Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------YAB1                                  <--------HAHB4                                  --------->YAB1                                  <---------AHL20(2)                                  -------->ATHB1                                  <---------ICU4                                  --------->ATHB51                                  --------->AHL20(2)                                               --                     <---------AHL20(2)                                                            <-                    <---------AHL20(2)<---------AHL20(2)                                           --                    --------->AHL20(2)--------->AHL20(2)                              <---------AHL20(2)            --------->AtLEC2     <---------ATHB12                                 --------->AHL20(2)            ----------->GT1      <---------ATHB51                         ----------->GT1         ---     <---------AHL20(2)          --------->ICU4  <----------DOF2   <---------YAB1 <---------AHL20(2)     --------->AHL20(2)  <---------ICU4     <-----------GT1 <----------DOF2      <---------AHL20(2)<-   tttgcattttattcatgtaaaatttaatctttgcaattatttttatattcccttttaagaggctttattttgatacaggtaaaattatttagtttgacaa  19015400                                                                                --------->ZAT18                                                 --------->AHL20(2)             --------->ZAT14                                                 <---------ATHB51               <---------ZAT14                                                 <---------AHL20(2)             <-------TEIL               <-------TEIL                     <---------AHL20(1)              <---------ZAT18  ----         --------->TOE2(3)              --------->DAG2                      --------------->AtSPL8 ------->ARR11(3)       <---------GLK1(1)      --------->YAB1               <---------------AtSPL8 --------ARR11(3)       --------->CCA1(2)    --------->AHL20(2)         --------->ATHB12 <-----------GT1 ------->AHL20(1)      --------->ARR14(2) ----------->GT1               -------->HAHB4 --------->YAB1 ------>AHL20(2)--------->ATHB12       ---------->DOF2                 --------->ICU4 <---------ATHB51 --------AHL20(1)      <---------ARR14(2)----------->GT1               <---------ATHB12<--------ATHB1   atatatcaaaacataaattcatttggatatgtgtaaatctaaaaagttaaaataattcatgaactactactaaatgattaagtacacaataatacatttc  19015500                          <---------AHL20(2)                          --------->AHL20(2)                        --------->AHL20(2)                        <---------AHL20(2)                    <---------AHL20(2)                  <---------AHL20(2)                  --------->AHL20(2)                                                           <-----                --------->AHL20(2)                                                             <-----              --------->AHL20(2)                                                               ------              <---------AHL20(2)                                                               ------            --------->AHL20(2)                                                     --------->ANAC46            <---------AHL20(2)                                                   --------->AtMYB61          --------->AHL20(2)     --------->ARR11(3)                        <---------YAB1   ---------          <---------AHL20(2)     <---------ARR11(3)                      --------->YAB1    --------->AHL20(2)   <---------ARR11(3) --------->AHL20(2)                       <---------TOE2(3)--------->MYB46(3)   --------->ARR11(3) <---------AHL20(2)    <---------AHL20(2)---------->DOF2 <-----------GT1 <------  <---------CCA1(2) --------->AHL20(2) <-------TEIL   ----------->TBP   <---------YAB1     <---------AHL20(2) ----->HSFB2a(2)<---------AHL20(2)--------->CCA1(2)   <---------YAB1    --------->ICU4    --------->AHL20(2)   tagtatatctatatatatatatatatatatatatagatatatacatatatttgtttataaatactaaagtagctatgatgaaaccactccaaattaatat  19015600            <---------MYB52(1)                            --------->AHL20(2) <---------ANAC58                                        ============================================ <---------ANAC58             --------->GLK1(2)          <---------------AGL15 ----AHL20(2)     <---------AHL20(2)                  ------>ZmHOX2a(1) ----AHL20(1)    <---------AHL20(2)               <-----------GT1                               <---- --->AHL20(1)    --------->AHL20(2)        --------->AHL20(2)                                   <---- --->ARR11(3)<---------AHL20(2)            <---------AHL20(2)                              <--------- >AHL20(2)----------->GT1   <---------HSFC1(2) <---------AHL20(2)     --------->TOE2(3)   <---------ANAC58 -----TBP <---------ZAT6    --------->HSFC1(2) <---------ICU4         --------->YAB1      <---------ANAC58   atagcttatctacagttaattttatatggaagtatctaatacattttaaatatttcctcataaatttagtaatcttagtaaaacatctatttgcttttac  19015700                                    <---------YAB1                                  --------->AHL20(2)                                  <---------AHL20(2)                              --------->AHL20(2)                             --------->AHL20(2)                             --------->AHL20(1)                             <---------AHL20(1)                          <---------ICU4     <----------DOF2                          --------->ATHB51   ------>ZmHOX2a(1)                          <--------ATHB1   <-----------------AGL3                          <---------AHL20(2)--------------->AGL15                          --------->AHL20(2)<---------------AGL15                         <---------ATHB12 ---------->ID1                         <---------ATHB51<-----------GT1                         --------->ICU4 <-----------GT1          --------->ANAC46                     ------------>CBF <---------AHL20(2)         --------->ANAC55(2) ============================================================MADS_MADS -----ANAC58    <---------DAG2<---------AHL20(2)                <-------TEIL -----ANAC58    <----------DOF2  <---------AHL20(2)    <---------ARR11(3) -DOF2       <-----------GT1 <---------AHL20(2)        --------->ARR11(3)        <---------YAB1   ---   ttgtttttttgtatattactttatgcaataatttatttatttttatccttttttagagaccttatatacgtagtactagttatatgatttagaaaatttt  19015800                                                                                --------------->AGL15                                                                                ------>ZmHOX2a(1)                                                                                <---------------AGL15                                                                               <-----------------AGL2                                                                               ----------------->AGL3                                                                               <-----------------AGL3                                                                             <------ZmHOX2a(2)                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                            <---------ARR11(3)                                                                 --------->ATHB12                                                      ------>MYB46(1)       --------->ARR11(3)                <----------DOF2                    <---------HSFB2a(1)     --------->GLK1(1)         --------->YAB1                            <---------HSFC1(2)      <---------GLK1(1)       XX   --------->ANAC58                                --------->HSFC1(2)     ----------->ARR10   -------   --------->ANAC58                 --------->MYB52(1)------>MYB83       <------ZmHOX2a(1)  <--------   --------->ANAC46   <-----------GT1              --------->HSFB2a(1) <---------ANAC46  <---------TCP20 -------->HVH21<---------ICU4 ---------->DOF2     ------->TEIL  --------->ICU4------>ZmHOX2a(2)------   gtgacacccaagtataatctttattttcatcttaaagctaatggtctcggtgaaccttccatgggaattagtggaggagatcctatatagggttccacct  19015900                                           <---------DAG2                                           <----------DOF2                            --------->ANAC58 XXXXXXXXXXXXXXXXXX>MIR837-5P        --------->GLK1(1) -->ANAC46                  --------->ANAC46                                        <------ZmHOX2a(2) -ALFIN1                    --------->ANAC58                            <---------ALFIN1 --->TOE2(3)     <------ZmHOX2a(1)   <---------GLK1(1)              --------->MYB46(3)     --------->AtMYB61   caatctcttgctcgattcaggaccgtatgtaagcaatggaattctctttttgacgacaacaagtttgtgaacgaccacttggttcgatcacgaccacaat  19016000                                    <---------MYB52(1)                                    --------->DOF5.7(2)                           --------->MYB59                                              ------>ZmHOX2a(1)                        <---------ARR14(2)                                              --------->LBD16             --------->GLK1(2)     --------->At5g28300                      --------->TOE2(3)            --------->ARR14(2)     <---------RAP2.6(3)                    <---------TOE1(3)            <---------ARR14(2)    ----------->GT1                        <---------DOF5.7(2)            <---------GLK1(2)<---------MYB52(1)                 <-------TEIL--------->TOE1(3)   tcatgttccgaacagattctaagatgtattcggtagccgttaatttcagtggtccatggatagaggtccatgagttaaccttagacattcctggtttgaa  19016100                                          <---------ANAC58                                          <---------ANAC46                                          <---------ANAC58                                    <---------YAB1                                <---------ANAC58           <---------STY1(2)     --------->ATHB12          <---------ARR14(2)    <---------ANAC58           --------->STY1(2)  <-----------------AGL3   <---------At4g35610         --------->ATHB12    --------------->AtSPL8     <-----------------AGL1   --------->At4g35610        <---------YAB1  ---------->ID1          ---------->DOF2       ---------   ttgtgagatgccaatatggctatacaactatgttgattgtgatggcttgttgttttgtactagctacaagtttaaaggggtcttgatttggaacccctgg  19016200                                        --------->ANAC58                                        --------->ANAC58                                      --------->MYB52(1)                                     --------->TOE1(2)                                    --------->MYB46(3)                              --------->YAB1                             <---------YAB1                           <---------ICU4                           --------->YAB1------->GAMYB         --------->YAB1                          <---------ATHB12                    <---------YAB1                        --------->WOX13(1)                  --------->YAB1               --------->ICU4              --------->KAN4(2) <---------YAB1             <---------YAB1           <---------ANAC58             --------->KAN4(1)<---------ICU4         <---------TOE1(2)              <---------ANAC58             <---------KAN4(1)<--------HAHB4         <---------TOE2(2)     --------->CCA1(2)<-------- -->RAV1(2)<---------GLK1(2) --------->ICU4     <-----------HVH21 --------->YAB1   <-------TEIL------   ttgaaacaaactagattattcgcatccaatcatcattatccaacgaaatatgtcataggttatgataataagaaacgatacaaggtgcttgattatgaat  19016300  Previous    Next  AGI:  At1g51290.1    Description:  F-box family protein (FBX10). Identical to Putative F-box only protein 10 (FBX10) [Arabidopsis Thaliana] (GB:Q9SYD0); similar to F-box family protein (FBX11) [Arabidopsis thaliana] (TAIR:AT1G51320.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 19015841    to: 19016974    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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