Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>ZmHOX2a(2)                                                       --------->CCA1(2)                                                       <------ZmHOX2a(2)                      --------->O2                    <---------ARR11(3)          <---------ZAT18                      <---------O2                    <---------ARR14(2)          <-------TEIL               --------->ANAC58             <---------YAB1         <---------ARR11(3)               --------->ANAC58            --------->ARR11(3)      --------->ARR11(3)               --------->ANAC46   <---------AHL20(2)  --------->ARR11(3)  ---------->DOF2      ---------->ID1  <---------TGA1a      <---------ARR11(3) --------->MYB52(1)  --------->ZAT18 <---------ARR14(2)   --------->TGA1a<-----------GT1  --------->ARR14(2)<---------AHL20(2) --------->ARR10  <---------ALFIN1--------->AHL20(2)  --------->AGP1<---------RVE1(1) -----ANAC46 <-----------GT1     --------->AHL20(2)   <---------AGP1<---------CCA1(1)   gtagatttgtcttatttacgacactcgtgtccctatttatttcaatatcatatacagatctgccaaacagatattttaaagaagtgcatttgtattcatt  18980600                                                                 <---------MYB46(3)                                                                --------->ALFIN1                                                        --------->YAB1                               <-------TEIL        <---------AHL20(2)                          ---------->DOF2          <---------AHL20(1)               ----------->RAV1(1)                 --------->AHL20(2) <---------ANAC46     <---------     <---------DAG2     <---------AHL20(2)      <---------AHL20(2)<-------GAMYB       <---------DAG2     <----------DOF2  <---------YAB1          <---------YAB1  <-----------RAV1(1)     <----------DOF2  <-----------GT1 --------->TOE2(3)         <---------ZAT6<---------YAB1    --------->AHL20(2)      <   ttagtcactttatgtgccaacattattttaaagtccattcaatgtagtattattttatttataaatgtggttgtgcataaaaattctactttatttctat  18980700                              --------->AHL20(2)                             <---------AHL20(1)                           <---------AHL20(2)                             --------->AHL20(1)                       --------->AHL20(2)                             --------->AHL20(2)                    <------ZmHOX2a(1)                             <---------AHL20(2)                ---------->DOF2                            --------->AHL20(2)               <---------YAB1                  --------->ATHB12                         --------->YAB1 --------->AHL20(2)     <---              <---------AHL20(2)  <-----------GT1         <------ZmHOX2a(2)                --------->ANAC58          <----------DOF2   <---------AHL20(2)            ================HOX2a_HOX2a      --------->ANAC58 --GT1 ------->TEIL <--------P<---------AHL20(2)         --------->ARR11(3)          ---------->DOF2 ---------AHL20(2)<---------MYB46(3)                     <---------ARR11(3)         <---------AHL20(2)   atatacttgcatctttttaatggttgctaaattaatttacatcagtccctccttgatgagatcataaaaggattatttaaaaacatttaaagcgagccat  18980800                                         <----------DOF2                                       <---------YAB1                                      <---------ARR11(3)                                      --------->ARR11(3)      --------->TOE1(3)           <---------ICU4           <---------ARR11(3)      --------->TOE2(3)       ------>ZmHOX2a(1)            --------->ARR11(3)               <--------      <----------DOF2        --------->TOE2(3)            <---------GLK1(1)       --------->TOE2(3) <   <-----------GT1      <---------At4g35610               --------->GLK1(1)       --------->TOE1(3) - ------TOE2(2)          --------->At4g35610      <----------DOF2       <----------DOF2    --------->CCA1(2)   aggtttaactttaaaaaaacctgtttagcttcctaaaaattatctttaagactttaacagaaatcttcttctcctttgtttcaaccttcaagttacgaga  18980900                                                                                        ------>ZmHOX2a(2)                                                                                       <---------GLK1(1)                                                                                       ==============                                                                                       <<<<<<<<<GATA-3       ----------->TBP                                                                 <------ZmHOX2a(2)       <---------AHL20(2)               --------->DAG2                                 <<<<<<<<<GATA-2       --------->AHL20(2)              ---------->DOF2                                 <<<<<<<<<GATA-1     --------->AHL20(2)                --------->SPL7                                  <<<<<<<<<GATA-4     ----------->TBP                --------->ANAC58        ------>NtERF2             --------->ARR11(3)     <---------AHL20(2)  <---------HSFB2a(2)        *TSS --------->At4g35610          <---------ARR11(3)   ----------->TBP       --------->HSFC1(1)     --------->ARR11(3)                    <---------AGP1 --------->CCA1(2)       --------->HSFB2a(2) --------->ANAC58                        <---------CCA1(2) -ANAC55(2)              <---------HSFC1(1)  --------->ANAC58                   <---------ARR14(2) ---------ARR11(3)   <----------DOF2--------->ANAC58<---------YAB1       ---------->DOF2============= -------->ARR11(3)<-----------GT1  <---------------AtSPL3<---------At4g35610--------->At4g35610------   gagatatatatatatagtttttactttctagagagagaacgtaaggcaaggattttgtttgcagccatacttggagaaagcagaactagatctcttcctc  