Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <-------GAMYB     ------>ZmHOX2a(2)                                                                  =============     ===============================HOX2a_HOX2a                       <------MYB83      <------ZmHOX2a(2)   --------->ARR11(3)                                      <---------ALFIN1             --------->CCA1(2)   <---------ARR11(3)                                     ------>MYB83<------MYB46(1)  --------->AGP1 ---->ZmHOX2a(2)  <---------MYB46(3)                      ------>MYB46(1)              <---------ARR14(2) ----->ARR11(3) --------->LBD16                           -------->P --------->MYB59   --------->ARR11(3) ------ARR11(3)<---------ANAC58                          ----------->RAV1(1)           --------->ARR14(2) --->ICU4<---------ANAC58    <------ZmHOX2a(1)          --------->AtMYB61   --------->TOE1(3) ----YAB1<---------ANAC58 <-----------RAV1(2)          --------->MYB46(3)  --------->ZAT6     <------ >WRKY18(1)    <---------ANAC58             ------>ZmHOX2a(1)        --------->MYB46(2)<---------ARR11(3)   atcttgatcttgctcgtccgtggttgcatcaggagcaatattgctcctaatgctctcaccaacaccgtagtttggtaaccctagatgaagatccacagtc  18995400              ---------->DOF2            --------->ANAC58      <------ZmHOX2a(2)                                                           <-----------RAV1(1)     --------->ARR11(3)                                                       <---------ANAC58     <---------ARR11(3)                                   <------MYB46(1)     <---------DAG2     --------->ARR14(2)                                   <------MYB83        <----------DOF2     <---------ARR14(2)                                  <---------AtMYB61    <---------ANAC58    <------ZmHOX2a(1)                 <---------ANAC58<-----------RAV1(1)     <---------ANAC46 ==========HOX2a_HOX2a                <---------ANAC58<---------ZAT6         ----------------->AGL1 -----HVH21 --------->ANAC58         <---------MYB46(3) <--------P          ------>NtERF2   <--------   acaagaggatcatcaagaaagtttgaagagctaatttgatgggtgtccatgaaatagtgttggtcttgttgttcttggtgccttatggggcttaagctaa  18995500                                                                              ---------->ID1                                                                       <---------TOE2(3)       <-----------ARR10                                      <---------TOE2(3)       --------->ARR11(3)                                  <---------YAB1   --------->MYB52(2)       <---------ARR11(3)                                --------->ATHB12  <---------AtMYB61        -   <------ZmHOX2a(1)  <---------ANAC46            <---------YAB1    --------->ICU4                  < -At4g35610        --------->ALFIN1    --------->ALFIN1 <---------YAB1 <---------TOE1(3)         ----   gaagaggaagagcttctcttagtgggggtgagttaggggaagtggaagtggtatgagtatgattaatgtaattagggtttgtggtattagagtaatagta  18995600                                                                                     --------->ZAT2  <---------ANAC58                                                                   <---------ZAT2  <---------ANAC58                                    <-----------HVH21      <-------TEIL  <---------ANAC46                                  <---------YAB1          --------->GLK1(2) ------->P ----------->GT1                        --------->YAB1            --------->CCA1(2) ---------At5g28300                      <---------REM1(1)   <-------TEIL  --------->ARR11(1) ----->At4g35610            <---------ZAT14      <---------YAB1          ----------->ARR10   gctaccgtgagagttgtaaatgtaagagagagaagtggaatagttgaagctattatggtcacatccattgttgaagagattcgaacaagctggattagac  18995700                                                    ------->TEIL                                             <---------ABI4(2)                                 <------ZmHOX2a(2)  <---------ARR11(1)                       >>>>>>>>>TBF1  --------->YAB1<---------ARR14(2)                ---------->DOF2 --------->ARR11(3)  --------->ARR14(2)            <----------ID1      <---------ARR11(3) <---------CCA1(2)        <------ZmHOX2a(1) >>>>>>>>>TBF1   ---------->DOF2        ================================HOX2a_HOX2a<---------ARR14(1)                 --------->CCA1(2)   atgactctgaggagaagacaaagaagaagaagaagatcaagaataaaagcaccgtatctatatggtttgatgggtatgtgctagagagagatgagatgtg  18995800                               <---------YAB1                           <---------AHL20(2)                         <-----------TBP                         --------->AHL20(2)                       <-----------TBP                       <---------AHL20(2)                     --------->AHL20(2)                   <-----------TBP                 *TSS<---------AHL20(2)                 --------->CCA1(2)                --------->ARR11(3)               <-----------TBP                                -----                <---------ARR11(3)               --------->AHL20(2)                          <-------        --------->REM1(2)<---------AHL20(2)      <---------AHL20(2)  --------->ANAC55(2)     --------       --------->ALFIN1--------->AHL20(2)      <-----------TBP  ------->TEIL         ----------->HVH21     <---------ANAC46<-----------TBP --------->ALFIN1       ------->TEIL             ----------->TGA1   agtagtagtgtgtagatagatatatatatatatatgagtgtgtgagtgtatatatatagatgtatgtatatatgtaacgtttgagatgtgacgaagcggt  18995900              --------->YAB1           --------->YAB1        --------->YAB1      --------->SPL7                                                          -        <---------ICU4  <---------------AtSPL3        --------->TOE1(2)             <-----------GT1 -    --------->KAN4(1)  --------->DAG2               <---------ARR11(3)         ---------->DOF2      -   <---------YAB1    ---------->DOF2                --------->ARR11(3)        <---------ATHB12<------ ---->ALFIN1 <---------YAB1 <-------TEIL    <---------------------WRI1   --------->ANAC58     ------- --DEAR3(1)<---------ICU4 <---------SPL7   ----------->GT1    ---------->DOF2 --------->ICU4 <------- ->ALFIN1 --------->ICU4<---------------AtSPL8  ---------->DOF2          --------->ANAC58   <--------   ggaagattattcattatgataagaaaagggtacggagaaggtagagggagaaaagacctaagaagaaagttgaagaagcaataaagaaaccatcttcggg  18996000      <---------MYB46(3)      --------->ATHB12                                             <-------TEIL     <---------ATHB12                                             --------->CCA1(2)     --------->ICU4                                            <---------YAB1         <---------ARR11(3) -------->ANAC58                                    ------>ZmHOX2a(2)                 --------->ARR11(3) -------->ANAC46                                   <------ZmHOX2a(2)                 <---------CCA1(2) -------->ANAC58                                  --------->ARR11(3)              <---------YAB1 ---HSFB2a(2)                   <----------DOF2   <---------ARR11(3)             --------->AHL20(2) -->HSFB2a(2)    ------->TEIL ------->TEIL        --------->ARR14(2)             --------->AHL20(1) --LBD16<---------WOX13(1)  <---------ZAT18       --------->AGP1  --------->GLK1(2) <---------AHL20(2) -LBD16 <--------P   ------->TEIL  ---------->DOF2<---------ARR14(2)<-----------RAV1(2) --------->TOE2(3)   actcgcaatggttgatatgtatgtatgttatgcactttaaagtcaaatattagatccttgtacttaagattcagggtgagaaatattatatcttaaaatt  18996100                                                                              <------MYB46(1)                                                                              <------MYB83                                                   --------->ATHB12          <---------AtMYB61                                                  --------->ICU4    <---------ANAC58                                                  <---------YAB1    <---------ANAC55(1)                                                ----------->GT1     <---------ANAC58                                         --------->MYB52(1)         <---------ANAC46 <---------------      <------ZmHOX2a(1)                <---------MYB52(2)  ----------->GT1 <------ZmHOX2a(1)       --   caagaataggaattggagataaatatgtataatcgtgtttaactaacatatagtgattagaaagtttatttcgtgtaggatggtctcacatgaattggaa  18996200                                                       --------->ANAC55(2)                                                       <---------ANAC55(2)                                                  <---------ICU4                                                 <------ZmHOX2a(2)                                                <---------ARR11(3)                      --------->ANAC58                                           ----------->RAV1(1)                          --------->ANAC46                                 ---------->DOF2--------->ARR11(3)                      --------->ANAC58                          --------->ANAC58 --------->MYB52(1)              --------->AHL20(2) --AGL1 --------->ZAT6    --------->ANAC58--------->AtMYB61   <---------At5g28300  <------ZmHOX2a(2) ------->TOE2(3)     <----------DOF2     --------->MYB46(3)  <-----------GT1<---------AHL20(2)    <--   acatcaaataacacaagattaaactttcaaggaaaaaaagaaaaccaccagatcattacatatttactgtattgaaattttatggatcacaagcaatgcc  18996300  Previous    Next  AGI:  At1g51220.1    Description:  zinc finger (C2H2 type) protein (WIP5). similar to zinc finger (C2H2 type) protein (WIP4) [Arabidopsis thaliana] (TAIR:AT3G20880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21934.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 18993419    to: 18995817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version