Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                                                                  <--                                                                                           <---------At4g35610                                                                                        --------->LBD16                <------MYB83                                                          ----------->RAV1(2)                <------MYB46(1)<---------DAG2                                      ------>ZmHOX2a(1)               --------->MYB59 <----------DOF2                              <---------ICU4 --------->At4g35610 >TEIL --------->AtLEC2--------->ANAC46                   <----------DOF2   <---------GLK1(2)   <----   tctccatccatgctaatttggttaccagacagactttatcgttcttaatcttcttccattctttctctagcttcgccataatctccttccctgagctatc  18838100             --------->ANAC58    <------NtERF2                                                           --------->ANAC58   ----------->GT1                              --------->MYB52(1)          --------->ANAC46   ------>NtERF2                           ----------->RAV1(1)              --------->ANAC58 --------DEAR3(1)                       --------->ANAC58               <---------ANAC58 ------->ANAC46                         --------->ANAC58               <---------ANAC58     <-------- -------LBD16--------->ANAC58         ---------->DOF2            <---------YAB1 --------->MYB52(1) -----REM1(2)--------->ANAC46   --------->GLK1(1)      <---------REM1(2)  <---------ALFIN1  <--------   cacggtggcaaaaacaggcaaacccaaaacagagaaacccaaaagcaccataacgtcttcaagggttatagttgcttcaccccaagggaaaatgaaggtt  18838200                                       <------ZmHOX2a(2)                                       --------->CCA1(2)                                      --------->AGP1                                      <---------AGP1                                      <---------ARR14(3)                                      --------->ARR11(3)                                      <---------ARR11(3)                                      <---------ARR14(2)                                       <-----                                      --------->ARR14(2)                                       <-----                                      --------->ARR14(3)                                      <------                              --------->LBD16                                 --------->At4g35610   - -TOE1(3)            --------->At4g35610       <----------DOF2   <---------REM1(1)           <------- -TOE2(3)            <---------At4g35610------>ZmHOX2a(2) XXXXXXXXXXXXXXXXXXXX>MIR857       <--------   ttagtgtctggacaccatttctcagctaaacccagaacaagatctgtgtctttagggattttgtatgttgaagctataacagcttcaaaaatcccagctt  18838300                                                                             <---------GLK1(2)                                                                           --------->LBD16                                                                         <---------LBD16                                                                        ------->GAMYB                                                                      ------>MYB83                                                                      ------>MYB46(1)                                                                      -------->P<---------AHL20(2) -----DOF2    --------->AtLEC2                                      --------->AtMYB61 ----DAG2   <---------ANAC58                                   <---------HSFC1(2) ---GLK1(2) <---------ANAC46                                   --------->HSFC1(2)<---------AHL20(2) -------------->AGL15                                         <---------GLK1(1) --------->AHL20(2) --ZAT2     <---------ANAC58                      <---------DAG2    <---------MYB111(2) -TOE1(2)  <-------TEIL       <-----------GT1     <----------DOF2   <---------ALFIN1         --------   ttctccaaatgggttcgtgcaaagatgccatttttctagcccaagacttgaactttttgtttggaaacctccaaccccagaatttaatactcgtagaaag  18838400                   <---------At4g35610              ---------->DOF2        <---------ZAT14                  --------->YAB1        --------->ZAT18        --------->GLK1(2)                <------ZmHOX2a(1) <----------DOF2   --------->At4g35610 --------->GLK1(2)     <------ZmHOX2a(1) -->DOF2--------->ZAT14       <---------GLK1(2)   --------->WOX13(1)--------->CCA1(2)       <--------   agcctttaagtgaacagaaagagctgaagaacgattctgacaatcttcaaatccatcaatggaggaggagagacaaggttttgaaagatgggttcttttg  18838500                                                                    <----------ID1                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)                     ------>NtERF2                   <---------ARR14(3)                    --------->ANAC58                 --------->ARR14(3)                    --------->ANAC58                 --------->ARR11(3)                 --------->ANAC58              --------->SPL7                         --------->ARR14(2)                 --------->ANAC58     --------->ZAT14--------->ANAC46                 <---------ARR11(3)          <-------TEIL --DOF2     <---------SPL7               <----------DOF2 ------------>CBF       --------->CCA1(2)   