Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ANAC58  <-----------GT1 ----->TOE2(3)                                      --------->LBD16 >MYB46(1)                                         --------->ANAC58 -->P --------->ANAC46                             --------->ANAC55(2) >MYB83  --------->ZAT18                           --------->ANAC58 --MYB111(1)         --------->MYB46(3)  ---------->DOF2 --MYB55(2)     <---------ATHB12        ------->GAMYB ->MYB46(3)    ------>MYB83            --------->MYB46(3) --MYB46(2)    ------>MYB46(1)        --------->ANAC58 ->AtMYB61    --------->WOX13(1)--------->At4g35610--------->ANAC46 ->DEAR3(1)  --------->MYB46(3) --------->ZAT2    <---------LBD16  --------->KAN4(2) --MYB111(2) --------->AtMYB61  <---------At4g35610<---------ANAC55(2) -GT1 --------->ANAC58 -------->P     --------->ANAC58----------->RAV1(1)   ctttatacaagcccaccaatcaaacaaccatatgagctgcaaccaaagtaattccgcaacatttttgtttattcttctatacaaacttcttgagaatgga  19008900                                                        ----------->HVH21                                                      <---------At4g35610     --------->YAB1                                  --------->MYB52(2)              <---------YAB1     <---------ICU4--------->ZAT2                  <---------MYB52(1)           ------->GAMYB    <---------ATHB12        ----------->GT1       <----------DOF2        <---------AHL20(2)    --------->ICU4 <---------ZAT2                --------->TOE2(3)      --------->AHL20(2)      -----   cgaacaatgatgaagaacacaagctggaaacagagaaaatgtgtccaaaaacctttagttgacacaagtttcgattttataacagacattatagaacata  19009000                                                     <----------DOF2       --------->At4g35610                <---------YAB1                                            <       <---------At4g35610              --------->YAB1                                      --------- ---->AHL20(2)                         <---------ATHB12                         <-----------GT1------   aaatgtttcagctatgtctcttccattgagaagacaatacaatgaagatagacttcttttggtatcagagcaaaacaagttttaacaaaaatggatgacc  19009100                                                                       ------>ZmHOX2a(2)                                                                       =============================HOX2a_HOX2a                                                                      ==============================HOX2a_HOX2a                                                                      <------ZmHOX2a(2)                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                                                                     --------->ARR14(3)                                                                <-----------RAV1(2)                                                  ---------->DOF2    <---------ARR11(3)                                          -------->P            <------NtERF2                                         ----------->RAV1(1)  --------->RAP2.3(2)            <----------CDC5             --------->AtMYB61     --------->DEAR3(1)                 ----         <---------TOE2(3)          --------->ZAT18          --------->RAP2.3(1)             <------ZmHOX2a(1)  --------->YAB1         <------ZmHOX2a(2)------>MYB46(1)  --------->ARR14(2)              --------->ANAC58 ---------WOX13(1)       =================HOX2a_HOX2a      <---------ARR14(2)              --------->ANAC58 -->HVH21<---------------------WRI1<------ZmHOX2a(1)<----------ID1   --------->ARR14(2)  --------->CCA1(2) --->At4g35610          --------->ARR11(3)------>MYB83   ----------->ARR10             --------->CCA1(2)   tgaatgatgttgacgatgagccctgagatcaagaagaggacaccaacagggataaagacaagagccgcagggatcttcatgtctgagagagataaggaac  19009200                                                             <---------MYB52(1)                                                     <------ZmHOX2a(1)                                                 ------->GAMYB             ------->GAMYB                     ------>MYB83 <-------GAMYB          ----------->RAV1(1)                  ------>MYB46(1)        --------->At4g35610                   ----------->RAV1(1)  ---------->DOF2     <---------YAB1          --------->MYB52(1)             <---------GLK1(2) ------->RAV1(1)   --------->GLK1(2)         --------->AtMYB61  <---------YAB1   <----------DOF2   aacacaaagcagcaacagaagaatatgaaaaattgttgaagaagacaccaacagaggatgactgttatctttgttctcaaattctttttgggagattaga  19009300                                                                                                   <-               <---------ARR14(2)                                                                  <-               --------->ARR14(2)                                                                  <-               --------->ARR11(3)                                                                 <--               <---------ARR11(3)                                                                 <--           <------ZmHOX2a(1)   --------->ANAC58                                                   <--          ----------->GT1      --------->ANAC58                                            ----------         <---------TOE2(3)     --------->ANAC46                                            <---------         *TSS  --------->GLK1(2)                                    ---------->DOF2       <---------- ----------->GT1      ---------->ID1                     <---------AHL20(2)              ------------   gaattgaaaataaggaaaatccttgttgttttgacgcaagagcgtttttcatgctctattttaagcccatcaaagctatgtctctctctcttacaatatt  19009400 ------GAMYB --------ANAC58 --------ANAC58                ---------->DOF2 ----MYB83 <-------MYC3--------->ZAT18 -------MYB46(3)     <-------MYC3 ----MYB46(1)        <-------MYC2 ----->AGL15         ------->MYC2                                  --------->YAB1 ------AGL15         ------->MYC4  --------->ARR11(3)              --------->AHL20(2) -------AGL3         ------->MYC3  <---------ARR11(3) ----------->GT1                           <---- >CBF      ------->MYC3<---------ZAT18                <---------ZAT6                           ------   tggttgccaaacacatggagacatgtgcgcatgtaaagctctcccatgaagtaatagagtaaaatgcaattaaaaacagcaaaactcacatatgtcataa  19009500                                                                                          ------>ZmHOX2a(1)                                                                                       ------>MYB83                                                      --------->GLK1(1)                ------>MYB46(1)                                                      <---------GLK1(1)            -------->P                                                   --------->LBD16                 ------->TEIL                                                 <---------LBD16                =====================            <-------GAMYB                      --------->ARR14(2)               =================HOX2a_HOX2a           <---------MYB46(3)             <-------GAMYB                         <------ZmHOX2a(2)          <---------RAP2.6(2)            <---------MYB46(3)                    --------->ARR11(3)          <---------ANAC46               ----------->GT1 <<<<<<<<<<<<<<<<<LFY  <---------ARR11(3)          <---------DEAR3(1)  <-----------GT1  <---------ARR14(2)   --------->ICU4<-----------GT1 -----AHL20(2)           <---------YAB1<-------GAMYB --------->ARR14(2)       --------->At4g35610 --->AHL20(2)<---------ARR14(2)    --------->MYB52(1)<---------ARR14(2) --------->ALFIN1 --------->TOE2(3)   aatttgattttggcggtttttgagtttatttttaacttcacggttgttaaatccggatttcacattggcaataagtggtgagatcaaccttccttatata  19009600                                                                                                   --                                                                                                   --                                                                                                   <-         ------>ZmHOX2a(1)                  --------->YAB1                            ----------->GT1         <----------DOF2              >>>>>>>>>>>>>>>>>LFY                           --------->DAG2<-  ---------->DOF2          --------->ANAC55(2)                 <---------AHL20(2)   ---------->DOF2<- ===============HOX2a_HOX2a<---------ANAC55(2)  <---------TOE2(3)       --------->GLK1(2)   ---------   ctactaaagtccttttccatctttctaatatgtgatttttctccaatgttaagttttatggagttttaattcagaatcaattgacaaaaagtagaaaagc  19009700      ------>ZmHOX2a(1)     <---------ANAC46     --------->TOE2(3) ----->MYC2 ----->MYC3                                    <---------ARR14(2) ------MYC3                                    <---------GLK1(2)                               ------ ------MYC2            <---------ICU4          --------->ARR14(2)                             ------- ------MYC4           <---------ATHB12    --------->TOE1(2)          --------->YAB1          <------- ->DOF2    <-----------GT1              --------->SPL7              <-------TEIL             --------   acatgttccttatatactactcaaatcatttcccatctttcgaacgtcggatttttctcaaatgttaagtttcataaacttccaactcaaaatcaactaa  19009800  Previous    Next  AGI:  At1g51260.1    Description:  LPAT3 (Lysophosphatidyl acyltransferase 3); 1-acylglycerol-3-phosphate O-acyltransferase. Identical to 1-acyl-sn-glycerol-3-phosphate acyltransferase 3 (LPAT3) [Arabidopsis Thaliana] (GB:Q9SYC8); similar to LPAT2 (Lysophosphatidyl acyltransferase 2), 1-acylglycerol-3-phosphate O-acyltransferase [Arabidopsis thaliana] (TAIR:AT3G57650.1); similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase (putative) [Limnanthes douglasii] (GB:CAA88620.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) Range:  from: 19007044    to: 19009309    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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