Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->TOE2(3)                        <-----------GT1     --------->ANAC58                         <---------ICU4     --------->ANAC58                         --------->YAB1     --------->ANAC46                        --------->ICU4 --->DOF2                                    <---------YAB1                               <---------- >ARR11(3)           <---------YAB1  ---------->DOF2                                 ----------->GT1   gaaacacaagcctcaaaaacattcttcttgacttaaaaaaaaagcttattattacccgattgcattgaagagacaactgttatcagatggtataactctt  18780200     <---------ICU4                                                           ---------->ID1     --------->YAB1         --------->TOE2(3)                            --------->GLK1(2)      -----     <--------ATHB1     <---------YAB1                             <---------ATHB12        --------->TOE2(3)    <---------YAB1     <---------AHL20(2)                        --------->WOX13(1)        --------->YAB1    <---------ATHB12   --------->AHL20(2)                       <---------AHL20(2)         --------->TOE1(3)    --------->ICU4    --------->YAB1                            --------->AHL20(2)        <---------ATHB12 -GT1--------->ATHB12<---------YAB1                            <---------ATHB12  ------>ZmHOX2a(1)   ctcacaatgattccttccatgttattataatctcaaactatttgcattccaaaaaaaaaaactcaattaatcaagaatttgtcctaatcccaatcttaaa  18780300                                                                    --------->ANAC58                                                                    --------->ANAC58                                                              --------->ANAC58                                                              --------->ANAC58                                                         <-------TEIL                                                        <------ZmHOX2a(2)                                                       --------->ARR14(2)   --------->YAB1                                                       --------->AGP1       <---------ICU4                                                 ------>MYB46(1)  ---------->DOF2                   -                      <------ZmHOX2a(2)          ------>MYB83 --------->ANAC46      <----------ID1 <-                  ------>ZmHOX2a(2)   --------->ATHB12 <---------ARR14(2)  <---------YAB1        ---- ----->DOF2--------->ALFIN1        --------->GLK1(2)  --------->At4g35610--------->YAB1    <---------ARR11(3)   aagatgatgaagagtgttgatccgatctaattctaagaatcgattggaaccaaatcagatccataagcaaaagcatcatcatcaaaacaacaagaactat  18780400                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                               ---------->DOF2                                                                        --------->ANAC46                                                                      ------>MYB46(1)                                                                     --------->MYB55(1)                                                                    --------->MYB46(3)                                                                    <---------MYB52(2)                                                                    <---------MYB55(2)        <---------AHL20(2)                                          <---------MYB46(2)        --------->AHL20(2)                                          --------->AtMYB61        --------->AHL20(1)    --------->ICU4                       --------->ANAC58 <------ZmHOX2a(1)            <---------YAB1  --------->ARR14(2)   --------->ANAC58 ----------->GT1       ----------->GT1        <---------ARR14(2)   --------->ANAC46  --------->ANAC58 ---------->GT1      ---------->DOF2<---------GLK1(2)--------->At4g35610--------->ANAC58 --------TOE2(3) --------->DAG2  <---------WOX13(1)  <---------At4g35610--------->ANAC58   <--------- ------>DOF2    ---------->DOF2--------->ATHB12    <-----------RAV1(2)------>MYB83   --------->ANAC58   aaaggataaattttttgcaaaagtaaagtataaagattgattcttgagaatacccagatgaagatgaacaccaaacgcgatgaaagcaaacaacttttga  18780500                                                                   ----------->GT1                                                                  ----------->GT1                                                          <---------ARR14(2)                                                          --------->ARR14(2)               ----------                                                        --------->LBD16                 <---------MYB59                                                       ==============================================                                                       --------------->AGL15            -------------                                                       <---------------AGL15            <------------                                                       --------->HSFB2a(2)              --------->TOE1(3)                                                       <---------HSFB2a(2)              --------->TOE2(3)                                                      <-----------------AG             --------------             <---------ANAC58                         <-----------------AGL2           --------------             <---------ANAC58                         ----------------->AGL2          ------>MYB46(1)             <------MYB83                             ----------------->AGL3          ------>MYB83             <------MYB46(1)                          ===============================================            --------->MYB59                           =============================================== -DOF2---------->DOF2                                 <-----------------AGL3          -------->P   --   atataaaacaaagttgggttcttggttttgaaggaatagactagagagaaacaaaatccagaaatgggaagataaaactcaaaattccaacctaaaaggg  18780600                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                              --------->CCA1(2)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2) ----------->GT1                                                             <---------ARR14(2) >DOF2                                                                       --------->ARR11(3) ===MADS_MADS                                                                <---------AGP1 -->AGL15    --------->MYB46(3)                                   <---------MYB52(1) ---AGL15   <------ZmHOX2a(2)                                     --------->ALFIN1 --->AGL1  <---------ARR14(2)                                    <-------GAMYB<---------At4g35610 --->AG    --------->ARR14(2)                            <-----------ARR10   --------->AGP1 ====MADS_MADS   --------->AtMYB61             --------->MYB59<---------At5g28300  <----------DOF2 ===MADS_MADS------>ZmHOX2a(2)           ---------->DOF2 <---------ARR11(3) <---------GLK1(1) ------->At4g35610         *TSS     ---------->DOF2      --------->ARR11(3) --------->GLK1(1)   aagatgaaaattggatccaccaaaacccaatgtgaatgaaaaggaaagttagataagaagaactcaccgttgggcaagagatctgatttttggaattcaa  18780700                                                                              <---------YAB1                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                            --------->YAB1                                                                           <---------YAB1  <---------DAG2                         <---------ICU4                                   --------->AHL20(1)                         --------->YAB1                 <-------GAMYB>>>>>>>>>>GT-3b    <-----------GT1                        --------->ICU4                 <---------ANAC46   --------->AHL20(2)                   ----------->GT1                     <---------ANAC58 --------->AHL20(1) <---------             --------->YAB1<---------YAB1              <---------ANAC58 <---------AHL20(1) ----------            --------->AHL20(2)               ----------->GT1      ----------->GT1  <----------DOF2 <- ---------->DOF2   --------->YAB1        --------->AHL20(2)     ---------->DOF2--------->YAB1  <-----   aaaaaaagaactaaataaaaatcgtaattatgttcaaaaacaaaaaaatgtaattttgcgttggaacaaagaaaaatattataatcttttttactttttg  18780800                                       <---------MYB52(1)                                      <-------GAMYB           --------->AHL20(2)                             --------->AHL20(1)               <---------AHL20(2)                             --------->AHL20(2)         --------->AHL20(2)                 <---------AHL20(2)                             <---------AHL20(2)         <---------AHL20(2)               --------->YAB1     ----------->GT1         <---------AHL20(1)       <---------YAB1       <---------AHL20(1) -DOF2                      <---------AHL20(2)      <---------AHL20(2)     --------->AHL20(2) ----->AGL15                --------->AHL20(2)      --------->AHL20(2)     --------->AHL20(1)  <----- --------MYB46(3)         --------->YAB1      <-----------GT1--------->AHL20(2)     <-------TEIL<---- ------RAV1(1) <---------GLK1(2)      <---------At4g35610<---------YAB1    <---------AHL20(2)--------   ttggatgttgttaaatagaatttctctaaaataaattttcagttgattttacatttatttttataaaattattcaaatttattaagttcataaataatct  18780900                              <----------DOF2                            <------------------------ANAC81 ----ICU4                  <-----------GT1         <---------YAB1 ------DOF2          <---------AHL20(2)       <----------DOF2               <---------WOX13(1)     -- ->GLK1(2)    ----------->HVH21          <-----------GT1       ----------->GT1<-----------GT1 <------   ttagtaagttttatttgtgacattttttttttcttttcattttttactcttttattcttgagaaattgataaaaactaattgaccagttaacaaatacta  18781000      <---------RVE1(1)                                        --------->ZAT18    <---------ARR14(2)-      <---------CCA1(1)                                        <---------ZAT14    --------->ARR14(2)<     <---------ARR11(3)                                   <---------YAB1         <-------GAMYB    <--     <---------GLK1(2)                             <---------ANAC58              --------------------     --------->ARR11(3)                            <---------ANAC58             <---------MYB46(3)---   ----------->ARR10                   ---------->DOF2    --------->ICU4  --------->YAB1    <-------- ------->YAB1                     <----------ID1  <---------ZAT2    --------->ANAC58        <-------- ---YAB1                    <---------YAB1   --------->At4g35610    --------->ANAC58        <--------   ttgataagattttttggttaagtctttcttcttataaggccaaaagcttctgagcttgtcatgagtaaactagcaatcttggtggttatgcattgcgagt  18781100  Previous    Next  AGI:  At1g50670.1    Description:  OTU-like cysteine protease family protein. similar to hypothetical protein OsI_005843 [Oryza sativa (indica cultivar-group)] (GB:EAY84610.1); contains InterPro domain Ovarian tumour, otubain (InterPro:IPR003323) Range:  from: 18778524    to: 18780627    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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