARR14(2)<---------HSFB2a(2)         --------->ANAC55(2)  <------ZmHOX2a(1)     --------->HSFB2a(2)       --------->CCA1(2)<---------ANAC55(2)        <---------LBD16      <---------ARR11(3)<---------O2              --------->MYB52(1)      --------->ARR11(3)--------->O2  <------ZmHOX2a(1)--------->ARR14(2)   <----------DOF2      --------->ARR14(2)--------->TGA1a           <---------At5g28300       <---------DAG2      <---------ARR14(2)<---------TGA1a   --------->ANAC58       <---------ARR11(3) >>>>>>>>MYB2  ===================bZIP_DOF--------->ANAC58      <---------GLK1(1)               <----   aaaaccaagatatgtgacaaagtgtcacatgaggaagataggataagccagttaccggaacctttgatatctgaaatactttttcatctttctaccaagg  19049400  Previous    Next  AGI:  At1g51360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31670.1); similar to unknown [Populus trichocarpa] (GB:ABK93857.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsive alpha-beta barrel (InterPro:IPR013097) Range:  from: 19047852    to: 19048568    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g51370.1    Description:  F-box family protein. Identical to F-box/FBD/LRR-repeat protein At1g51370 [Arabidopsis Thaliana] (GB:Q6DBN6;GB:Q3ECS4); similar to F-box family protein (FBL13) [Arabidopsis thaliana] (TAIR:AT5G53840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 19048880    to: 19051121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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