Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------YAB1                                                 --------->YAB1                                                 <---------ICU4                                                <---------YAB1                             -------->HAHB4                                              <---------ICU4                               --------->ATHB12                                             --------->ICU4                                --------->YAB1                                            --------->ANAC55(2)                        <---------AHL20(2)          <-----------RAV1(1)             <-----------GT1                              --------->AHL20(2)         <---------TOE2(3)           <---------ANAC58                               ----------->GT1       <---------AHL20(2)            <---------ANAC58                            --------->TOE2(3) -------->AtMYB61                    <---------ANAC46   --------->ANAC46        <---------ICU4  ----- ------->MYB46(3)            <----------DOF2<---------ANAC55(2)           --------->YAB1  <---------YAB1   taccaccaatttatgttgatgacttaattagcttttatggcgtattacttattatgacacaaaacaaaaaccactagcataaacattagttaattatagg  19000700                                         <---------ANAC55(2)                                         <---------ANAC58                                         --------->ANAC55(2)  <---------ARR11(3)                                         <---------ANAC58     --------->ARR11(3)                                        <-------TEIL          <---------ARR11(1)                                        <-----------------------TaNAC69(2)                                    <---------------AtSPL8    --------->ARR14(2)                                    <---------------AtSPL3    <-----------ARR10                                  <---------ATHB12           <---------CCA1(2)                         <---------GLK1(2)              <----------DOF2          --------->ANAC58      --------->WOX13(1)  <---------ZAT18          --------->ANAC58  <-----------GT1         --------->ZAT18           ------>MYB46(1)    ---------->DOF2      --------->ARR11(3)   <---------ANAC46<---------ARR14(2) ------>GT1              <---------ARR11(3) --------->ZAT18--------->YAB1     ------>MYB83   gaaaataaaagcacgagaacattactagattttccaatcaagtacgtgccctggtggactttcatatcttcttgtaaaccaaattccatccattcttgca  19000800                                                                                 ----------->HVH21                                                                                --------->LBD16                                                                               <---------ANAC55(1)                                                                               <---------ANAC55(2)                                                                               --------->ANAC55(2)                                                                <---------ARR11(3)         --------->ANAC58                                    ----------->HVH21           --------->AHL20(1)         --------->ANAC58                                  <---------ANAC58              <---------AHL20(1)     --------->ANAC58                         <-------GAMYB                          --------->ARR11(3)     --------->ANAC58                        <---------MYB46(3)             --------->YAB1          <---------ANAC46          <---------At4g35610     <---------ANAC58    <---------YAB1           <---------ANAC58      --------->ANAC46 <---------TOE2(3)             --------->ARR11(3)        <---------ANAC58  ---------->DOF2      <---------YAB1                <---------ARR11(3)       <----------------------   atccataagcgcaactgattacattttggttgaatgccttgacgatatacttgaatatcataccaatattttggtctagttccgtgactaagcaaacaat  19000900                                                        <---------TOE2(3)                                                        <---------TOE1(3)                                                       ---------->DOF2                                                    <----------DOF2                                                   ------>ZmHOX2a(2)               <------ZmHOX2a(1)                  <------ZmHOX2a(2)               --------->YAB1                    <---------ARR11(3)              ----------->GT1                    --------->ARR14(2)         <--------HAHB4                          <---------ARR14(2)             <------MYB83         --------->ATHB12 ------>ZmHOX2a(1)      --------->ARR11(3)             <------MYB46(1)         <---------ICU4   ===============================HOX2a_HOX2a           <---------TOE1(2)        --------->ICU4    ================================HOX2a_HOX2a         <--------P        <---------YAB1 <---------YAB1            --------->GLK1(2)      <---------ARR11(3)      --------->YAB1 --------->YAB1             <------ZmHOX2a(1)       --------->ARR11(3)     <-------TEIL<---------YAB1                <---------HSFC1(2)      --------->GLK1(1) -TaNAC69(2)  <---------YAB1                   --------->HSFC1(2) ----------->GT1                ----   accaagtttcatcattaggataattatcctcgaattcaatgacataagaaggatctttaaagtttagtttgtgaaatcttgtaggtttatcgtctatgct  19001000                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                --------->ATHB12                                                                              --------------->AGL15              --------->ICU4                  <---------YAB1                 <---------ANAC46         --------->ANAC58             --------->At4g35610                    <---------ANAC58         --------->AtLEC2             <---------ZAT2                    <-----------RAV1(1)   --------->RAP2.6(3)                --------->ZAT2         <---------YAB1  <---------ANAC58 <----------DOF2        --------->YAB1<---------At4g35610   <---------ARR11(3)<---------WOX13(1) ---->P  --------->ANAC58       <------ZmHOX2a(1)  <-----------GT1      --------->ALFIN1       <-----   accctttcggcatgcaatgttcagaataataccaggactcagctcgttatgaattactacatgatttttgcaatgtgttgcttgatttagctcaaaatgc  19001100                                                                                                  <--                                                                                                <----                                                                                            <--------                                                                                            ---------                                                                                           <---------ICU4                      <---------YAB1                                                       --------->ATHB51                    --------->YAB1                                                         --------->AHL20(2)                    <---------ICU4                                                         <---------AHL20(2)                --------->ICU4                                                            <---------YAB1               --------->AHL20(2)                                                         --------->ICU4            --------->TOE2(3)                                                           <---------ICU4           --------->YAB1                                      ---------->DOF2          --------->YAB1          <---------TOE2(3)                          <---------DAG2                    <---------YAB1    --------->ICU4 --------->ICU4                    <----------DOF2                 --------->YAB1 -  ----------->GT1<---------ICU4                   <---------ARR11(3)               <-----------TBP<-- --TEIL   <---------YAB1       <---------AHL20(2) --------->ARR11(3)  ------------>CBF <---------AHL20(2)   atagtagtaattaacataaaaattatgagataattcattttttggggtctaagaacttttttgaataaagacatcaatatgtagtatttataattatttt  19001200                                                     <---------AHL20(2)                           ---  ------------>CBF                                  --------->AHL20(2)                          ----- -------ANAC58                               --------->At4g35610                           >>>>>>>>>RAP2.2 -----ANAC46                            --------->YAB1                                   <---------ARR11(3) -AHL20(2)                              --------->ATHB12                                <---------CCA1(2) >AHL20(1)                    --------->GLK1(2)     <---------AHL20(2)              --------->CCA1(2) ---------->HVH21           <---------AHL20(2)--------->TOE2(3)--------->YAB1      <---------ARR11(3) -------ANAC58        ----------->GT1  <---------YAB1--------->AHL20(2)            --------->ARR11(3)   gtgtgacaatttttgttattcatttagtaaataatctttttatgattagcttaatttaaaaacaaacataaaaaacttggctatagatatatatctaaat  19001300                                                                            --------->YAB1                                                                        <---------AHL20(2)                      --------->AHL20(2)                               --------->AHL20(2)        ----     --------->AHL20(2)                              ---------->DOF2----------->GT1              ---- ------>AHL20(2)    --------->AHL20(2) <---------TOE2(3)           ----------->GT1          <-------- ------>GT1    ----------->GT1   <---------YAB1<---------TOE2(3)   <---------YAB1   --------->AHL20(2)   gtaaatataaaataacatggaaaaaaatatagattaccattaacatttttagattaaaagaaaatcaagatgataaaattagaattttaaatccatctca  19001400                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                --------------->AGL15                                                                         <---------AHL20(2)                                                                      --------->TOE2(3)                                                                    --------->ARR11(3)          <---------AHL20(2)                                        <---------ARR11(3)         <---------AHL20(1)   --------->CCA1(2)                    <---------CCA1(2)         --------->AHL20(1)  <---------ARR11(3)                   --------->AHL20(1)         --------->AHL20(2)  --------->ARR11(3)                   --------->ARR11(3)  ---------->DOF2  >>>>>>>>>ARR2 --------->YAB1                   <---------AHL20(1)              --- ----->ANAC58      >>>>>>>>>ARR1<---------YAB1                    <---------ARR11(3)            ----- ----->ANAC58     --------->ATHB12    --------->ZAT6 <---------------AGL15      <---------------AGL15 -At4g35610      <---------YAB1--------->AHL20(2)    ===========================================MADS_MADS   ctcaaaaagaatataatgtatgattgtataagatataataacactaggtagtatcatctatttggaaatatatcttaaatttctattaattgtttctatc  19001500                               <---------AHL20(2)                              <---------AHL20(2)                              --------->AHL20(2)                        --------->ANAC55(1)                        --------->ANAC46                     <---------ZAT14                     --------->ZAT14                                --------->AHL20(2)      <-------TEIL   --------->ZAT18                                <---------YAB1              ----- ---------->DOF2     <---------ZAT18                                <---------AHL20(2)      --------- ------>At4g35610--------------->AtSPL8<-------TEIL             --------->AHL20(2)          --------- ---->YAB1  <----------DOF2   <---------AHL20(1)            ----------->GT1   <---------AtLEC2  <----   atctaaagttcattctttctttgtacacttaatttttttgatacatcccactacaaaataagtagataatataaatgtttacatgtctctaggcatgaaa  19001600  Previous    Next  AGI:  At1g51230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51240.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 19000694    to: 19001102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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