Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                    <----------DOF2                                               <--                     --------->ANAC58                                                            <---                     --------->ANAC46              ------->TEIL                                  ----                     --------->ANAC58    <---------At4g35610                                     <---       <------ZmHOX2a(1)---------->DOF2  --------->At4g35610     --------->GLK1(2)               ----   attctctaaggacttggctatctaagcaaagtcaaactctttctgctgtgatgaacttgttcatgaaattctattgcaaagactagaaatgagaaccaat  18733700                              <---------ARR11(3)                                         --------->ARR14(2)                              --------->ARR11(3)                                         <---------ARR14(2)                             <---------RVE1(1)                                         ------->GAMYB      --------->GLK1(2) --------->At4g35610                                           --------->MYB46(3) ---------TOE2(3)       <---------At4g35610                                         --------->MYB52(1) -------AHL20(2)   <-------TEIL              --------------->AGL15          ------>ZmHOX2a(1) ------AHL20(2)  --------->ARR14(2)          --------->TOE1(3)          <---------ARR14(2) ----->AHL20(2)  <---------ARR14(2)          --------->TOE2(3)          <---------ARR11(3) ------AHL20(1)  <---------GLK1(2)          <-----------------AGL1      --------->ARR14(2)       <--- ----->AHL20(1)----------->ARR10          <-----------GT1 --------->REM1(1)--------->TOE2(3)  <------   ttaatgaaattctaactcagattcgaagcagagattttagtatgttacctcaaatgggctacttctctcaacaaaatcctcagacttaacagacctgcac  18733800                                                                        ---------->DOF2                                                                     <-----------HVH21                --------->KAN4(2)                               <----------DOF2                 <----               <----------TaMYB80                            ------>ZmHOX2a(2)                  <----         --------->ZAT2        --------->YAB1               <---------GLK1(1)                   <----         <---------ZAT2--------->MYB52(1)                   --------->GLK1(1)               <--------         <---------At4g35610  --------->ICU4               --------->ARR11(3)     <---------ANAC58         --------->At4g35610 <---------KAN4(2)             <---------ARR11(3)     <---------ANAC58 -------DOF2  <---------ARR14(2)       --------->TOE1(3)   <---------AGP1        <---------STY1(2)<-- ---ALFIN1    --------->ARR14(2)       --------->TOE2(3)  <---------CCA1(2) --------->ARR11(3) <-----   tttagagctcgagctgaatatgccctaatggaatgatcaaacctcaaattcagagaaattggatctctttctgtcaaagagctagcgagtttttgtgttg  18733900                                                                                              -------                                                                                              ------>MYB46(1)        --------->ARR11(3)--------->ARR14(2)                                                  ------>MYB83   <------ZmHOX2a(1) --------->GLK1(2)                                                      --------- --MYB46(1)       <---------KAN4(2)                                                         <-------- --MYB83<---------ARR11(3)<---------ARR14(2)                                               --------->ANAC58 -----MYB46(3)   --------->YAB1                                                            --------->ANAC58 ---RAV1(1)   --------->HSFB2a(2)           ----------->RAV1(1)    <---------GLK1(2)  --------------- -------REM1(1)  <------ZmHOX2a(1)     --------->GLK1(1)         <---------YAB1    <---------At4g35610 ----AtMYB61  <---------HSFB2a(2)     <------ZmHOX2a(1)   <---------ALFIN1    <-----------------AGL3   gtgaaggagacatcttcgaggataatcggaaactccatgaggaatccaacatcgaaacccccattttctgattctcacttccttcaactgggtacccaac  18734000                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   --------->AGP1                                   <---------ARR14(2)                                   --------->ARR11(3)                                   <---------ARR14(3)        <---------AHL20(2)                                   <---------AGP1          <---------AHL20(2)          <---------At4g35610                                   <---------ARR11(3)   <---------AHL20(2)             --------->At4g35610 ---->RAV1(1)                      --------->ARR14(3)   <---------AHL20(1)           <--------P >MYB46(3)                         --------->ARR14(2)   --------->AHL20(1)   *TSS   <---------MYB52(1) -MYB59                       --------->AHL20(2)       --------->AHL20(2)    <-----------HVH21 >AtSPL8               ----------->GT1           ---------->DOF2  <-----------GT1<---------LBD16   aaaactactctcaggctctctcaaattgtcaatttaagatcttgacagacaaaaagattatatttttatctccgttcaacttcaccggtagctccatgac  18734100                                                         <---------GLK1(1)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                    <-------MYC4                                                    <-------MYC2                                                    ------->MYC4                                                    <-------PIF5                                                    ------->PIF5                                                    ------->MYC2                                                    ------->MYC3                                                    <-------MYC3                                                   --------->ANAC46                                                   --------->TGA1a                                                   <---------TGA1a                                                   --------->O2                                            --------->ATHB12          ---------->DOF2    --------->TOE2(3)     <---------O2      --------->ANAC58      <--------HAHB4  -------->ATHB1      --------->ANAC46      --------->YAB1  --------->YAB1                  <---------YAB1      --------->ANAC58     <---------YAB1   <---------ICU4              ----------->GT1    <---------ALFIN1     --------->YAB1     <--------HAHB4    ------>ZmHOX2a(1) --------->ANAC46     =======================================bZIP_DOF  ----------->GT1             -- --------->PCF2       <----------DOF2      --------->ICU4--------->GLK1(1) --------->AHL20(2)   <----   tatgccccactccaaagcatagggcttttatcattaactaatagaatcattacacgtggatttcctattccaactgttaaaattggattttgagcattga  18734200                                             --------->YAB1                                   <------                                            --------->AHL20(2)                                <------           ----------->GT1          ----------->GT1             ---------->DOF2            <---------     <---------ICU4              --------->MYB52(1)          ----------->GT1            <---------ARR11(3)    <---------YAB1  --------->YAB1 --------->ZAT6           --------->ZAT6 ------>ZmHOX2a(2)  <------ ------->CCA1(2)   <---------AHL20(2)       <---------AHL20(2)--------->At5g28300       --------->ARR11(3) -----TOE2(3)      --------->AHL20(2)--------->At5g28300  --------->MYB52(1)      <---------AHL20(2)   gatttgattatttcagtaaaatttataatgcaagttaacagtaaaatttataatgcaagttaacagtaaaacactgatctatattttaaagatttgttgt  18734300                                               ------------>CBF                                              --------->ANAC58                                              --------->ANAC58                                             --------->WOX13(1)                                            ---------->DOF2                                      --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58                                     <-------PIF5                                     ------->PIF5                                     ------->PIF4                                     ------->MYC3                                     <-------MYC4                                     ------->MYC2                                     <-------MYC2        --------->ANAC58             <-------MYC3   --------->YAB1        --------->ANAC58             <-------PIF4--------->WOX13(1) -----RAV1(1)                    <------NtERF2--------->ANAC46 ---MYB46(3)               <-------MYC3    <---------ATHB12               <---------AHL20(2) --RAV1(1)              <---------ALFIN1 --------->WOX13(1)        --------->At4g35610             <- ---REM1(1)<----------DOF2 ------->MYC3------------>CBF            <---------At4g35610       --------   tgcaacttgcaagctttatacattcaacacatggtggcacatgcaatcaagcaattagcacctaaacacagcttaaataatcccacttaatatttaagac  18734400                                 <---------ATHB12                                 --------->MYB46(3)                                -------->P                               ------------>CBF                            --------->ANAC58                           <---------WRKY12     --------->AHL20(2)     --------->ANAC58            ----------->GT1<---------WRKY38(1)   <----------DOF2         --------->DAG2             ---------->DOF2 --------->WRKY18(1) --------GLK1(2)          ---------->DOF2 --------->HSFB2a(2)    --------->DAG2               ------- ->ANAC46            ---------->DOF2      <---------HSFB2a(2)   ---------->DOF2  ---------->ID1   acattcttttaatatcaactacacaaagaaaagcaaccattcttctataacttgagtaaagaaaaaaaaagggtcaacaatttggctctcttgaagaaat  18734500                                                                        --------->MYB46(3)                                                                        <---------MYB111(2)                                                        <---------ARR11(1)           ---------->DOF2                                                        <-----------ARR10------->GAMYB                                                        --------->ARR11(3)     <---------At4g35610                                  <------MYB83          <---------ARR11(3)     --------->ZAT2                                  <------MYB46(1)       <---------ARR14(2)     --------->At4g35610                                 <---------AtMYB61      --------->ARR14(2)     <---------ZAT2                       ------->TEIL            <---------YAB1           <---------MYB55(2) <------ZmHOX2a(2)  --------->ANAC55(2)      <---------At4g35610      ----------->RAV1(1)<-----------HVH21 -->CCA1(2)    <----------DOF2   --------->MYB59       <---------CCA1(2)<---------MYB52(2)       <---   gggatcaaaatttcatgcttttatgtatccatggtttggttttggtcatatgattccatatcttcatttagccaacaaactagctgagaaaggtcatagg  18734600  Previous    Next  AGI:  At1g50575.1    Description:  lysine decarboxylase family protein. similar to putative lysine decarbxylase [Nicotiana tabacum] (GB:CAO91858.1); contains InterPro domain Conserved hypothetical protein CHP00730 (InterPro:IPR005269) Range:  from: 18732387    to: 18734077    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g50580.1    Description:  glycosyltransferase family protein. similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G29630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63555.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 18734499    to: 18735845    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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