Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ANAC58                       --------->ANAC58                 <---------ANAC46                                              --------->LBD16              <-----------------------TaNAC69(2)                          --------->PCF5           --          ---------->DOF2                                       <---------ANAC58                 ----      --------->HSFB2a(2)                         <-----------GT1      <---------AtMYB61    ---------      <---------HSFB2a(2)                <---------YAB1         <---------ANAC58            --------- -----HVH21--------->DAG2               <---------GLK1(2)  ------>ZmHOX2a(1) <---------LBD16---------   aattccttctgaaaaagctgtgtgcaagaaaaacacttgtctgattcttgattcacttctcctcgggcttgttttggtcccccgatgttgatactcgcaa  18781900       <---------At4g35610                     <------------AtMYB77       <------ZmHOX2a(2)                       <---------HSFC1(2)       --------->CCA1(2)                       --------->HSFC1(2)      <---------AGP1                           --------->DEAR3(2)      --------->ARR14(2)                       --------->HSFB2a(1)      <---------ARR11(3)                      ------->TEIL      --------->AGP1                       --------->ANAC58      --------->ARR11(3)               <------MYB46(1)      <---------ARR14(2)              <---------AtMYB61     --------->GLK1(1)                <---------------AtSPL3     <---------GLK1(1) --------->RVE1(1)   --------->ANAC58                              --------->ICU4 ------->GLK1(2)      --------->ARR11(3)  --------->SPL7                         <---------ANAC46 ----->MYB46(3)       <---------ARR11(3)<---------SPL7                         <---------ANAC46 >ANAC58              --------->GLK1(2)<------MYB83                           <---------MYB52(1) >ANAC58   <---------GLK1(2)          <---------------AtSPL8                 <-------GAMYB  <-------- >ANAC46------>ZmHOX2a(2)          <-----------RAV1(1)                      <-----------RAV1(1)   caatctgagatctgattctgagaaaatctctgaatttgtgttggtacgaaccgtctctgatcatgttcaacacagtctctgttgtgtagcaattttgaaa  18782000                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               <-----                                                <---------DOF5.7(2)                            <-----                                              <<<<<<<<<AtCCA1                                  <-----                                          <---------ANAC58                                     <-----                                          <---------ANAC58                                     <-----                                        --------->ALFIN1                                       <-----                                       <---------MYB52(1)                                      ------                                      --------->LBD16                                          <-----                                    <---------LBD16                                           <------NtERF2                                  <---------ARR14(2)                                          -------                                  --------->ARR14(2)                                         <-------                                 --------->HSFB2a(1)                                        <--------                                 <---------HSFC1(2)                                         ---------                                 <---------HSFB2a(1)     <---------HSFC1(2)                 ---------               --------->ATHB12  --------->HSFC1(2)      --------->HSFC1(2)           --------->SPL7     --------->MYB52(2)         <---------HSFB2a(1)   ---------->DOF2       <-------TEIL  <---------ANAC58     <---------MYB46(3)         ----------->ARR10    <---------WRKY12  <---------WOX13(1) <---------ANAC58    <-------TEIL                --------->HSFB2a(1)<-----------HVH21<---------YAB1 --------->YAB1<--- -YAB1<-------GAMYB       --------->MYB52(1)  <<<<<<<<<AtLHY<---------LBD16 --------->ZAT18<---------   gtctggttcgttgagagtgattgtagaccaagggaagttccggtgcgagttagcgtcaaagcttcggagtttgatagatgcactatcgtaagccgtggcg  18782100      --------->At4g35610      <---------LBD16      <---------At4g35610   <---------At4g35610 --------->REM1(1) ----->At4g35610 ----->ATERF1(1) -----ATERF1(1) ->NtERF2 -----ERF1 -----RAP2.3(1) ----ANAC46 ----ANAC58 ----ANAC58 ----RAP2.3(3) ----RAP2.6(2) ----RAP2.3(2) --->ATERF1(2)                                              --------->ANAC58 ----DEAR3(1)                        <-----------RAV1(1)    --------->ANAC58   <---------At4g35610 -->RAP2.6(3)                     ------>ZmHOX2a(1)      <---------ZAT18       --------->At4g35610 --ATERF1(1)            --------->ANAC58           <---------ARR14(2)       <-------GAMYB -DEAR3(1)              --------->ANAC58      <---------ANAC46    --------->MYB46(3) -->HVH21               --------->ANAC46   <---------DEAR3(1)     <---------ATHB12 >ALFIN1       ---------->DOF2    <----------DOF2  --------->ARR14(2)      <-----------RAV1(1)      - ---NtERF2--------->ARR14(2)  <---------ARR14(2)  <---------CCA1(2)     <---------MYB52(1)  <-------- --HVH21  <---------ARR14(2)  --------->ARR14(2) ----------->ARR10----------->HVH21  --------->MYB46(3)   gcttcatcagcggatttgaaagttccaagccaaatccttttgtggtctgcgtaaatctgggcaccccaatgaccgttctgttgctgaacgactcctttgt  18782200                          <----------DOF2                      ------->GAMYB                     <------------AtMYB77                     --------->MYB46(3)                  <---------ALFIN1                                                                ---                --------->RAP2.6(2)                                                         ---------             --------->ANAC46                      <---------ANAC58                         ---------             --------->ANAC58                      <---------ANAC58                  <---------ANAC58             --------->ANAC58                 --------->STY1(1)                      <---------ANAC46           --------->At4g35610                <---------STY1(1)                      <---------ANAC58           <---------At4g35610            --------->MYB46(3)                       --------->ARR14(2)         --------->HSFB2a(2)         --------->ANAC58                              <---------ARR14(2) ---------->HVH21 --------->MYB46(3) --------->ANAC58         <-------TEIL      <---------ANAC58----- --DOF2  <---------HSFB2a(2)         --------->ANAC46 <----------DOF2           <---------ANAC58-----   acttgacattgccagaagccacaaccgtctttggtgaagacgaaaccactagggcgttttctggttcgtcatcaagtctcatgcgtttcttgagaggcaa  18782300                                                                                           <-------TEIL                                                                                          --------->ARR14(1)       <---------ANAC58                       <------NtERF2                               --------->CCA1(2)       <---------ANAC58                     <---------ANAC46                             <---------ARR14(2)       <---------ANAC46                     --------->DEAR3(1)                  ----------->GT1 ------->DOF2                               <---------DEAR3(1)                <---------ZAT14 >ANAC58                                 <---------ANAC46            --------->ANAC46    --------->ARR11(1) >ANAC58                 <---------ZAT14 <---------ANAC58            --------->ANAC58    --------->ARR14(2) ---->ANAC58 ----------->RAV1(2)     <----------DOF2                 --------->ANAC58  ----------->ARR10 ---->ANAC58------->TEIL --------->ZAT14 <---------ANAC58--------->ATHB12     --------->ZAT14   gaaagagtcgcttgaacctgaagacactgaagtctccgtctttgcgtcgtcgatgttgttcattagaattcaagaaacagagtagtagaaagatacgaga  18782400                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                            ---------->DOF2                                                           <---------AHL20(2)                                                       --------------->AGL15                                                       <---------------AGL15                                                      ===============================================                                                      ----------------->AGL3        <------------CBF             ----------->GT1                          <-----------------AGL3  <---------PCF2    ---------->DOF2  --------->MYB52(1) <------ZmHOX2a(1)----------->TBP  --------->TOE1(2)  --------   gacagagaaagagaagcgaaacaaaacgatgaagaaatatgaggaacagagagagaactatataaagagagcaaatcgtgggagcaaattgtgtttctta  18782500                  <---------ANAC58                  <---------ANAC58                 <---------MYB46(3)                --------->ALFIN1             <---------ANAC58             <---------ANAC58             <---------DEAR3(1)         <---------ANAC58                                   <---------REM1(1)         <---------ANAC46                                <-----------RAV1(1)                   <-----         <---------ANAC58              --------->YAB1<---------------AGL15                  <-------- ====================================================================MADS_MADS              --------- ->TOE2(3)  <---------LBD16           <---------YAB1 --------------->AGL15        <---------YAB1  ---   atcttgttgtttcttgcggtgcttgagtatttatcaagttatcattttccattttctatttgttgtagtttctataatttagctatgagagaaaattatg  18782600                                              <---------ANAC58                                            <---------AHL20(2)                                            <-----------GT1                                         <---------ICU4                                         --------->YAB1                                        <---------AHL20(2)                                        --------->AHL20(2)                                      --------->TOE2(3)                                    <-------TEIL                                 --------->TOE1(2)                                 <---------DEAR3(2)                             <---------ANAC55(2)                                <---------DEAR3(1)          <---------WOX13(1)  --------->ANAC55(2)                                <---------TOE1(2)         --------->ATHB12      <---------ANAC58                                <---------TOE2(2)        <---------YAB1         <---------ANAC55(1) ----TOE2(3)---------->DOF2  <---------ANAC58 --------->ANAC55(2)               <---------ANAC58 -ATHB51   --------->AHL20(2)<---------ANAC58 <---------ANAC55(2)           <---------GLK1(1)  ------ >ICU4     <---------AHL20(2)<---------ANAC46 <---------ANAC58----------->GT1  <-------TEIL --------- ------->DOF2   <---------GLK1(2)<---------MYB46(3)  <---------CCA1(2)   ----------->GT1   --------->DEAR3(1)   gaaagtattgaaattaaagaatttccatgtttcgtcggttcattaattacttgatatatctgattggataaaaaatggaaatacgtgagagagccgctgg  18782700         <---------ANAC55(2)         --------->ANAC58         --------->ANAC58         ----------->GT1         --------->ANAC55(2)    --------->YAB1                                  --------->TOE2(3)   <---------YAB1                                  --------->YAB1  <---------ARR11(3)                            --------->WOX13(1)  --------->ARR11(3)         <---------YAB1   <---------YAB1                        <---------ANAC46 --------->RVE1(1)       <----------DOF2    <-----------GT1                     <-------GAMYB --------->CCA1(1)   <---------TOE2(3)     <---------AHL20(2)                  <---------MYB46(3) ----->GT1           <---------TOE1(3)    --------->AHL20(2)                  --------->ALFIN1<------ >At4g35610    --------------->AGL15--------->TOE2(3)                  <---------At4g35610<---------AHL20(2)   aaaatatcatcaagtaacttattagggttttatgtttaccctaattttatcattcattaacaaaacgtttctcatctcatgtggttgagtatttttttta  18782800  Previous    Next  AGI:  At1g50680.1    Description:  AP2 domain-containing transcription factor, putative. Identical to RAV1-like ethylene-responsive transcription factor At1g50680 [Arabidopsis Thaliana] (GB:Q9C6P5;GB:Q6J9P3); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G51120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66691.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18781269    to: 18782282    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version