Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------AHL20(2)               --------->AHL20(2)            <---------AHL20(2)                        ----------->GT1      ---------->ID1                              <---------ARR14(2) --------->ARR14(2)                          <---------ANAC46 ---->HVH21<---------AHL20(2)              <-----------GT1          --------->GLK1(1) --WOX13(1)--------->AHL20(2) <---------ANAC46   <--------P         <---------GLK1(1)          <-----   ccatatttgtcgattaatttataaaacatgttgtttgtttgtttttaacgggtaactggtgataaaacagaaatctctaaaactctaccgagttatatca  18745400                                <---------YAB1         --------->ATHB12     <---------ICU4        <---------AHL20(2)    --------->YAB1        --------->AHL20(2) --------->YAB1  <---------ANAC55(1)     <---------YAB1                <---------YAB1  --------->ANAC55(2)   --------->YAB1               <---------ARR14(2)                <---------ATHB51  <---------ANAC46   <---------CCA1(1)               --------->ARR14(2)                <---------AHL20(2)  <---------ANAC58  --------->ARR11(3)               <---------MYB52(1)                --------->AHL20(2)  <---------ANAC55(2)<---------RVE1(1)    --------->KAN4(1)      --------->TOE2(3)    <---------AHL20(1)  <---------ANAC58  <---------ARR11(3)    <---------KAN4(1)   <---------GLK1(2)       --------->AHL20(2) ------GT1 <---------WOX13(1)<---------YAB1     ----------->RAV1(1)                  --------->YAB1   cattacttgtttaattggttcagatattatcatcatcatatagaacaatccaccagttatgcctgattcttaaaatcagttataccaaaataattctcat  18745500                           ---------->DOF2                     <------MYB83                     <------MYB46(1)                   <--------P                 <------MYB83                 <------MYB46(1)                 <---------MYB46(3)                --------->MYB59           --------->AHL20(2)           <---------AHL20(2)              --------------->AtSPL3                           ---------           --------->AHL20(1)              --------------->AtSPL8                           <--------           <---------AHL20(1)              <---------ICU4                        ----------->GT1          <---------AHL20(2) --------->ANAC58                                   ----------->GT1          --------->AHL20(2) --------->ANAC58                                  --------->DAG2   ----------->GT1<-------GAMYB           <---------ATHB12       ------->TEIL ---------->DOF2<-------   atagagagaaaaataaatttggttggaactaaagcaaatgacaaatcagtacaacaacgattacatgtatatataacttaaaaagttaaaacaagataat  18745600                                    --------->TOE1(3)                                    --------->TOE2(3)                              --------->YAB1                              <---------ICU4                           ------>MYB46(1)                          <-----------GT1             <----                           ------>MYB83                          <---------ICU4                <-----                        --------->ANAC55(2)   ----------->RAV1(1)--------->YAB1                <----- >ARR11(3)    --------->ARR11(3)    --------->YAB1            --------->YAB1               <--------- -ARR11(3)    <---------ARR11(3) --------->YAB1   --------->GLK1(1) --------->YAB1  --------->AHL20(2) --YAB1   ---------->DOF2<---------MYB59 <---------At4g35610--------->AHL20(2)      <---------AHL20(2)   tgaatggttatccaaagaactctctcacctaataataatcttaagatgccacaaatccaaaaaaaaataatcacaattttgcaaatttaaatactttgct  18745700                                               <---------ANAC58             <------MYB83                      <---------ANAC58        ------------------------>ANAC81             <------MYB46(1)           --------->ANAC58                <----------ID1            --------->MYB59            --------->ANAC46              ---------->DOF2            <---------TOE2(2)       --------->ZAT14         ---------->DOF2  <---------------AGL15  <-----------GT1------------>CBF  --------->ANAC58 ------DOF2 <---------TOE1(2)      <-----------HVH21      <---------ANAC55(2) ----ANAC58 --------->MYB111(1)  <---------ANAC58         --------->ANAC46 ----ANAC58<--------P  <-----------GT1 --------->ANAC58   --------->ANAC58 -DOF2     <---------MYB55(1)    <---------ANAC58      <------ZmHOX2a(2)   ---------->DOF2          -   ttgtctattcttggtaggttttgtttttctctcttccgttcacacaatttcttggcgatcacgaaagacaaaaaagaaaaagaagaaaacaagagatttc  18745800                                  ---------->DOF2                               --------->ANAC58                               --------->ANAC46                               --------->ANAC58                               ------->GAMYB                               --------->RAP2.6(2)                               --------->TOE2(3)                              --------->MYB46(3)                             <---------At5g28300                            --------->ARR14(2)                            <---------ARR14(2)                           ----------->HVH21                      <---------ANAC58                        ------->MYC3                              <---------ANAC58                        ------->MYC2                              <---------ANAC46                        <-------MYC2                              <---------ANAC55(1)                        <-------MYC3               --------->ARR14(2)                       <---------ANAC46            <---------ARR14(2)                     <----------     --------->YAB1    <---------ANAC58           <------ZmHOX2a(1)   ----------->HVH21   --------->GLK1(2)    <---------ATHB12   <---------ANAC58--------->LBD16    <---------DOF5.7(2)         >>>>>>>>>TBF1   *TSS              <---------ANAC58 --------->ANAC58   <---------ARR14(2)--------->ANAC58   -------  --------->WOX13(1) <---------ANAC58 --------->ANAC46   --------->ARR14(2)--------->ANAC58   ------- ----------->CBF     <---------ANAC46 --------->ANAC58  --------->DOF5.7(2)--------->ANAC46  <-------   acatcaatcaaatcgattccattgcgcgtgtaaccgcaatgcgcaattgggaggacccgtttacgcttgcgtgtaacacggccttgaagaagaatctacc  18745900                                                                    --------->ARR14(2)                                                                  --------->LBD16                                                                 <---------ANAC46                                                                <---------LBD16                                                         --------->MYB55(2)                                                         <---------MYB46(3)     --------->ARR14(2)                                                        <---------AtMYB61       <---------ARR14(2)                   <----------DOF2        ------>NtERF2<---------MYB52(1)       <---------GLK1(2)                  <---------ICU4        <---------MYB52(1)<-------GAMYB     <-------TEIL -ARR10          <---------YAB1      <---------LBD16  <---------At4g35610--------->At4g35610 >TEIL      --------->YAB1 <---------ANAC58           <---------ZAT2<---------ARR14(2) ->P        <---------ICU4 <---------ANAC58         <-----------RAV1(2)<-----------RAV1(2) ----GT1 --------->YAB1    <---------ANAC46<------NtERF2--------->ALFIN1 <---------At4g35610     ----   ttcttgcattttcatcatcatctttatcagcgtgttatgtccggtggcaatgtctcaggtggttgtgccggattcagatgcagattgtctcttgcgattc  18746000                                                                                        <----------DOF2                                              --------->YAB1                     <------MYB46(1)                                       <-------TEIL                              <---------ANAC58                                      <------ZmHOX2a(2)                          <---------ANAC46                                     <---------ARR14(2)                          <---------ANAC58                                     --------->ARR14(2)<-----------HVH21         <------MYB83   -----     --------->TOE2(3)     <---------ANAC46   <---------ICU4                    <---------AtMYB61   <-------TEIL            <---------ANAC58  <---------YAB1                     <---------MYB46(3)  --------->CCA1(2)        <---------ANAC58--------->YAB1  --------->ANAC58     --------->MYB46(2) ------>DOF2          <---------GLK1(2)------>ZmHOX2a(2)   --------->ANAC58     --------->MYB111(1)   aaagatacattagcaaatggttcagaatttcgtagttgggatccattatcatcaccatgtcaaggaaatacagcaaattggtttggtgttctttgtagca  18746100      <---------LBD16                 --------->LBD16                        --------->TOE2(2) <---------ANAC55(1)                 <---------LBD16                         --------->TOE1(2) <---------ANAC55(2)                -------->ZAP1                          --------->GLK1(2) <---------YAB1                   <---------WRKY18(1)                      --------->ARR14(2) <---------ANAC58                --------->WRKY12                          <---------ARR14(2) <---------ANAC46                --------->WRKY38(1)                      <---------GLK1(2) <---------ANAC58                ----------->HVH21                   <---------ATHB12        <-------TEIL ---->WOX13(1) --------------->AGL15<---------LBD16          <---------MYB46(3)      --------->YAB1   attacgtttggggattacaacttgagggaatgggtttgaccgggaaactaaacctcgacccattggttccaatgaagaatctgcgaaccataagcttcat  18746200                                                                                         <---------GLK1(1)                                                                                         --------->GLK1(1)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                       <----------TaMYB80                                                                                  --------->LBD16   <                                                                                 <---------LBD16 <---                                                                                <---------LBD16<-----                                                                                <---------ANAC46 ----                                                   <---------ARR11(3)          <---------LBD16-------                                                   --------->ARR11(3)       <----------DOF2 <--------       --------->TOE2(3)                          --------->GLK1(1)        <---------MYB52(1)--------    <---------ARR11(3)                       <---------At4g35610       --------->MYB52(1)--------->CCA1(2) --------->YAB1                              --------->At4g35610      <-----------GT1 ----------->ARR10   gaacaataacttcaatggcccaatgcctcaagttaagaggtttacttcgctgaaatctttgtatttgtctaataaccggttttcgggggagatacccgca  18746300  Previous    Next  AGI:  At1g50610.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G20190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43973.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 18745803    to: 18748393    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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