18981000                  <-----------GT1                 <---------ANAC46                     <---------ANAC55(2)             --------->ANAC58  <---------GLK1(1)  <---------ANAC58                     --------->ANAC55(2)             --------->ANAC58--------->ATHB12     <---------ANAC58                    <-------TEIL             <---------ANAC55(2)            ------>MYB46(1)                       <---------YAB1 <---        ----------->HVH21    <---------ICU4 ------>MYB83                      <---------ANAC58   <---      --------->TOE2(3)     --------->ICU4<---------MYB46(2)                  <---------ANAC58   ---- =HOX2a_HOX2a--------->ANAC55(2)       <-----------GT1                      <---------ARR11(3)  ----- =HOX2a_HOX2a----------->GT1<---------YAB1<---------MYB59                  <---------CCA1(2)    <---- >ZmHOX2a(1) --------->ANAC55(1)     <----------DOF2       <---------CCA1(2)--------->ARR11(3)-------   ttctcaatccttgacaagtaatacctcttcatgatttctctttaccaaacttgcgtttctcaaatctcttgacttatatatcttgtgatacgtctctaat  18981100                                             <---------MYB59                                <------ZmHOX2a(2) <---------AHL20(2)           --------->At4g35610 -----HAHB4                   <---------At4g35610                        ---------->DOF2 ------ICU4            --------->YAB1       --------->ANAC46          --------->ANAC46 ----->YAB1           <---------ATHB12    <-----------GT1             --------->ANAC58             <- ---->ICU4            <---------YAB1  <---------AHL20(2)              --------->ANAC58             <- -----ATHB12        ------>ZmHOX2a(1) --------->AHL20(2)    <----------DOF2--------->DAG2       ----- -->YAB1            ===================HOX2a_HOX2a       <---------TOE1(3)--------->DAG2    ---------   cattttttttttcttccaattcctatcatttcagatcaaattatatacctcactggtttaagctttgattccaagaaaagggaaatgaattctaacaact  18981200                                         <---------ALFIN1                               --------->ANAC46                                      --------->ATERF1(1)                               --------->MYB46(3)                                      --------->bZIP60(2)                             <---------DOF5.7(2)                                      <------NtERF2                                  <---------WRKY38(1)                                     ------>NtERF2                                   <---------WRKY45                                     <---------ATERF1(1)                             <---------WRKY12   <---------ANAC58                 --------->RAP2.6(2)                             --------->WRKY18(1)   <---------ANAC58            <----------DOF2                                    <------MYB83 --------ANAC58       ------->GAMYB <---------ATERF1(2)                           <------MYB46(1) --------ANAC58     ------>MYB46(1) --------->ATERF1(2)                --------->WOX13(1)------->GAMYB -->GAMYB           ------>MYB83   <---------RAP2.6(2)          <---------YAB1   --------->MYB59 <--- >MYB46(3)        --------->MYB46(3)--------->DEAR3(1)      <---------GLK1(2)    <---------AtMYB61  -   ggctcgcgttccctctatcaccaactcactcttctttgccgcctcacattcactcttcacaaaattctcatttcaatctaggtttggtcaacgacaatat  18981300                          --------->ZAT14                                            <-----------GT1                          --------->ZAT18                                       --------->AHL20(2)      <----------DOF2     <---------ZAT18           <-------TEIL                <---------AHL20(2) ------ETT(2)             <---------ZAT14       ------->TEIL                  <----------DOF2 -------->MYB46(3)<---------TOE2(3)       ------->TEIL              ---------->DOF2 --------->AHL20(2)   cgacaacccttttcaaaaccaaggtatgtgcactcacatttatgtatatgtatgttcatattcaaggccttaatgcaattcttttattaaacatatacta  18981400                                                                       <-------MYC4                                                                       <-------MYC2                                                                       ------->MYC3                                                                       <-------MYC3                                                                   <---------ZAT18                                                               --------->ATHB12  >>>>>>>>>ARR1      <              <----------DOF2                             --------->ANAC58       >>>>>>>>>ARR2 <-----         ---------->DOF2                                  --------->ANAC58     <---------YAB1 <------      <<<<<<<<<MYB98                                    ---------->DOF2------->MYC2        <-------TEIL     --------->TOE2(3)         <-------TEIL   ----------->GT1  <---------ICU4  <---------TOE1(3)    <    ----------->GT1         ----------->GT1   --------->AtLEC2<---------YAB1   <---------TOE2(3)<----   tttgctatgttaaaagcttttaaaaacgaagggttcaaatattaagacatgtaaaatcgaaagcatcattgcacatgttttaagattgttatgttcatat  18981500  Previous    Next  AGI:  At1g51190.1    Description:  PLT2 (PLETHORA 2); transcription factor. Identical to AP2-like ethylene-responsive transcription factor PLETHORA 2 (PLT2) [Arabidopsis Thaliana] (GB:Q5YGP7;GB:Q6PQQ7;GB:Q9SYC2); similar to PLT1 (PLETHORA 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G20840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21939.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18980952    to: 18984286    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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