Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->O2                 --------->ANAC55(1)                 --------->ANAC58                 --------->ANAC55(2)                 --------->ANAC58                 <---------ANAC55(2)                 --------->ANAC46                 ----------->GT1           --------->DAG2    <---------ICU4     --------------->AGL15 ------>DOF2   <-----------GT1            ---------->DOF2 --ID1 <-----------GT1 <---------------AGL15                  <----------DOF2           <---------DEAR3(1)   aaagaagaattactatatcacgttacaaaatttagacagactctaaaagcgaccttcatcgactcttttcaatcggccataacattgagggaggctctat  18785200               <---------At4g35610               --------->At4g35610           <----------CDC5                        --------->ARR11(3)          --------->ZAT2                          <---------ARR11(3)          --------->At4g35610                     <---------ARR14(2)          ----------->RAV1(2)                    --------->GLK1(1)                              -----          <---------At4g35610                    <---------CCA1(2)                     ------>NtERF2        <---------RAP2.6(2)              <------ZmHOX2a(1)                --------->ZAT18    --------       <---------At4g35610           <---------ANAC46           <---------ANAC46       ----------->RAV1(1)    ---------->DOF2                  <---------ANAC58           <---------O2          <----------ID1   <---------ATHB12 --------->YAB1   <---------ANAC58       <-----------HVH21        --------->At4g35610   ttcaaatgaagcggctgagctatcagggtgtcatattttgcgaggactcgaatatcttatatggtcacttggagagggcaatagaacagcgccaaaaatc  18785300                                         <---------YAB1                                        --------->ARR11(3)                                        <---------ARR11(3)                                       --------->YAB1                                       <---------ICU4                                       -------->HAHB4                                      <---------YAB1                                      --------->ICU4                                 --------->CCA1(2)                                                 <-                                --------->ARR11(3)                                                <--                                <---------ARR11(3)                                                <--      <-------GAMYB          <---------TOE2(3)                                                    <--     <---------MYB46(3)     ---------->DOF2                                          <------ZmHOX2a(1)   ------->TEIL        <-------TEIL --------->YAB1<---------TOE2(3)       --------->DOF5.7(2)    <--- ---->YAB1        <---------TOE2(3)<---------AHL20(2)    <---------YAB1--------->LBD16           ---- ->YAB1<---------MYB52(1)--------->TOE2(3)<---------ICU4<---------ANAC46 <----------DOF2         ----   atatggaccgttggaaattcaaggatacattaaagatataatgatcatggcaaaggtttcttatagatttatgcgcgttaatgggaaggagaacacaatg  18785400                                                                                               ------         --------->At4g35610                                                                   ------ <-------TEIL                          <-----------ARR10                                       <----- --------SPL7                          <---------ARR14(2)                                     ------- -------ANAC58                         --------->ARR14(2)                --------->ARR11(3)   <------ -------ANAC46                         --------->ARR11(3)    --------->DAG2            ----------->GT1 -------ANAC58                         --------->GLK1(2)<---------AHL20(2)           <---------ANAC58 ------------AtSPL8               ----------->GT1       --------->AHL20(2)      <---------ANAC58   -- ----------->AtSPL8      ----------->RAV1(1)   ---------->DOF2       ---------->DOF2 <---------ANAC58 ----------->AtSPL3     <----------ID1 <---------ARR11(3)   ---------->DOF2     <---------ANAC58 <---   gcgtacatattagctaagaaggctagacaacaaaactggaaaatctggccaaagaaaattaaaaaagtcacaaaagaaattgacttgtcttgttaaaaaa  18785500         XXXXXXXXXXXXXXXXXXXX>MIR403                              --------->ANAC46       --------->AHL20(2)                                      <------ZmHOX2a(2)       <---------AHL20(2)                          <---------RAP2.6(3)      <---------AHL20(2)                      --------->DAG2  <---------ARR11(3)      --------->AHL20(2)                ----------->RAV1(1)   --------->ARR14(2)      <---------AHL20(1)           <---------At4g35610        --------->ARR11(3) ------------>CBF                  <---------ZAT2 --------->RAP2.6(2) --->AHL20(1)                      --------->At4g35610        <---------ARR14(2)                  <-- --->AHL20(2)                      ----------->RAV1(2)       --------->GLK1(1)                    <-- ----AHL20(2)                      --------->ZAT2 --------->DEAR3(1)                          <------ -->AHL20(2)                       =================RAV<----------DOF2     <----------DOF2   -------- ---AHL20(2)                   <---------ALFIN1  --------->DEAR3(2)  <---------ALFIN1       --------- --------->GT1              --------->ANAC46 ---------->DOF2 <---------GLK1(1)  <-----------GT1<----- ---------CBF      --------->MYB46(3) ------>NtERF2------>NtERF2------>ZmHOX2a(2) *TSS <<<<<<<<<TBF1   attgtcaatttaatttcacgaacaaactaaactccacagctgccccaaaaagccgacctttagagatccctccactactttgtaacttcttcttccccaa  18785600                                                                             <-----------GT1                                                                           <---------WOX13(1)      <---------GLK1(2)                                                  --------->ATHB12    --------->ICU4                  <--------HAHB4                     <---------WOX13(1)       -----    <---------YAB1                  --------->ATHB12                  <---------AtLEC2        ------>ZmHOX2a(1)  --------->YAB1                    --------->YAB1                    <---------ANAC58        <------ -------DAG2                        <---------ICU4                    <---------ANAC58       -------- --------DOF2                      <---------ATHB12              <---------ICU4          --------->WRKY12 ---ALFIN1                       --------->WOX13(1)            --------->ARR11(3)      <-------GAMYB ->LBD16                       <---------ATHB12                <---------ARR11(3)     --------->MYB52(2) >HSFB2a(2)                   --------->ANAC46                 <-----------ARR10      <---------MYB46(3) ----ALFIN1             <----------DOF2                       <---------CCA1(2)      <-------TEIL   -   cttttcatgattcttctgcaattcaactttccaaacaatcatttgttctaaatctcttaaacacaaatctttgcttgattaaccaagttcgttgtcctta  18785700                                       --------->MYB46(3)                                      --------->ANAC58                                      --------->ANAC46                                      --------->ANAC58                  --------->ANAC55(2)------>MYB83  <------ZmHOX2a(2)                  --------->ANAC46   ------>MYB46(1)       <---------REM1(1) <---------HSFB2a(2)      <---------ARR11(3) ---->MYB52(2) --------->ARR14(2)   <---------ALFIN1          <---------ANAC58 ---MYB52(1)   <---------ARR14(2)  --------->MYB46(3)    --------->TOE2(3)                        --- ->TOE2(3)  <---------ANAC46    <-----------GT1   --------->ARR11(3)                   <---------GLK1(2) -------->At4g35610      --------->HSFB2a(2)  ---------->DOF2 <---------ANAC58 <---------CCA1(2)  <--   gttgctgaattgtagcctatacgtcttctagtataaacccacccaaaaaaaagatcaaacctttgcttatttctctgttttatatccctgattctctgca  18785800                   <----------DOF2                  ------>ZmHOX2a(2)             <-------TEIL          <---------HSFB2a(1)          --------->HSFB2a(1)                                         --------->MYB52(1)         --------->DAG2          <---------ANAC58              ---------->DOF2       ---------->DOF2           <---------ANAC58           --------->ANAC58                        -     --------->ANAC58            ----------->GT1            --------->ANAC58                     ----     --------->ANAC46            <---------ANAC46         ---------->DOF2                        ----     --------->ANAC58      <---------LBD16    <---------At4g35610    <---------SPL7      <---------ANAC58 ------>ARR14(2)<---------ARR11(3)    <---------RVE1(1)--------->At4g35610               <---------ANAC58 -------ARR14(2)--------->ARR11(3)   <---------ARR11(3)<---------At4g35610           --------->GLK1(1)   aattttcacgaaaggttcgatctttggtctctgggtcgtgatattttgagcttatttagctaaagcaaagacgaacgggcaatggggaattgcttagcca  