Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <------MYB46(1)             <---------ANAC55(2)             <------MYB83             <---------ANAC46            --------->MYB59            --------->MYB111(1)            --------->MYB46(2) --------->ATHB51           <---------MYB55(1)  --------->ATHB12        <---------ZAT6        <---------YAB1   <----------DOF2    --------->GLK1(2) ---------AHL20(2)   --------->ARR11(3)                   --------->TOE2(3) -----------GT1      <---------ARR11(3)   <---------At4g35610   --------->YAB1     --------->YAB1 >TOE2(3) <---------MYB52(1)  --------->ICU4            ------->TEIL     <----------DOF2   --------->TOE2(3)   atttacttttgtgttaggtatgagattttggcataattgaactcagcatatcaaattgaacctctataatatgggcttatgggaataagaaaaacttaaa  18751800                                                              <----------DOF2                                                              <---------DAG2           <---------ARR14(2)                  --------->ARR11(3)           --------->ARR14(2)                  <---------ARR11(3)                <---------HSFB2a(2)    <----------DOF2                            --------->AHL20(1)                <---------HSFC1(1)    <---------DAG2                             <---------AHL20(1)                --------->HSFB2a(2)  ------>MYB46(1)                              --------->AHL20(2)         <-----------GT1  ------>MYB83 ------>ZmHOX2a(1)               <---------AHL20(2)   <---------AHL20(2) <---------ALFIN1                   ---------->DOF2        <---------ALFIN1      --------->HSFC1(1)   aacccactttccctatcctgtttagtagaagtatatactaaaggcctaatatattcaggcccaactttatttgatttatctctctagaaaataactaagc  18751900                    <---------ALFIN1                   -------->P                  <---------ALFIN1                --------->LBD16               --------->ANAC58               --------->ANAC58               --------->ANAC46              <---------LBD16        ------>NtERF2                                             <---------At4g35610             <--       --------->ANAC58                                           --------->ZAT2            <--------       --------->ANAC46                                           --------->At4g35610      --------->TOE2(3)       --------->ANAC58                                        <---------At4g35610        -----------     --------->DEAR3(1)                                        <---------ZAT2    ----------->GT1  <--     <---------ALFIN1                                 <---------CCA1(2)       <----------DOF2    ----   cgaagcaccacgcctctccgcaacccctctctctctctctctctctctctctctctctatcttctagctgctgcaaaactcttttgtaaatttcgttaat  18752000                                                   <---------ANAC46                                                   <---------ANAC58                                         <------MYB46(1)                              --------->LBD16      <---------ANAC58                             --------->ANAC46      <---------bZIP60(2) ---------TGA1              <---------LBD16     ----------->TGA1 -MYB52(1)                  --------->TOE1(2)   ----------->HVH21    <-----------GT1 >GT1    <---------ICU4  <-----------GT1 <------MYB83           --------->AHL20(2) ---------HVH21       <---------ICU4    <---------TOE2(3)       <---------AHL20(2) ----->YAB1     --------->LBD16         --------->MYB59  <-----------GT1<----------DOF2   cgtcactctaaaaattcccccaaatttttacccgcgaaaaattaggttttgtgacgttttaatcttttaattttcttttcaaaattttgaagaacaaaaa  18752100                   <----------DOF2           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         --------->ARR14(2)         <---------ARR11(3)         --------->ARR14(3)         --------->AGP1         <---------ARR14(2)         --------->ARR11(3)                                              <------NtERF2         <---------GLK1(2)                                             <---------RAP2.6(2)         <---------ARR14(3)                                           <---------LBD16         <-----------ARR10                                        <----------DOF2        <---------CCA1(2)                                        <---------ANAC58       ----------->ARR10                                         <---------ANAC58          <---------ANAC46    --------->TOE1(3)                                         <---------MYB52(1)        ------>ZmHOX2a(1)    --------->TOE2(3)              <---------GLK1(1)     <---------GLK1(2)     <----------DOF2   aaaaaacctcagatcttccctctttctctcttctagggtttctctctcactcactcactgattcgtttctttcgcggctctctttctctcctctcgtgtt  18752200                               --------->At5g28300                                            >>>>>>>                           ------->TEIL                                                --------->LBD16                           --------->MYB52(1)                                        <---------LBD16                         <---------SPL7                                         --------->ARR14(2)                        <---------REM1(1)                                       <---------ARR14(2)                     --------->ICU4       --------->ARR14(2)                   <---------HSFB2a(1)                   --------->YAB1         <---------ARR14(2)            --------------------->WRI1              --------->ICU4  --------->LBD16                --------->CCA1(2) <---------HSFC1(2)              <---------MYB52(1)   <---------ARR14(2)        --------->At4g35610<---------GLK1(2)>>>>     ------->TEIL <---------ZAT6   ------->TEIL       ---------->DOF2--------->GLK1(2)<---------DEAR3(1)   gagaatggatgtggccattagtgatgatgtaccggtgaatctcgaatcggttgaagaaaagagagatgaagaaactgtggaagaatcgccggtgaagaag  18752300                                                                           <---------ZAT2                                                                       <-------TEIL                                                                      --------->CCA1(2)                                                                      --------->ARR14(1)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     --------->ARR11(1)                                                                    <---------HSFB2a(1)                                                                    --------->HSFC1(2)                                                                    <---------HSFC1(2)     --------->ANAC46                                                                    --------->HSFB2a(1)    --------->ANAC58                                              <---------AtMYB61    ----------->ARR10       --------->ANAC58       <-------MYC3               <---------ANAC46              --------->LBD16          --------->MYB52(1)      --------->O2                <---------ANAC58             <---------ANAC58         ----------->HVH21 --------->ANAC58                 <---------ANAC58             <---------ANAC55(2)      --------->DEAR3(1) --------->ANAC58                <---------LBD16               <---------ANAC58   <---------GLK1(1) --------->ANAC46              --------->ALFIN1               <---------LBD16--------->ALFIN1 >>TBF1------->MYC3 ----------->GT1 <------NtERF2<---------ZAT6<---------ANAC46   --------->GLK1(1) >>>>>TBF1        <------ZmHOX2a(1)--------->LBD16         <----------DOF2 --------->ZAT2------>NtERF2   aagaagccacgttttgatgaggaagtgaatagagtggcggagattgtattggtgttatcggcattgcggaagattcgaggtgggaaacccccgacggaat  18752400                                             <-----------HVH21                                           ------->MYC3                                           <-------MYC3                                     ----------->HVH21                --------->ATHB12                                    <---------WOX13(1)                --------->ATHB51          <----                                   <---------ANAC58               <---------ARR11(3)           <-----                    --------->At4g35610   --------->O2            --------->ARR11(3)        <--------                    <---------At4g35610   <---------O2           --------->YAB1             ---------        ------>ZmHOX2a(2)          <---------ANAC58   --------->ZAT14<---------AHL20(2)     <--------   <---------WOX13(1)             <---------MYB46(3)  <---------ZAT14<---------YAB1         ---------   tggagattgatctaatggtggaagctaaatcgaaattggttgacatgtgtcaagagtttactcccaaggatattattggtgttgatgctattggagctgt  18752500       ===============================HOX2a_HOX2a       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     <-----------ARR10     <---------ARR14(3)     --------->ARR11(3)     <---------ARR14(2)     --------->ARR14(2)     --------->ARR14(3)          <------ZmHOX2a(2)     <---------ARR11(3)        <------ZmHOX2a(1)         ------>ZmHOX2a(1)     <---------AGP1          <---------TOE1(3)      <---------At4g35610 -----YAB1                   <---------TOE2(3)      <---------ZAT2           --------->ANAC58 ------HVH21             --------->TOE1(3)       <---------ANAC58            --------->GLK1(2) -At4g35610             <---------At4g35610<---------TOE2(3)      ------->GAMYB >At4g35610        --------->YAB1===============================HOX2a_HOX2a  --------->ANAC58 -ZAT2================================HOX2a_HOX2a<---------ANAC58--------->MYB46(3) >ZAT2<---------GLK1(1) --------->At4g35610<---------TOE1(3)   <-----------GT1   cattgaagatctcggtttcaatggtaagcttaaggatcagagattagggtttcgagctcctaaattaaccatctctgagaagctatctcttggcaagaga  18752600                                                           <----------DOF2                                                        --------->AHL20(1)                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                        <---------AHL20(1)                                                       --------->RVE1(1)                                                   --------->LBD16                                ---                  <<<<<<<<<TBF1               <---------GLK1(1)                                   ---             <----------DOF2         <---------AHL20(2)--------->CCA1(1)    <--------P            <--          ------>ZmHOX2a(1)     <---------ZAT14--------->ARR14(2)        <---------AtMYB61   --------     ---------->ID1             --------->ZAT14<---------ARR14(2)<-----------RAV1(1) <------ZmHOX2a(1)   aaggtttgtctcctcctttcttcttcaatctcactgcaatttatagacaaatccgaaatatctttatatgttgttttggtagatggaggaattgaaaaag  18752700  Previous    Next  AGI:  At1g50620.1    Description:  PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G20280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38890.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 18752205    to: 18755006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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