Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->AHL20(1)                                                          <---------AHL20(1)                                                        <---------YAB1                                                        <---------TOE2(3)            <------ZmHOX2a(1)                      --------->YAB1          <---------TOE1(2)                        <---------ICU4----------->GT1          --------->YAB1        --------->TOE1(2)             --------->At4g35610 --------->ARR11(3)             <---------YAB1       <---------ANAC58      <---------At4g35610  <---------ATHB12                     --------->YAB1       <---------ANAC46  <----------DOF2          --------->ICU4 <---------ZAT6        <---------ICU4       <---------ANAC58  <---------DAG2   --------->REM1(1)   <-----------GT1         <---------ATHB12 <---------DAG2   --------->ICU4      <---------At4g35610 <---------ARR11(3)  <---------ATHB12 <----------DOF2--------->ATHB12--------->At4g35610--------->ATHB12           --------->ICU4   <----- >ARR11(3)<---------TOE2(2)  --------->At4g35610 <---------ARR11(3)     --------->YAB1--------->ICU4   gaacttttttcgtaggagtcattagcactttagcagcatcagcttcaccaaaatcattaagatattacagttaataagaaatgatgcaatgatgatactt  18842400                                       ----------->GT1                          <---------ICU4                          --------->YAB1                         <---------ATHB12         <----------DOF2----------->GT1                       --------->WOX13(1) <-----------GT1        --------->YAB1                --------->ANAC58      --------->DAG2            ----------->GT1                --------->ANAC58<---------------AGL15           <---------YAB1     ----------->GT1 <---------ATHB12---------->DOF2        --------->AHL20(2) -----DOF2  <-----------GT1     --------------->AGL15 ----------->HVH21 --------->AHL20(2)   ttgagagtggctaataactcgctatcaatcatgtcaatataaagtaacaagactttgtgacataaaatgataaaaaaaatatgtgccaatatagcatttt  18842500                                                                            --------->AHL20(2)            --------->WRKY18(1)                                             --------->YAB1           <-----------HVH21                         --------->DAG2      --------->YAB1          <------MYB83                              ---------->DOF2    <---------AHL20(2)          <---------ANAC46                      <---------TOE1(3)      --------->AHL20(2)          <------MYB46(1)                       <---------TOE2(3)--------->AHL20(2)         --------->MYB59                   ----------->GT1       <---------AHL20(2)         <---------MYB46(3)     ----------->GT1---------->DOF2  <---------AHL20(2)      ---------->DOF2     --------->ATHB12   <---------TOE2(3) --------->DAG2    <---------AHL20(2)     ----------->GT1 <-     <-----------RAV1(1)--------->DAG2   ---------->DOF2 ----------->GT1<---------AHL20(2)  ---------   agtagaattgttgggtcaagtagaataaggtgttcagaaaaaaaaaagttaaagtaaagtagtttatttattttttaataaaaattggcaaaaagaaagg  18842600                                                                              <---------TOE2(3)                                                                              <---------TOE1(2)                                       <---------HSFB2a(1)                    <---------TOE2(2)                                       <---------HSFC1(2)                 <---------YAB1          ---                                       --------->HSFC1(2)               --------->YAB1          -----                            --------->YAB1  <----------DOF2        <----------DOF2            -------                           --------->AHL20(2)     >>>>>>>>>WRKY18 <---------ICU4            ---------     ----------->GT1       <---------AHL20(2)    ----------->HVH21--------->YAB1           <---------YAB1 ---------DOF2   <----------DOF2       --------->HSFB2a(1)       <---------ATHB12    <---------At5g28300 ->DOF2          ------>ZmHOX2a(1)  --------->LBD16              --------->ICU4     <-----------GT1 <   gctatatttgtaaatagtcctttttagaattaataatccgaagcttcttttttgacagagcaatgcaatctttatcatcttaggttttacagtgtgatta  18842700                               --------->ANAC46                               --------->ANAC58                         --------->YAB1                         -------->HAHB4                        <---------YAB1                      <---------ICU4                   --------->YAB1       --------->ZAT6 --------->YAB1                      ---------->DOF2     <-----------GT1 <---------------AGL15              --------->ANAC46 ------>YAB1      <---------AHL20(2)                  --------->ANAC46 ------>GT1      --------->AHL20(2)                   --------->ANAC58                            <-- -->ICU4       --------->ARR11(3)          <---------TOE1(3)               *TSS                   --- >ATHB12   ---------->DOF2     --------->ANAC58       --------->ANAC58  --------->ANAC46       <----- ---------YAB1 <---------ARR11(3)          <---------TOE2(3)          ---------->DOF2       <<<<<<<<<TBF1   gtataattaacactaaagatttaataataatagaagcaagggtttaaggctaatacacacaaaagagcgtcttcaagcgatggccacaatcttcttcttc  18842800                                                                     ----------->RAV1(1)                                            --------->ANAC58        --------->DEAR3(1)                               <---------ANAC46      <---------DOF5.7(2)                          ------>MYB83      --------->ANAC58     --------->ANAC58                          ------>MYB46(1)  <---------LBD16       --------->ANAC46         ----------------->AGL1<---------ANAC58      --------->MYB52(1)         <-----------------AGL1<---------ANAC58    --------->DOF5.7(2)      <----------DOF2    <---------ALFIN1--------->STY1(2)       --------->ANAC58 -------At4g35610     <---------ARR14(2) --------->ZAT2       <---------ARR14(2)              ------>NtERF2 ------>At4g35610     --------->ARR14(2) <---------ZAT2<----------ID1------>NtERF2    <---------AHL20(2) ----At4g35610        --------->PCF2     <---------STY1(2)    --------->ARR14(2)      <-----------GT1   tgcttaagctttccttctcaggcagacccacttgcttgaaactagctcggaacgataacgacaaaattcgccaccataaaccctatttttaatctccgac  18842900                ---------->DOF2              ------>ZmHOX2a(1)   <-----------TGA1   <-----------HVH21  --------->TGA2(1)  --------->ETT(2)  <---------bZIP60(1)    <--------P                                                                 -  <---------TGA2(1)<---------ZAT2  --------->ZAT18                                       <---------ALFIN1  --------->bZIP60(1)  <---------ANAC46         --------->ALFIN1             ------->GAMYB      <----  <---------ETT(2) --------->ZAT2  <---------ZAT18                  --------->ANAC46  --------->ANAC46   tctgtcgtcacttctccttcaagctgggtagattaagttcgcttatggccatgggggtttctcttacttcccacaataaccctcttcttcgccacttatc  18843000                                                                             <---------SPL7              <---------GLK1(1)                                            <------NtERF2          --------->LBD16                                                 ------>NtERF2          ------>ZmHOX2a(1)                                               <-----------HVH21         <---------LBD16                                                 <---------ANAC46        ----------->RAV1(2)                                         <---------ANAC58    ------>ZmHOX2a(1)                                         ------>ZmHOX2a(1) ----->ZmHOX2a(1)        ------>ZmHOX2a(1)       --------->ANAC46   <---------ANAC58 -------GT1<---------TOE1(2)------>ZmHOX2a(1)  <---------ALFIN1 <----------DOF2            <---------TOE2(3)   tccttcctcttcctgggtttctcgttcctcctctcgcctctcttcttctccactcccttccttcctctttccttgccgtcgaacccttcttcaaaggttt  18843100                  <---------TOE1(2)                  <---------TOE2(2)                                                              <---               <---------ANAC58                                                            <---------WOX13(1)               <---------ANAC58                                                           <---------ANAC58            <----------DOF2                                                               <---------ANAC58           <---------DAG2                                                                --------->ATHB12        <-----------GT1     <---------AHL20(2)                                        <---------ANAC58      <-----------GT1    ----------->GT1         <---------YAB1                       --------->ANAC55(2) <---------DAG2<---------ANAC46          --------->ZAT14                              <---------ANAC58 <----------DOF2<---------LBD16          <---------ZAT14                            <-----------GT1   gcactttttttcacctttcgtgggttttagtaaattttgagactacacttgattatcgattactatgctctgttctatgctaaattttacttgattgtcg  18843200                                                                     --------->ANAC55(2)                                                                     <---------ANAC58                                <---------YAB1                       <---------ANAC58                            --------->TOE1(3)                      <-----------GT1                            --------->TOE2(3)           --------->ANAC58         <-------GAMYB      <---------DAG2              --------->ANAC58        <-----------RAV1(1) <---------MYB59        <---------At4g35610               <---------At4g35610 ------MYB52(1)          <-----------GT1           --------->At4g35610    <---------YAB1   ttactatgctctgttgtatgctcaattttaccttatttttgactaatttgctctgctcaagcctcagttttacttgattatcgattaagctactctgtta  18843300  Previous    Next  AGI:  At1g50840.1    Description:  POLGAMMA2 (polymerase gamma 2); DNA binding / DNA-directed DNA polymerase. similar to POLGAMMA1 (polymerase gamma 1), DNA binding / DNA-directed DNA polymerase [Arabidopsis thaliana] (TAIR:AT3G20540.1); similar to DNA polymerase [Nicotiana tabacum] (GB:BAE45851.1); similar to DNA polymerase [Nicotiana tabacum] (GB:BAE45850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39430.1); contains InterPro domain DNA-directed DNA polymerase, family A; (InterPro:IPR001098); contains InterPro domain DNA polymerase A; (InterPro:IPR002298); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); cont Range:  from: 18842775    to: 18848227    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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