18785900                                                                                   <-------TEIL                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 --------->AGP1                                                                               ----------->ARR10                                                                           ------>MYB46(1)                                                                           ------>MYB83                                                                          --------->ANAC46                                                                         <---------MYB111(1)          <------MYB83                                                   --------->MYB46(3)          <------MYB46(1)                                                --------->DEAR3(1)         <---------AtMYB61                                               <---------MYB111(2)         <---------MYB46(3)                          <---------HSFB2a(2) <---------MYB55(2)        <-        <---------WOX13(1)                           --------->HSFB2a(2)--------->ANAC58          ---       <---------ARR14(2)                   --------->At4g35610         --------->ANAC58        -----       --------->ARR14(2)                <------ZmHOX2a(2)             --------->PCF2         <------    <---------ANAC55(2)                  =================================HOX2a_HOX2a         -------    --------->ANAC55(2)                 --------->ARR11(3)         ======================HOX2a_HOX2a   <---------LBD16                  ---------->DOF2<------ZmHOX2a(2) --------->At4g35610      ------- -------->CCA1(2)               ----------->GT1    =======================HOX2a_HOX2a        -------- ----->ANAC58           ----------->RAV1(1) <---------At4g35610    <------ZmHOX2a(1)         -------- ----->ANAC58        --------->AtMYB61  <---------ARR11(3)         =======================HOX2a_HOX2a   agaaatacggattggtgatgaaaccacaacaaaatggtgaaagatcagttgagatcgagaacagaagaaggagcacccaccaagatccgtctaaaatatc  18786000                                                                                 <---------TGA1a                                                                                 --------->O2                                                                                 ====================                                                                                 ----------->GT1                                                                                 <---------O2                                                                                 <---------ANAC55(2)                 <---------ALFIN1                                                <---------ANAC46     --------->ANAC58        <---------ARR14(2)                          --------->SPL1(1)     --------->ANAC58    <---------ANAC46                                <---------SPL1(1) --------->LBD16 --------->DEAR3(1)                                   <-----------------------TaNAC69(2) --------LBD16   --------->AtMYB61                                    --------------->AtSPL3 ------>MYB52(1)--------->MYB46(3)                     <---------At4g35610      <-------------------- ---->MYB46(3)--------->AtMYB61                        --------->At4g35610--------->SPL7 ---ARR14(2)  ------->GAMYB<------NtERF2            <---------At4g35610 <---------SPL7 -->ARR14(2) <---------MYB55(2)                  --------->At4g35610------------------>SPL14 -->ARR11(3) --------->MYB46(3) --------->TOE1(2)<---------At4g35610--------->GLK1(2)              <- ->RVE1(1)  -------->P  <---------LBD16      --------->ALFIN1   <---------HSFB2a(2)             <---- ->CCA1(1) --------->WOX13(1)--------->ARR14(2) --------->ALFIN1--------->HSFB2a(2)----------->HVH21   caccggaacgaatcaaccaccaccttggcggaatccagcgaaacacagtggtgctgcagctatactcgagaagccgtacgaagacgtgaaactgttctac  18786100  Previous    Next  AGI:  At1g50700.1    Description:  CPK33 (calcium-dependent protein kinase 33); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK9 (CALMODULIN-DOMAIN PROTEIN KINASE 9), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G20410.1); similar to protein kinase [Medicago sativa] (GB:CAA65500.1); similar to calmodulin-like domain protein kinase isoenzyme gamma [Glycin Range:  from: 18785582    to: 18788250    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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