Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ARR14(2)          <---------ANAC46          <---------------AGL15      --------->ARR14(2)                     <---------At4g35610      <---------ARR14(2)                     --------->At4g35610     ---------->DOF2      <---------GLK1(2)    --------->RAP2.6(3)<---------GLK1(2)   --------->AtLEC2 --------DOF2<---------ARR14(2)              --------->ZAT2    <-------TEIL -->LBD16<-----------------AGL2              <---------ZAT2 <------MYB46(1) --ANAC46<-----------------AGL3       ---------->DOF2       <------MYB83 -LBD16--------->GLK1(2) ----------->HVH21  ------>NtERF2 --------->ALFIN1--------->RAP2.6(2)   tttttagggattctgtatatggatgccatgactgcttcaaaaatgccagcttctctccaagtgggttcatgtaaagcagccatttctatagcccaagact  18815600                        ------->GAMYB                       <-----------------AGL1                      ------>MYB46(1)                                                   --------->ANAC58                      ------>MYB83                                     --------->At4g35610               --------->ARR14(2)                                    <------ZmHOX2a(1)  --------->ANAC58               <---------ARR14(2)                           --------->ZAT14<---------ARR14(2)              <---------CCA1(2)                             <---------ZAT14--------->MYB52(1)  <----------DOF2     -------->P<------ZmHOX2a(1)        <---------ANAC46  --------->ARR14(2) -------   cgaactttgtgtttgcaaatctccaaccccagtaggaaacactcttagacagagcgtttgagtgaagagaaggagcagaacggttttgacaaggaagcat  18815700               <---------TOE2(2)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR14(2)     <---------ARR11(3)     --------->ARR11(3)     <---------ARR14(2)    --------->At4g35610    <---------At4g35610                             <---------MYB52(2)          ---------->DOF2    <- -->YAB1       <---------TOE1(2)               ----------->GT1         >>>>>>>>>TBF1            -----   agcttcagatcccttcataggttttcaaagatgagtttttgttttcagagggaaacaaacaaatgctggagaagaagaagatgaaagagagagtttttgt  18815800                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                 --------->TOE2(3)              <----                                                                <---------YAB1                  <----                                                  ----------->GT1--------->YAB1                 <----      <---------AHL20(2)                         <---------TOE2(3)                              -----     <---------AHL20(2)                          <---------TOE1(3)                              <---- ---------DOF2       ------->TEIL        ---------->DOF2     --------->ICU4<------ZmHOX2a(1)    <---- ----->ID1<---------AHL20(2)         ---------->DOF2  ---------->DOF2   <-----------RAV1(2)     <----   tcttttttttatttttttttttgaacctttgaaaagtttgaaagaaagtctaaggtaaaagaaattatgttaatgcaggagctagaaatgtaacagttgc  18815900   <---------TOE1(3)   <---------TOE2(3) -------DOF2 ----------->AGL15 ------------AGL15 ------DAG2    ----------->GT1 -----ANAC46   --------->ANAC58                           *TSS     <-----------HVH21 -------------AGL2                                     ---------->DOF2                    --------->GLK1(2) -----ANAC58   --------->ANAC58                       <---------AHL20(2)                  --------->ARR11(3) -------------AGL3                                 ------->TEIL <---------ANAC55(1)       --------->ARR14(3) ------------>AGL3                              --------->ANAC58<---------ANAC58          <---------ARR14(3) -----ANAC58 ---------->DOF2                    --------->ANAC58<---------ANAC58 ------>MYB83 -------------AG          ----------->GT1  --------->ANAC58     <---------O2 ------->TEIL <---------ARR11(3) -------------AGL1<-----------GT1          --------->ANAC58     <---------ANAC46 ------>MYB46(1)   tttttaaggtaattggaaagtaactatttagtaaaatgtctcatcaaggcatgcatttaaagtgagccgtgtcatgtcgaacctatcaccaaaatcttgt  18816000                                                                                          -------->ATHB1                                                                                          --------->ATHB51                                            <-----------ARR10                             -------->HAHB4                                           ------>MYB46(1)                                --------->ATHB12                                      >>>>>>>>>>WRKY43                                    <---------ICU4                                      >>>>>>>>>>WRKY38                                    <---------AHL20(2)                                      >>>>>>>>>>WRKY26       --------->YAB1              --------->ICU4                                     --------->WRKY38(1)    <---------YAB1               <---------YAB1             <------MYB83       --------->LBD16   ------->GAMYB                          <---------ATHB51             <------MYB46(1)  <---------LBD16<---------ATHB12-------->HAHB4          <---------MYB52(1)            --------->MYB59  --------->MYB52(1) -------->P  --------->ICU4         ----------->GT1    ------------>CBF    --------->YAB1<-----------GT1       <---------ATHB12    --------->GLK1(2)   --------->ANAC46    <---------ATHB12    ------>MYB83   ------>MYB83          <---------ARR11(3)   --------->ANAC58  --------->WOX13(1)  <---------MYB59  ------>MYB46(1)       --------->ARR11(3)   --------->ANAC58------------>CBF<------------CBF     <---------MYB59        --------->RVE1(1)   --   aaaccaggcaatgttaggttttccaatcacaaaccggaattgaccaaatcaacccaaacctaatgataaaactaatataaaaaatctgttaattattgat  18816100                                                                            <---------YAB1                                                                           <-----------GT1              <-----------GT1            <---------YAB1          --------->YAB1  --------->YAB1               --------->ZAT14                   --------->ATHB12  <---------ICU4               <---------ZAT18                   <--------HAHB4  --------->ATHB12             <---------ZAT14                   <---------ICU4  <--------HAHB4            ---------->DOF2                     <---------ATHB12 <---------ATHB12        --------->TOE1(3)                    --------->WOX13(1)   <-------GAMYB ------->WOX13(1)        --------->TOE2(3)            --------->YAB1      --------->YAB1   tcaatcatttgatatatcacctcttaacctcagagcacaacttctcattgtatttctcatcatccaatcatttgaattatcagtctgttacattactcat  18816200                                                   <---------ICU4                                                 <---------ARR11(3)                                         ------->TEIL                             <---------YAB1--------->TOE2(3)  <---------ZAT18          <---------ZAT18--------->ARR14(2)--------->TOE1(3)  --------->ZAT18    --------->YAB1  --------->ZAT14      -------->P--------->YAB1--------->ANAC46                 ---   <---------YAB1   <---------ZAT14  --------->TOE2(3)        --------->ZAT14        <----------DOF2   cgacgattatagtctacttctctgcagtattttcatttacatcaacctcaaaatcatcacaaattgcactcgacttcatgtggttttctttgcagttcta  18816300                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                               --------->ANAC58                            --------->YAB1                                      <----------DOF2                                      --------->AHL20(2)                  --------------------->WRI1   --------->ANAC58       <---------ALFIN1    <---------YAB1      <---------ZAT14                 <---------DAG2                -------->P       ----------->GT1      --------->ZAT14           --------->ANAC58                   <-----------GT1  <---------YAB1   ------>ZmHOX2a(1)            --------->ANAC58               ------>ZmHOX2a(1)    <---------TOE2(3) ------>YAB1<----------DOF2     --------->ANAC46          --------->YAB1            <---------TOE1(3)   tcatcctcttcactcttttgctctgtttttatcgaagcaactttttgacaaggccctgaatcatcctatctaccacttgcaatcttatggttataatata  18816400                                                                        <---------ZAT14                                                                        --------->ZAT14 ----YAB1<----------DOF2                                      --------->ZAT6 -->AHL20(2)                                            <---------HSFB2a(2)                     ----- ---AHL20(2)                                            <---------HSFC1(1)                      <---- -->AHL20(1)                  <----------DOF2           --------->HSFC1(1)              --------->At4g35610 ---AHL20(1)             <-----------GT1                --------->HSFB2a(2)             <---------At4g35610   atacacagtcgcttttgtaacacctatatacactttgacttgaaaacttctcacatttctagaaacactaaaactgcagttaacaacttaagctccattg  18816500  Previous    Next  AGI:  At1g50750.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38989.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 18812852    to: 18815958    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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