ctactactgttctcggtacgagacgccatgagctcttctctctcttttcaacaaggatcttcaattcatggagacgaagaagattcaaacaagacaaaat  18838600                                                           --------->GLK1(2)                 <-----------GT1                         --------->HSFB2a(1)                <-----------GT1                          --------->HSFC1(2)       <---------YAB1          ------>ZmHOX2a(1)                     --------->ANAC58                <----------DOF2       ---------->ID1                           --------->TGA1a       <---------TOE1(2)    <----------DOF2            <---------TOE2(3)--------->ANAC46<-----------RAV1(1)--------->YAB1    <---------DAG2         <----------DOF2      --------->ANAC58=================RAV   <---------ANAC58        ===============================bZIP_DOF   <-----------RAV1(2)        <----   <---------ANAC58      ----------->GT1        ===========================================bZIP_DOF -   gaaatgcttttcctattttttcccttgtggtttaatgtttgtttgaactcaagtcacgaagaatccatgttgcaggtttgtgctataatggaatacttct  18838700                                               --------->ARR11(3)<---------AHL20(2)                                          --------->AHL20(2)     --------->AHL20(2)                                         <---------YAB1      --------->AHL20(1)                                        <---------AHL20(1)   <---------AHL20(1)         --------->AHL20(2)           --------->AHL20(1)     --------->AHL20(2)         --------->YAB1              --------->YAB1        --------->AHL20(1)     --------->AHL20(2)              --------->AHL20(2)    --------->ARR11(3)              --------->AHL20(2)     <---------AHL20(2)            --------->AHL20(2)      <---------AHL20(1)            --------->AHL20(2) <---------YAB1                 --------->AHL20(2)        --------->YAB1                 --------->AHL20(1) ------DOF2 <---------ICU4   ----------->GT1   <-----------GT1  <---------AHL20(2)      --------->YAB1 ----------->CBF          ---------->DOF2<---------AHL20(2)<---------ARR11(3)      ----------->GT1   tttacaattaataaaaattcccattagtaaaagataaaataatattatttatcttgtcaaaaatattttaaatgtcttatcagcctggaaaaataatatg  18838800             --------->TOE1(3)             --------->TOE2(3)           <---------TOE2(3)          <-----------GT1       --------->YAB1     <---------YAB1   <---------AHL20(2)   <--------HAHB4                                                                                   <   --------->YAB1                                                                                   -   -------->ATHB1                                       <---------ANAC58                            -   -------->HAHB4                                       <---------ANAC58                           <-   --------->ATHB51                       --------->ATHB12                                         <-   <---------ICU4                        --------->ICU4 <---------ANAC46                           ==  <---------ATHB51              --------->At4g35610 <---------GLK1(1)                  ----------->HVH21  --------->ICU4              --------->YAB1    --------->HSFB2a(2)                  <---------ANAC55(2)  <---------YAB1         --------->AHL20(2)     <---------HSFB2a(2)   <----------DOF2--------->ANAC55(2)   tgtaattattaataacgttagaagaaaaaaaatcagaagaaaaatgatttatagaaatgcgtttacaattttcttttgtttcatattatgtgataggcat  18838900                    <---------------AGL15                    =================================================================================                 <---------WRKY18(1)                --------->WRKY38(1)             -------->ATHB1             --------->ATHB12             <---------ICU4            <---------ATHB12            --------->ICU4            <---------YAB1          <---------GLK1(1)                                              --------->AHL20(2)          --------->GLK1(1)                                           <----------DOF2            <--- <---------MYB59--------->WRKY12                                 --------->HSFB2a(1)            <---- ---------------AGL15 ------>MYB46(1)                           --------->SPL7               -------- ---------------->AG<---------MYB59                            --------->MYB52(1)         --------->MYB52(1) ---------------->AGL1--------->MYB52(1)                       ------>MYB83              <-----------GT1 ----------------AGL1 ------>MYB83                             ------>MYB46(1)        <---------YAB1 ----------------AG----------------->AGL1                     <---------SPL7  --------->TOE2(3) ----- ===================================MADS_MADS             <-----------GT1<---------AHL20(2)<---------LBD16   ttaccaaaatggaaatcattgaccaaacagagaaactagaaattgagtcaaatttcttataaaccgaacggtcttttaattcttaaatatgataccggac  18839000  Previous    Next  AGI:  At1g50820.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38989.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 18836943    to: 18838529    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g50830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51538.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68396.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 18838939    to: 18841610    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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